KEGG   Geospiza fortis (medium ground-finch): 102045573
Entry
102045573         CDS       T03755                                 
Symbol
NBN
Name
(RefSeq) nibrin
  KO
K10867  nibrin
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr03440  Homologous recombination
gfr04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    102045573 (NBN)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    102045573 (NBN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gfr03032]
    102045573 (NBN)
   03400 DNA repair and recombination proteins [BR:gfr03400]
    102045573 (NBN)
DNA replication proteins [BR:gfr03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    102045573 (NBN)
DNA repair and recombination proteins [BR:gfr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     102045573 (NBN)
    BRCA1-C complex
     102045573 (NBN)
SSDB
Motif
Pfam: Nbs1_C NIBRIN_BRCT_II FHA BRCT RTT107_BRCT_5 Yop-YscD_cpl PTCB-BRCT Microp_apicomplexa_4 Dsl1_N
Other DBs
NCBI-GeneID: 102045573
NCBI-ProteinID: XP_014163259
LinkDB
Position
Un
AA seq 750 aa
FPGEPYRLLSGVEYVVGRRNCTILIQDDQSISRSHAVLTVSRPEVSPSQSLTVPVLTVRD
TSKYGTFVNGSKLNGASVSLQSGDRINFGVFESKFRVEYEPLVVCSSCLDVAQKNALNHA
IQQLGGLVVNEWTIECTHLVMVSVKVTVKTICALICARPIIKPEFFSELIRAVQSRQQLP
NHVSFYPPVDEPSIGSENLDLSEHHERKKIFNGKTFVFLTAKQHKKLGPAVVLGGGEVKL
MTEGRKEMPLLLSPEVCVVDVGLANSQMSGFDSMTNWTDSILTDLESKNLRTIPEAEIGL
AVIFMSTEKYCNPQKQPASKAAPESSASAVAGRAISQNLAVDETIMPTAADSSTLYIADT
EEQTCMEIENTSQVHRQRKMAFQDTTGKKSSGVSGSVNAGTSIPRGNRTSGFSQRSQPVS
PSKIPEAGKPRESASCHPNSITNYFPISRKRXXXXXXXXXSVPKIAKLEERSSPLPKSTE
STTSLICNSEAKQHQKKNNILDPNSNFAEDMGMKPMRESVKLTSDRTDTKTTSRENHAPK
KRKELDDLSEDTEALEIVFGSGDIDWEDQMADHDQEAQRSKRKKRCLEAKGSGIPEVTVN
QQEENKVLIEEELGSVLTSEMKTNIKQESSVLMKNHSKLQDDCSNIPSRLLLTEFRSLVV
SHPRQNSHLPGNNSYGGKKNFKMFKKVAYPGAGQLPHIIGGSDLIAHHAKKNSELEDWLR
QEMEEQNRHAREESLADDLFRYDPNVKRRR
NT seq 2253 nt   +upstreamnt  +downstreamnt
tttccaggagagccctatcggcttttaagcggtgtagaatatgttgttggacgcaggaac
tgcacaattttaattcaggatgatcagtctatcagccgaagtcacgcagttctgaccgta
agtcggcctgaagtaagccctagtcagtctctcacagtacctgtattaacagtaagagat
acatccaagtatggcacttttgttaatggatcaaaactcaatggtgcttcagtgtctttg
cagtctggtgacagaatcaactttggagtctttgagagcaagtttagagtggaatatgaa
cctttggttgtctgctcctcatgtttagatgtagctcagaaaaatgccttaaatcacgcc
atccagcagcttggaggccttgtagtgaatgaatggacaatagaatgtacccaccttgta
atggtatcagtaaaagttactgttaagactatatgtgctttgatttgtgctcgaccaatt
ataaaaccagagtttttttctgaattaataagagctgttcagtccaggcaacagttgcca
aatcatgtaagtttttatcctccagttgatgagccttccattggcagtgagaacttggat
ttatctgagcatcatgaaaggaaaaaaatattcaatggaaaaacttttgtatttctaact
gccaagcagcacaagaaactgggtccagcagttgttcttggaggaggggaagtaaagttg
atgacagaaggaagaaaagaaatgcctttactactttctcctgaagtttgtgtagttgat
gtgggtttggctaactctcagatgtcaggattcgactctatgacaaactggactgattcc
attctgactgacttggaaagcaagaatcttaggactattccagaggcagaaattggattg
gcagttatcttcatgtctacagaaaagtactgcaaccctcaaaagcagcctgcttccaaa
gctgcacctgaaagttctgcatcagctgtcgcaggccgagcgatttcccagaatctggct
gtggatgaaaccataatgccaactgctgcagatagtagcaccttatacatagctgataca
gaagagcagacatgtatggagatagagaatacttcccaggtgcatagacaaaggaaaatg
gctttccaggatacaactggaaagaaaagcagtggcgtaagtggcagtgtaaatgcagga
acatcgatacctagagggaacagaacatctggattcagtcaaagaagtcagcctgtctca
ccatctaaaattccagaagctggcaaacctcgtgagagtgcttcatgtcatccaaactca
attacaaattacttcccgatttccagaaaaaggnnnnnnnnnnnnnnnnnnnnnnnnnnn
tctgtacccaaaatagcaaaattggaggaaaggtcatcacctcttcccaagagcactgaa
tctacaacttcattgatctgcaatagtgaagcaaaacagcatcaaaagaaaaataacatc
cttgacccaaattcaaattttgcagaagacatgggtatgaagcctatgagggaaagtgtc
aaactaacaagtgatagaacagacactaaaaccacttctagagaaaatcatgcaccaaaa
aagagaaaggaattagatgatttatctgaagatacagaagcactagaaattgtgtttgga
agtggagacatagactgggaagatcaaatggcagatcatgaccaggaagctcaaagaagt
aaacgaaaaaagcgatgtttggaagccaaaggaagtgggattccagaagtgactgtgaat
cagcaagaggagaataaagtattgatagaagaggaacttggatcagttctaacttcagaa
atgaaaactaatatcaagcaggagtcttcagtcttgatgaagaaccacagcaaactgcaa
gatgactgcagcaatattcctagcaggcttctcttgacagagtttaggtcactggttgtc
agccatccaagacagaacagtcatctccctggaaataacagctatgggggaaagaaaaat
ttcaaaatgttcaaaaaggtagcttaccctggggcaggacaacttccacacattattgga
ggatcagatttgattgctcaccatgctaaaaagaattccgagctagaagactggttaagg
caagaaatggaggaacagaaccgacatgcaagagaagaatcacttgctgatgatctcttt
agatatgatcctaatgtgaaaagaagaagataa

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