Geospiza fortis (medium ground-finch): 106631968
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Entry
106631968 CDS
T03755
Symbol
PRDM2
Name
(RefSeq) PR/SET domain 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr00310
Lysine degradation
gfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
106631968 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfr03000
]
106631968 (PRDM2)
03036 Chromosome and associated proteins [BR:
gfr03036
]
106631968 (PRDM2)
Enzymes [BR:
gfr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
106631968 (PRDM2)
Transcription factors [BR:
gfr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
106631968 (PRDM2)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
106631968 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-H2C2_2
zf-C2HE
zf-C2H2_11
zf-MYST
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
106631968
NCBI-ProteinID:
XP_014165156
LinkDB
All DBs
Position
Un
AA seq
1413 aa
AA seq
DB search
MRDSKEGHKEEDETPSVSAVLSLEQTAVIQEMVNQDVLPKLMIPSPTNETQVVTEDKQGE
AINCASDDLDDDEEEDEEEEDEEEIEDSNMPKENAEMPLICEEKLDSMEEQKSTSEESPE
SSPKKKLVVKIPKAEGESNGDVQETFMFPCQHCERKFTTKQGLERHMHIHISTLSHAFKC
RYCGKAFGTQINRRRHERRHEAGPKRKPFLTLTSSQHLDNVADNQVIVDDGLKDDLNVSS
LVQDSVVLDSEKVSQEMSNSAFAEENKEPKELHPCKYCKKVFGTHTNMRRHQRRVHERHL
IPKGVRRKGFFTEEPPLPTEPAPAVQSVYTASTEIEEEGEGDDVYLMDISSNISENLNYY
IDGKIQSNSNTSNCDVIQMESNSADLYGLNCIISPVTVEISTNLKVTQTHVNEPPKEPSS
SGSSESKKRRTASPPLVPKIKTEIDPEPITPTSSLNLPLSISTESLPFHKEKGVYLSSKL
KQLLQTQDSKKITPSSEIPKIGPSVTSSSVLPPVSSRFKRRTSSPPSSPQHSPVLRDFVK
SGEGRTVWNDNIRSSKMPKLESHSNSPAWSLTGREDKETLSPHCFEEYKISKDWTAAPTF
GNVCNQQPLDLSSGMKQRSDVKSKTQVPWESVLDLSVHKKPCSDAEIRECKENSTHATCS
GVKKKKPTTCMLQKVLLNEYNGTDAALEQPGTPPLLPPPNPPSPPPCLPVLTVATSPPPL
LPPMPLPIPDVSASATNTSSCPSPLSNTTTQSPLPVLSPTVSPSPSPVPSVEPLISAASP
GPPTLSSSSSSSSSSSFSSSSSSSSPSPPPLSVVSSVVSSADNLESSLPIIKQEEAESEQ
QKAREEPHTSSESGVVQETFNKSFVCNVCESPFLSIKDLTKHLSIHAEEWPFKCEFCVQL
FRDKTDLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHPDKECTHHEFESGTLR
PQNFTDPSKANAEHMQNLPEDSLEPSKEEEDEDLNDSSEELYTTIKIMASGVKSKDPDVR
MGLNQHYPSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQTFTTAIRCTKCGKSVDNMPEL
HKHILACASASDKKRYTPKKNPVPLKQTVQPKNGMVVIAGPGKNAFRRMGQPKRLNFNVE
ISKMSSNKLKISALKKKNQLVQKAILQKKKSAQQKAELKNNPSETDSHICPYCNREFTYI
GSLNKHASYSCPKKPISPSSKKNSSKKSAASSPANSDKGSNQRRRTADAEIKMQSTQPHL
GKTRARTSGPAQLQLPSASFKSKQNVKFVPSMRSKKPNSSSSLRNSSPVRVSKMSHVDGK
KTKVVSKNNSSGISSKASRKLHVRIQRNNKAVLPSKSAVASKKKADRFSVKSRERIGGPI
TRSLQQAANAEAAENKRDESSTKQELKDFRNLL
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgagggattctaaagaaggtcataaagaggaagatgaaactccttctgtttctgctgtg
ctgtctctggaacaaacagctgtgattcaggagatggtaaatcaggatgtccttccaaag
ctgatgatccccagtcccaccaacgaaacacaagtggtaactgaagacaaacaaggagaa
gccataaactgtgcatcagatgatttagatgacgatgaagaggaggatgaagaagaggag
gatgaagaggagatagaagatagcaatatgcctaaagaaaatgctgaaatgcctttgata
tgtgaagaaaagttggactccatggaagaacaaaagagtacatcagaggaatctccagaa
agctctccaaagaaaaaactcgtggtgaaaattccaaaagcagagggggaatccaacggt
gatgttcaggaaacattcatgtttccttgccagcattgtgagaggaagtttacaacaaag
caaggactcgagcgccacatgcacatccacatctccaccctgagccacgcgttcaagtgc
cgctactgcgggaaagccttcggcactcagatcaacaggcgcaggcacgagcgacgccac
gaggccgggcccaaaaggaaaccattcctcacactgacctcctcacaacacttggataat
gttgctgataaccaagtgattgtggatgatggtcttaaagatgacctgaatgtttccagt
cttgtgcaggactctgttgtcttggattctgagaaagtttcccaggaaatgtcaaactcc
gcgtttgccgaggagaataaggagcccaaagaattgcatccgtgcaaatactgcaagaag
gtttttggtactcacaccaacatgaggaggcatcagcgtagggttcacgagcgtcatctt
attcccaaaggtgtcaggagaaaagggttcttcactgaagagccacctctcccaacagag
ccagccccagcagtccagagtgtgtacacagcgagcacagaaatagaagaggaaggtgaa
ggagatgatgtctatcttatggatatatccagcaatatctctgagaatttaaattactat
attgatgggaaaattcagtccaacagcaacactagcaattgtgacgtgattcagatggag
tccaactctgcagacttgtatggattgaattgtataatcagtccggtcacagtggaaatt
tccacaaatttaaaggttacacaaacacatgtgaatgaacctcctaaggaaccctctagc
agtgggagcagtgaatcaaaaaagagaagaactgccagccctcctcttgtaccaaaaata
aaaactgaaatagacccagaacctataactcctactagttctttaaatcttcctcttagc
atttcaacagaaagcttaccttttcataaagaaaaaggggtttatttgtcatcaaaatta
aagcagcttcttcagacacaggacagtaagaagataactccatcaagtgaaatccctaaa
ataggaccttctgttacatcatcatctgttttgcctccagtatccagcaggtttaaaaga
aggaccagctctcctcccagctctccacagcacagtccagtgcttcgagactttgtcaaa
tcaggtgagggaagaactgtgtggaatgataatattaggagttcaaaaatgccaaagtta
gaaagccacagcaactcacctgcttggagcttgactggaagggaggacaaagagactttg
agccctcattgctttgaagaatataaaatatcaaaagactggacagcagctccaactttt
ggcaatgtgtgcaaccagcagcccctggatttatccagcggtatgaaacaaaggtctgat
gtcaaaagcaagactcaggttccctgggaatctgttttagatctgagtgtgcataagaag
ccttgcagcgatgctgaaattagggaatgcaaagaaaactccacacatgcgacatgcagt
ggtgttaagaagaagaagcccaccacgtgcatgctgcagaaggttctgctgaacgagtac
aacgggacggacgcagccctggagcagccgggcacgcccccgttgttaccgccccccaac
cccccctccccgccgccctgcctgcccgtgttaactgtggccacgtcgcctccccccctg
ctcccacccatgcccttacccattccagatgtctctgccagtgccactaacacctcctcc
tgtccttcaccactctccaacactactacccagtccccactaccagttctttcacctaca
gtttctccttctccatccccagtcccttctgttgaacctcttatttctgctgcttcacct
ggcccccctacactgtcttcctcatcttcctcctcctcttcctcctctttctcatcctct
tcctcctcatcgtctccatctccacctcctctttctgtggtttcttctgttgtttcctct
gctgataaccttgaaagttctctcccaataataaaacaggaagaagctgaaagcgagcag
cagaaagcgagagaagagcctcatacttcaagtgaatcaggagtagtgcaggaaaccttc
aacaagagctttgtgtgcaatgtctgcgaatcaccttttctttccattaaagacctaacg
aagcatttatccattcatgctgaagaatggcccttcaaatgtgaattctgtgtacagctt
tttagggataaaacagacttgtcagaacatcgctttctgcttcatggagtagggaatatc
tttgtttgttcagtgtgtaaaaaggaatttgcttttttgtgcaatttgcaacagcatcaa
cgggatctccatccagacaaagagtgcacacatcatgaatttgaaagtgggactttgaga
ccccagaattttactgaccccagtaaggcaaatgcagagcacatgcagaacctgccagaa
gattctttggaaccttcaaaagaggaggaagatgaagatctaaatgattcttctgaagag
ctttatactactataaaaataatggcttctggagtgaaatctaaagatccagatgtccgt
atgggcctcaatcaacactacccaagctttaaaccacctccgttccagtatcaccatcgt
aatcctatggggattggagttactgcaacaaacttcacaacccataatatcccacagact
tttactactgccattcgatgcacaaaatgtggcaaaagtgttgataacatgcctgagtta
cacaaacacatactggcctgtgcatctgctagtgataaaaagagatacacacccaaaaaa
aatccagtccccctgaaacagacagtgcagcctaagaatggcatggtggtcattgctggg
cctgggaagaacgccttcagacgaatgggtcagcctaaaagactcaatttcaatgtggag
attagcaaaatgtcctccaataaactaaaaataagtgcattgaaaaagaaaaaccagctc
gtacagaaagctatcctgcaaaaaaagaaatctgctcagcagaaggcagaactgaaaaat
aacccatccgagacagactctcacatctgcccctactgtaacagagagttcacttacatt
gggagtttgaacaagcacgcatcatacagctgccccaaaaaacccatctctccctcctcc
aaaaagaattcttccaaaaaaagtgcagcttcttcacctgcaaacagtgacaaaggcagc
aaccagcgcaggcgaacagcggacgcagaaatcaaaatgcagagcactcagcctcacctg
ggcaagaccagagcacgaacctcaggacctgcacagctccagctcccttctgcctccttc
aaatccaaacaaaacgttaaatttgtaccttccatgcgatctaaaaagccaaattcatct
tcatccttgaggaactctagtcctgtaagagtgtctaaaatgtcccatgttgatgggaaa
aaaactaaggtggtttctaagaacaattcctctggaatctccagcaaagcctcccggaaa
ttgcacgtcagaatacaaaggaataataaagctgttttgccaagtaaatctgctgtggca
agtaagaaaaaggcagacaggttcagtgtaaaatctagagagaggattggaggaccaatc
acacggagtctgcagcaggcagcaaatgcagaagcagcagaaaacaaaagagatgaaagc
agtacaaagcaagaactgaaagatttcaggaatctcctgtaa
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integrated database retrieval system
