Geospiza fortis (medium ground-finch): 106632150
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Entry
106632150 CDS
T03755
Name
(RefSeq) protocadherin beta-13-like
KO
K16494
protocadherin beta
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gfr04515
]
106632150
Cell adhesion molecules [BR:
gfr04515
]
Cadherins
Protocadherins
106632150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
106632150
NCBI-ProteinID:
XP_014167090
LinkDB
All DBs
Position
Un
AA seq
763 aa
AA seq
DB search
MFGHADIEYTQLLQPRSVAGPGCLAAFGIAGRAERQELCAQSDTCMLPFELLLSNPLQFF
RVEVTLEDINDHSPIFPDERVTFKIVERSDPGSRFPLEVAQDLDIGRNTVQEYSISPENE
YFSVSYGSRSEDDKYLELILENALDREEQAEMRFSVIAMDGGSPPRRGTIEISIIVLDVN
DNAPIFTEERYIGKVLENTPEGSVVLTVLATDPDAGVNGDISYQLSQAVGRSASAFVVDP
ITGEIKLTKPLDFETAHTHELTVRARDGGGLSAICKVLVEVVDVNDNAPELVVSSFSSPL
PENTVPGTVVALFTVRDRDSGANGKISCALQDQLFFSLRPAYKNYYELVTVSALDREETP
QYILSVTAADAGSPPLTTTQTFTVDISDVNDNAPVFNQTSYTMYVRENNVPTVFVGAVSA
ADADVGLNAKVTYSLAAEQGPERPWCSCISVNSENGHVFVLRPLDYEHLRQTEVTVSASD
AGSPPLRANVTVRLVVLDENDNAPLVLYPAQESSPASSELVPVSAEAGYLISKVVAVDAD
SGQNSWLSYHLLRATDPGLFSVGLQSGEVRLRRPVTERDSVKQKLLVLVRDNGKPPLSAT
AALSALLLKDFAAVRLPHSSPASEDQAASLTTYLIIALVFVSLLFLISTAVLVARKVCRR
KELKAGHVLYAADTLQSGPADAAAAGTLPRAYCYEISLTTGSGNSEFRFLKPILPSLPPQ
HCAVGQGPEEEQDFPGVPVSTEDMAPDNAGALSAGQFNALSFS
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtttggccatgcagacattgaatatacgcagctgcttcagccgcgttccgttgctggc
cccggctgtctcgctgccttcgggatcgcgggccgggccgagcggcaggagctgtgcgcc
cagtccgacacctgcatgctccccttcgagctgctgctctccaaccccctgcagttcttt
cgggtcgaggtcactctggaggatatcaatgaccactcgccaattttccccgatgaacga
gtcacttttaagatcgtagaaaggagcgacccgggctctcgtttcccactggaagtggct
caggacctcgatattggcaggaacacagtccaggagtacagcatctctcccgagaacgag
tatttcagtgtctcctatggaagtcggagtgaggatgacaaatatcttgaacttattctg
gaaaatgcactagaccgagaggagcaggcagagatgagattcagtgttattgctatggac
ggtggctctcctcccagacgtgggaccatcgagatctctattatcgttctagacgtaaat
gacaatgctcccatattcacagaagagcgttatattgggaaagttctggagaacacgcca
gaaggctctgtggttctgactgtgctggcaactgatccggatgcaggagttaatggggac
atctcctatcaactcagccaggcagtgggacggagtgcctcagcatttgtggttgatccc
ataactggtgaaattaaactcacaaaacctctagacttcgagacagcacacactcacgag
ctcactgtaagggccagagatggtgggggcctttcagcaatctgcaaggtgttggtggag
gtggtggatgtgaatgacaatgccccagagctggtggtcagttccttcagcagtcccctc
cctgagaacacagtgcccggcacggtggttgccctgtttacggtcagggaccgggattct
ggtgccaacgggaagatctcgtgtgccctgcaggatcagctcttcttctccctgcggcca
gcctataagaattactatgagctggtgacagtgagcgcgctggaccgcgaggagacgcct
cagtacatcctcagtgtgacggcagcagatgcgggctcgcctcctctcaccaccacgcag
accttcaccgtggacatctccgacgtcaatgacaatgcccccgtcttcaaccagacctcc
tacaccatgtacgtgcgtgagaacaacgtccccacggtgtttgttggagccgtgagcgct
gcagatgctgacgtggggctgaatgccaaggtgacctattccctggcagcagagcaaggg
ccagagcggccctggtgctcctgcatctcggtcaactctgagaatggacacgtgtttgtg
ctgcggcccctggactacgagcacttgaggcagaccgaggtgacggtcagtgcctctgac
gcgggctctcctccgctcagagccaacgtcaccgtccgccttgtggtgctggacgagaac
gacaacgcaccgctcgtgctctacccggcccaggagagcagcccggcctccagtgagctg
gtgcccgtgtcggctgaggcgggctacctcatcagcaaagtggtggccgtcgatgccgac
tcgggacagaactcctggctctcctaccacctgctcagggccaccgacccaggcctgttt
tccgtgggcctccagagcggcgaggtgcgtctcaggaggcccgtgacagagagagacagc
gtcaagcagaagctccttgtgctggtcagagacaacggcaagcccccgctgtcagccacg
gcagctctcagcgctctcctgctcaaggacttcgccgccgtgcgcctcccgcacagcagc
ccggcctccgaggatcaggccgcctccctgaccacctatttaatcattgccttggtcttt
gtctccctcctcttcctcatctccaccgcagtgctggtggctcgcaaggtgtgcaggagg
aaggagctgaaggctggccatgtgctctatgctgccgacaccttgcagagcggcccggcc
gatgcagccgctgcagggaccctgccccgcgcctattgctacgagatcagcctcaccacg
ggctcgggcaacagcgagttcagattcctcaagcccatcctgcccagcctgcccccacag
cactgcgccgtgggccagggccctgaggaggaacaggatttccccggtgtccctgtcagc
accgaggacatggccccagacaatgctggcgctctctctgcaggacagttcaatgctctt
tccttcagctag
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