Geospiza fortis (medium ground-finch): 106631996
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Entry
106631996 CDS
T03755
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106631996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gfr03021
]
106631996
03036 Chromosome and associated proteins [BR:
gfr03036
]
106631996
Transcription machinery [BR:
gfr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106631996
Coactivators
SAGA/TFTC/STAGA complex
106631996
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
106631996
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
106631996
NCBI-ProteinID:
XP_014165581
LinkDB
All DBs
Position
Un
AA seq
700 aa
AA seq
DB search
MPREQRAGAAALAMQRALVLFSKSSETASPLGNCITAAIPVWLGQQLWIPIVAPQLIVRP
PPQTTIQLPPGFTIPPGMVLVRTDAGQLVMVPQQALAQAQMQAQVQTQGQGPANMSPRLS
VPTTGPVFRLSTAQPTSVGTSSVRLGLPVQAKVVPSTAVSVATTSAPNLFKTTVASGAAA
SQQPAVLSSAQSQGSGSGQPPGQPRPGSTVVSQEMQENVKKCKNFLATLIKLASHNSPSP
ETSRNVKALVQDLLDAKIDPEEFTGRLQTELKSSPQPYLVPFLKKSLPALRQSLLNSQHL
VLQGQPSQQSLQQTKLSAVIPQSASGIPSVVTTQTIGIRQPNNICTVSVSNTVQPPQVKV
VQSNQSSQLQIIQSTSAQTVKRTPACQTTHIRMPVVITQTIRPQGTVGKAPTIQASKSPG
GFGVQVSANQKNKLNDPGGGSFRDDDDINDVASMAGVNLNEESARIMATNSDLVGTQMQS
CKDEPFLAAIPLHKRILETAKKLGITDVPAEVVTFISHATQSRLRTVIEKVTVITQHRME
SYKDDEWYEQATDVRSQLKFFEQLERLEKQRKDEQEREILLKAAKSRSRQEDPEQARLKQ
KAKEMQQQELAQMRQRDANLTALAAIGPRKKRKLDAPGLLTIGGEGVGLCGGSQAGLGTG
SPRQYPRQKITRVNLRDFIFYMEQEREMSRSLLLYRALLK
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgccgagggagcagcgcgccggggcagctgctctggcaatgcaaagagccttagttttg
ttttccaaatcttctgaaacagcgtccccgttaggaaattgtatcactgcagccatcccg
gtctggctggggcagcagctgtggatcccgatcgtggccccgcagctgatcgtgcggccg
ccgccgcagaccaccatccagctgccgcccggcttcaccatcccgcccgggatggtcctg
gtgcgcacggacgccgggcagctcgtgatggtgccccagcaggctctggcccaggctcag
atgcaggcccaggtgcagacacagggacagggtcctgccaacatgtcacccaggctttct
gtgcccactactggccccgtttttcgcctgtcaacagctcagccaacgtccgtgggcacc
tccagtgtccgcctggggctcccggtgcaggccaaggtggtgccatcaacagcggtatca
gtagctacgacaagcgctccaaatctattcaagacgacggtggcaagtggagctgcagcc
tcccagcagcctgcagtgctcagcagtgcccagagccagggctcggggtcagggcagccc
ccagggcagccgcggccgggcagcactgtggtgtcacaggaaatgcaagagaatgtgaaa
aaatgtaaaaactttttagctacccttataaaacttgcttctcataattcaccatctcct
gaaacgtcccgcaatgtgaaagctctggttcaagatttgttggatgcaaagattgatcca
gaagaatttacaggccgccttcaaacagaactcaaatcatctcctcagccatatcttgta
cctttccttaagaaaagtctacctgcactgagacaatctttactgaacagtcagcatttg
gttttgcaaggccagccgtctcagcagtccctccaacagaccaagctctctgcagtgata
cctcagtctgcctcgggaatcccctctgttgtcaccacacagacaataggaataaggcaa
ccaaacaacatttgcacagtctctgtatcaaatacagtgcagcctcctcaggttaaggtg
gtacagtcaaatcagagttctcagctgcagattatccagtcaacatctgctcaaactgtg
aaacgaacccctgcttgccagactacccacattaggatgccagtggtaataactcagacc
attagaccacaaggcacagtagggaaggcaccaacaatacaagccagtaaaagtcctggg
ggctttggtgttcaggtctctgcaaatcagaaaaacaagctgaatgaccctggaggtggt
tctttcagagatgatgatgacatcaatgatgttgcctctatggctggtgttaaccttaat
gaagaaagtgcccgaattatggccaccaactctgacttggttggaacccagatgcagtcc
tgtaaagacgaaccctttcttgctgctatacctctccataaacgcatacttgaaacggct
aaaaaactaggaattactgatgtgccagctgaggtggttacttttatttcccatgcaaca
cagagcagattaaggacagtgatagagaaggtgacagtgataacccagcaccggatggag
tcgtacaaagatgatgagtggtacgagcaagccacagatgtccgatcccagctgaagttc
tttgagcagttggagcgtttggaaaagcaaaggaaagatgaacaagagagggaaattttg
ctgaaggctgccaagagtcgctcaaggcaagaagacccagagcaagctagactgaaacaa
aaagcaaaggagatgcagcagcaggagctggcccagatgaggcagagggatgccaacctg
acggcgctggcagccatcggcccccgcaagaaacggaagctggatgctcctgggctgctc
accataggaggagagggcgtggggctgtgcgggggcagccaggcggggctgggcacgggc
tccccccggcagtacccccggcagaaaatcactcgagtcaacctcagggacttcatcttc
tacatggaacaggagcgggaaatgagccgttcgctcctgctctaccgagctctgcttaaa
taa
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