Glossina fuscipes (tsetse fly): 119633164
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Entry
119633164 CDS
T09630
Name
(RefSeq) putative U5 small nuclear ribonucleoprotein 200 kDa helicase
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
gfs
Glossina fuscipes (tsetse fly)
Pathway
gfs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gfs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119633164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gfs03041
]
119633164
Enzymes [BR:
gfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119633164
Spliceosome [BR:
gfs03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
119633164
Complex C
U5 SnRNP specific factors
119633164
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
SNRNP200_wHTH
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_30
AAA_22
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
119633164
NCBI-ProteinID:
XP_037882438
UniProt:
A0A8U0WB76
LinkDB
All DBs
Position
Unknown
AA seq
2148 aa
AA seq
DB search
MADAAARQLQYEYKANSNLVLQADVRLIERPRRDEATGEVMSLVGKLEGTRMGDRYQRSK
PEKTEERKAKRQKRDEAQYDFERMKGATLLSEGIDEMVGIVYRPKTQETRQTYEVLLSFI
QEALGDQPRDILCGAADEILAVLKNDKLKDRERKKEIDSLLSSVTEERFALLVNLGKKIT
DFGSDAVNALTLNNNEEQIDETYGINVQFEESEEESDNDMYGEIRDEDGQDEGEEARIDH
TLHAENLITEESANVKKERSLHPLDIDAYWLQRCLSKYYKDAIVSQSKAADVLRILKDAA
DERECENQLVLLLSYDCFDFIKQLKLNRQMILYCTMLASAQSESESQHIRKQMRNDSHLA
KILRQLETCKTEDEEGYGNTSRSHKTDKSNNDEGSQTKGGQVKGVRQVLELDELSFSQGS
HFMANKRCQLPDGSFRKQRKGYEEVHVPALKPIPFEDKEELQNIDKLPKYVQPVFEGFKT
LNRIQSRLWHAALESDENVLLCAPTGAGKTNVALLCMMREIGKHINEDGTINVDDFKIIY
VAPMKSLVQEMVGNFGRRLGCYNLTVSELTGDHQLTREQIAATQIIVCTPEKWDIITRKG
GEKTFTSLVRLVIIDEIHLLHDERGPVLEALVARTIRNIEVTQEDVRLVGLSATLPNYQD
VATFLRVKPDKGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNEIVYEKTMEHAGRNQ
VLVFVHSRKETGKTARAVRDMCLEKDTLGSFLREGSASMEVLRTEAEQVKNSELKELLPY
GFAIHHAGMSRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGR
WVELGALDVLQMLGRAGRPQYDTKGEGILITNHSELQFYLSLLNQQLPIESQFVAKLPDM
LNAEIVLGTVQNLKDAVNWLGYTYLYIRMLRNPTLYGISHDAIKDDPLLEQRRADLVHTA
ALHLDRSGLVKYDRKSGQFQITALGRIASHYYCGHETMMTYNQLLKQTLSEIELFRVFSL
SSEFKHIAVREEEKLELQKLMERVPIPIKESMEEHSAKVNVLLQAYISQLKLEGFALMSD
MVFITQSASRLMRAIFEIVLYRGWAQLADKALILCKMIDRRMWQSMTPLRQFKKMPDEIA
KKLEKKNFPWERLYDLEPHEIGELIRVPKLGKTIHKFVHQFPKLELSTHIQPITRSTLRV
ELTITPDFQWDEKVHGLSEGFWILVEDVDSEIILHHEFFLLKEKYSQDEHQLKFFVPVFE
PLPPQYFLRIVSDRWIGSETQLPVSFRHLILPEKNMPPTELLDLQPLPISALRNTKFEKF
YEKFPQFNPIQTQVFNAVYNSDDNVFVGAPTGSGKMTIAEFAIMRLFSQQPEGRCVYLVS
KEDLADLIFADWQTKFGTLINNLGKRSLNVVKLTGETGTDLKLLAKGQLIITTADKWDVL
SRRWKQRKNVQNVQLFIVDELQLVGSEDGPVLEVVCSRMRYISSQIEKQIRIVALSSSLA
DARDVAQWLGCNANATFNFHPSVRPIPLELHIQGFNITHNATRIASMSKPVYNSVLKYSP
HKPVIVFVSSRKQARLTAIDILTYSASDLQPNRFFHAEKEDIKPFLDRMTDKTLKETLSQ
GVAYLHEGLTAADHRLVEHLFDTGAVQVVVVARDLCWGMSISAHLVIIMDTQFYNGKNHS
YEDYPITDVLQMIGRANRPNEDADAKCVLMCQSSKKDFFKKFLNEPLPIESHLDHRLHDH
FNAEVVTKTIENKQDAVDYLTWTFLYRRLTQNPNYYNLQGITHRHLSDHLSEFVENTLSD
LEQSKCISIEDDMDTLPLNLGMIAAYYYINYTTIELFSLSLNSKTKIRGLLEIISSAAEY
EDIVIRHHEENILRNLSQRLPNKLSGPNDAMPKFNDPHIKTNLLLQAHLSRLQLGPELQG
DTEIILGKAVRLIQACVDVLSSNGWLSPAVAAMELAQMVTQAMWSKDSYLKQLPHFNADI
IKRCTEKKIETVFDIMELEDDDRSRLLQLNDDQMADVARFCNRYPNIEINFRVEDKDRIR
PGSTVNVDVQLEREDEVTGPVIAPFFPQKREEGWWVVIGDPKGNSLLSIKRLTLQQKAKV
KLDFVAPSPGRHEYTLYFMSDSYLGCDQEYKFLIEVADFQSDSDSGSD
NT seq
6447 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgccgccgcaagacaattgcagtatgagtacaaggctaattcgaatttggtt
ttgcaagctgatgtgcggcttattgagcggccccgaagagatgaagcgactggtgaagta
atgtctttggtgggcaaactagaaggtacacgcatgggtgatcgttatcaacgctcgaaa
ccagaaaagaccgaagagcgcaaagccaagcgtcaaaaacgagacgaagcacaatacgat
tttgaaagaatgaaaggtgccacgttattatctgaaggaattgacgaaatggttggtatt
gtttaccgtccgaaaactcaagagactcgtcaaacgtacgaagtacttttgagtttcata
caagaggctttaggggatcagccacgcgatatattatgtggtgcagcagatgaaatttta
gcagtattgaaaaatgataagctgaaagacagagaacgaaagaaggaaattgacagttta
ttgagttcggtaacagaggaaagattcgctttgttagtaaatttgggaaagaaaatcact
gattttggttcagatgctgttaacgctttaacgctaaacaacaatgaagaacaaattgac
gaaacatatggcattaacgtgcagtttgaggaatcagaggaggaaagtgataatgacatg
tacggtgaaatacgtgatgaggatggtcaagacgagggtgaagaggcgcgcattgaccat
actttgcatgctgaaaaccttataactgaggaatcggcaaatgttaaaaaggaacgttct
ctacatcctttggatatcgacgcgtattggttgcagcgttgtttaagtaaatactataag
gatgcaatagtttctcaaagcaaagctgccgatgttttacgtattttaaaagatgctgct
gatgaaagggaatgtgaaaaccaattggtcctattgctgagttatgactgctttgatttt
ataaagcagttgaaacttaataggcaaatgatcctttattgtactatgttagcctctgca
cagagcgagagtgagagccagcatatacgtaaacaaatgcgtaacgactctcatttggct
aaaatcttgcgtcaattagaaacttgtaagacggaggatgaagaaggttatggaaatact
tcccgttcacacaaaactgataaatcgaacaatgatgaaggtagtcaaactaagggcggt
caagtcaaaggagtacggcaagttctggaactggatgaattatcattttcacaaggctct
cattttatggcaaacaagagatgccagcttccagatggatcatttcgtaaacagaggaag
ggttatgaagaagtacatgtacccgctttaaaaccgatacccttcgaagacaaggaagaa
ctgcagaatatagacaagctaccaaagtatgtacaaccagtgtttgagggttttaaaact
ttaaatcgcatacagtcacgcctatggcatgccgctttagaatctgatgaaaatgtgctg
ctttgtgctccgactggagcaggtaaaacgaatgtagccttgctttgcatgatgcgtgaa
attggtaaacacatcaacgaagatggtactattaatgtagatgattttaaaatcatttat
gtggctccaatgaaatcattggtccaagaaatggtgggtaattttggacgacgtttgggt
tgctataacttgacagtgtctgagttgactggcgatcatcaactcacacgtgaacaaata
gcagctactcagattattgtttgcactcccgaaaagtgggacatcataactcgtaaaggc
ggagagaagacttttacatctttagtgcgattggtgattatcgacgaaattcatttattg
catgatgagaggggccctgttttagaagctttggtagcgcgtaccatacgcaatattgaa
gttacccaagaagacgttcgtttagtaggtttgtcagcgactctgccaaactaccaggat
gtcgcaacttttctgcgagttaaacctgacaaaggtctattctattttgataacagcttc
cgccctgtagctttggagcagcagtacatcggagttactgaaaaaaaggctttgaagcgt
tttcaggttatgaatgaaattgtttacgaaaaaaccatggagcatgctggacgtaatcaa
gttttagtttttgttcactctcgcaaagaaactggaaaaacagcacgagcggtacgagat
atgtgtttggaaaaagacacacttggcagttttctaagagagggctcagctagtatggaa
gtgttacgtaccgaggccgagcaagtgaaaaattctgaattgaaggaattattaccttat
ggctttgccatacatcatgccggcatgtcaagggtagatcgcactttggtagaggatctg
ttcgccgatcgacacatacaagtgctggtttcaactgctactctagcttggggtgttaat
ttaccagcgcatactgttattattaaaggcacgcaagtttataatcccgaaaaaggtcgc
tgggttgaattaggtgctttggatgtattgcagatgttaggacgcgctggacgaccgcag
tacgacacgaagggtgagggcatactcattactaatcacagtgaattacagttctacttg
tctctcttaaatcaacaacttccgattgaatcacagttcgttgcaaaattgccggatatg
ttaaacgctgaaatcgttttgggtacagttcaaaatctcaaagatgccgtgaactggttg
ggttacacatatctatacattcgcatgttgagaaatcctactctgtacggcataagtcat
gatgcgattaaggacgatccattactcgaacaaagaagagccgatttagtgcacacagca
gctttacatttagatcggagtggtctggttaaatatgatcgtaaaagcgggcaatttcaa
attactgctttgggtcggatagcctcgcattattattgtggtcatgaaaccatgatgaca
tacaaccaacttctgaaacagacactatcagaaattgagttgttccgtgttttctctttg
tcgtcagagtttaaacatattgccgtgcgagaagaagagaaattagagctgcaaaaatta
atggaacgcgtgcccataccaattaaagagtccatggaggagcacagcgcaaaagtaaac
gttttgctccaagcatatatttcacaacttaaattggaagggtttgctctcatgtctgat
atggtttttataactcaatcggcatcacgtttaatgcgcgctatattcgaaatagtgctg
taccgtggatgggcacaattagcggataaagctttgattttatgcaagatgatcgatcgc
cgtatgtggcagtccatgactcctttgaggcaattcaagaaaatgccagatgaaatcgcc
aaaaaactggagaaaaaaaattttccttgggaacgactttatgacctggaacctcatgag
atcggcgaactcatacgcgtgccgaaattgggtaaaaccatacataaatttgttcaccaa
ttccccaaattggaattatccactcacattcaacctattacgcgttctacattgagagtg
gaacttactataacgccagattttcaatgggacgaaaaagttcacggcctatctgaagga
ttttggattcttgtagaggatgtggactctgaaattatactacatcatgaatttttcctt
ctgaaagaaaagtactctcaagatgagcatcagttgaaattctttgtgcccgtcttcgaa
ccacttcctccccaatattttttgcggatagtttcagatcgatggataggttcggaaacc
caattgccagtttcatttcgtcatttgatactgccagaaaagaacatgccgcccactgaa
ttacttgatttacagcccttacccatttcagccttacgaaatacaaagtttgaaaaattt
tatgaaaaatttcctcaattcaatcccattcaaactcaagttttcaacgctgtttataac
agcgacgacaacgtttttgtaggagcgccgactggatcgggaaagatgaccattgcagaa
ttcgccataatgcgcttgttttctcagcaacctgaaggacgctgtgtttatctagtatct
aaggaagatttggctgatttaatttttgctgattggcaaacgaaattcggcacattaatc
aacaatttaggtaaacgcagcttgaacgtggttaaattaactggtgaaaccggcacggat
cttaagttgttggccaaaggacaattgataataacaacagcagataaatgggatgtatta
tcaaggcgatggaaacagcgtaaaaatgtccaaaatgtccaactgtttatagtggatgaa
ctgcaattggttggcagtgaagatggtcccgtgttggaagtggtttgttcacgtatgcgc
tatatatcatctcagatcgaaaaacaaatacgtattgtagctttgtcctcttcccttgcg
gatgctcgtgatgtcgcccaatggctaggttgcaatgccaacgctaccttcaattttcat
cccagcgtaaggccgataccattagagttgcatatacagggcttcaatatcacacataat
gctacacgtattgcctctatgtctaaaccagtatataattccgttctgaaatatagtccc
cataagccggtgatagtgtttgtctcgtcacgaaaacaagcgcgtcttacggctattgat
attttaacttatagtgcttcggatttacagcccaacagattctttcatgccgagaaggaa
gatatcaaacctttcttggatcggatgacggacaaaactcttaaagagaccttgtcacaa
ggtgtagcatatttacatgaaggcctaacggctgctgatcatcgtctagtggaacatttg
tttgatacaggcgcggtgcaggttgttgtcgtagctcgtgacctgtgctggggcatgagt
atttctgcccacttagtcataataatggatacacaattttataacggcaaaaatcattcc
tacgaggattatcctatcactgacgttttacagatgatcggtcgcgctaatcggcctaat
gaagatgcagatgctaaatgtgtgctgatgtgtcaatcatcaaaaaaggatttttttaaa
aaattccttaacgaaccgttacctatcgaaagtcatctggatcatcgtttgcacgatcat
ttcaatgccgaagttgtaactaaaaccattgaaaacaaacaagacgctgtcgattatctt
acttggacttttctttaccgacgccttacgcaaaatccaaattattataacttgcaaggc
attactcatcgccatctctcagatcacttgtctgaatttgtcgaaaacactctttccgac
ttggagcaatcgaaatgcattagcatagaagacgacatggatactttacctttaaatttg
ggaatgatagccgcttattattacatcaattataccacgatcgaattattcagtttatcg
ctgaatagtaaaactaaaattcgaggactgttagaaatcatttcttcggcagctgaatat
gaagacatagtaatacgtcatcacgaagaaaacatattgcgtaatttatcacaacgttta
cccaataaacttagcggtcccaatgacgcgatgccaaaattcaatgatccacacatcaag
acgaatctcttattgcaagcgcatttatctcgcttacaattgggtccggaattgcaaggc
gacactgaaatcatattaggaaaagcggtccgacttatacaagcttgtgtcgatgtttta
agttcaaacggatggctatcgccggctgtggctgccatggaattggcccaaatggttaca
caagctatgtggagcaaagattcgtatctcaaacaattgccacattttaatgcggatata
atcaagagatgtacagaaaagaaaattgaaactgttttcgatattatggaattagaagat
gatgatcgctcacgtcttctacaattgaacgatgatcaaatggctgatgtggccagattt
tgcaatcgataccccaacatagaaataaacttcagggtagaagataaagaccgaatacgt
ccgggttccactgttaacgtggacgtacagttagaacgtgaagatgaagtcacgggccca
gttatagctcccttcttccctcagaaacgagaagaaggctggtgggttgtcattggcgat
ccaaagggtaattccttactttctattaaacgtttaacattacaacaaaaagctaaagtc
aagctggatttcgtcgctccaagtcctggccgtcatgaatacactttatattttatgagt
gattcctatttaggctgtgatcaggaatacaaatttctaattgaggtggctgattttcag
tccgatagtgacagcggttcggattaa
DBGET
integrated database retrieval system
