Geospiza fortis (medium ground-finch): 106632121
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Entry
106632121 CDS
T03755
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gfr04515
]
106632121
Cell adhesion molecules [BR:
gfr04515
]
Cadherins
Protocadherins
106632121
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
106632121
NCBI-ProteinID:
XP_014166940
UniProt:
A0A6I9ZCH2
LinkDB
All DBs
Position
Un
AA seq
775 aa
AA seq
DB search
RGHCGLCLVFRLPRLRPRSVAGPGCLAAFGIAGRAERQRGLRAAAAAVPLCAQSETCMLP
FELLLSSPLQFFRVEVTLDDINDHSPIFREDRISFRIPETSEPGSRFPLEGARDLDIGSN
TVQAYSISPENEYFSVSYGSHITGKKSLELVLEKLLDREQEAEMSFSVIAVDGGFPSRSG
TTEVKILILDANDNAPKFIQEVYIAKVLENVPEGSVVLTVLATDPDAGVNGDISYQLNEV
VGQIDSAFVIDPIIGEIKLTKPLDFETAHTHELTVRAIDGGGLSAICKVLVEVVDVNDNA
PELVVSSFSSPLPENTVPGTVVALFMVRDRDSGANGKISCALQDQLFFSLRPAYKNYYEL
VTVSALDREETPQYILSVTAADAGSPPLTTTQTFTVDISDVNDNAPIFNQTSYTMYVREN
NVPTVFVGAVSAADADVGLNAKVTYSLAAEQGPERPWCSCISVNSENGHVFVLRPLDYEH
LRQTEVTVSASDAGSPPLRANVTVRLVVLDENDNAPLVLYPAQESSPASSELVPVSAEAG
YLISKVVAVDADSGQNSWLSYHLLRATDPGLFSVGLQSGEVRLRRPVTERDSVKQKLLVL
VRDNGKPPLSATAALSALLLKDFAAVRLPHSSPASEDQAASLTTYLIIALVFVSLLFLIS
TAVLVARKVCRRKELKAGHVLYAADTLQSGPADAAAAGTLPRTYCYEISLTTGSGNSEFR
FLKPILPSLPPQHCAVGQGLEEEQDFPGVPVSTEDMAPDNAGALSAGQFSALSFN
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
cgtggccattgtgggctgtgcctcgtctttcggctgccccggttaaggccgcgttccgtt
gctggccccggctgtctcgctgccttcgggatcgcgggccgggccgagcggcagcgcggg
ctgcgggcggcggcggctgcagtcccactgtgcgcccagtctgaaacctgcatgctcccc
ttcgagctgctgctctccagccccctgcagttctttcgggtcgaggtcactctggacgat
atcaatgaccattctcctattttccgagaagatcgaatcagttttaggatccctgaaacc
agcgagccaggctctcgtttcccactggagggagctcgggacctcgatattggcagcaat
acagtccaggcgtacagcatttctcccgagaacgagtatttcagtgtctcctatggaagt
cacattactggcaagaagtctcttgaacttgttttggaaaagcttctagacagagagcag
gaggcagagatgagtttcagtgttattgctgtagatgggggctttccatccaggagtggc
accactgaagtgaaaattttaattctagatgcaaatgacaatgctcccaaattcatacag
gaggtgtatatcgcaaaggttttggagaacgtgccagaaggctctgtggtactgactgtg
ctggcaactgatccagatgcaggagttaatggggacatctcctatcaactgaatgaagtg
gttggtcagattgactcagcatttgtgattgatcccataattggtgaaattaaactcaca
aaacctctggacttcgagacagcacacactcacgagctcactgtaagagccatagatggt
ggaggcctctcagcaatctgtaaggtgttggtggaggtggtggatgtgaatgacaatgcc
ccagagctggtggtcagttccttcagcagtcccctccctgagaacacagtccctggcaca
gtggttgccctgtttatggtcagggaccgggattctggtgccaacgggaagatctcgtgt
gccctgcaggatcagctcttcttctccctgcggccagcctataagaattactatgagctg
gtgacagtgagcgcgctggaccgcgaggagacgcctcagtacatcctcagtgtgacggca
gcagatgcgggctcgcctcctctcaccaccacgcagaccttcaccgtggacatctccgac
gtcaatgacaatgcccccatcttcaaccagacctcctacaccatgtacgtgcgtgagaac
aacgtccccacggtgtttgttggagccgtgagcgctgcagatgctgacgtggggctgaat
gccaaggtgacctattccctggcagcagagcaagggccagagcggccctggtgctcctgc
atctcggtcaactctgagaatggacacgtgtttgtgctgcggcccctggactacgagcac
ttgaggcagaccgaggtgacggtcagtgcctctgacgcgggctctcctccgctcagagcc
aacgtcaccgtccgccttgtggtgctggacgagaacgacaacgcaccgctcgtgctctac
ccggcccaggagagcagcccggcctccagtgagctggtgcccgtgtcggctgaggcgggc
tacctcatcagcaaagtggtggccgtcgatgccgactcgggacagaactcctggctctcc
taccacctgctcagggccaccgacccaggcctgttttccgtgggcctccagagcggcgag
gtgcgtctcaggaggcccgtgacagagagagacagcgtcaagcagaagctccttgtgctg
gtcagagacaacggcaagcccccgctgtcagccacggcagctctcagcgctctcctgctc
aaggacttcgccgccgtgcgcctcccgcacagcagcccggcctccgaggatcaggccgcc
tccctgaccacctatttaatcattgccttggtctttgtctccctcctcttcctcatctcc
accgcagtgctggtggctcgcaaggtgtgcaggaggaaggagctgaaggctggccatgtg
ctctatgctgccgacaccttgcagagcggcccggccgatgcagccgctgcagggaccctg
ccccgcacctattgctacgagatcagcctcaccacgggctcgggcaacagcgagttcaga
ttcctcaagcccatcctgcccagcctgcccccacagcactgcgccgtgggccagggcctg
gaggaggaacaggatttccccggtgtccctgtcagcaccgaggacatggccccagacaat
gctggcgctctctctgcaggacagttcagtgctctttccttcaactag
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