Glossina fuscipes (tsetse fly): 119633403
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Entry
119633403 CDS
T09630
Name
(RefSeq) RNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
gfs
Glossina fuscipes (tsetse fly)
Brite
KEGG Orthology (KO) [BR:
gfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gfs03016
]
119633403
Enzymes [BR:
gfs01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
119633403
Transfer RNA biogenesis [BR:
gfs03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
119633403
Prokaryotic type
tRNA splicing ligases
119633403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
DUF6471
ACP_syn_III_C
Motif
Other DBs
NCBI-GeneID:
119633403
NCBI-ProteinID:
XP_037882873
UniProt:
A0A8U0WD19
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MVVRPYTEELKYLEKISDCCWRIKKGFQPNMNVEGCFYVNERLERLMLEELKNSCRPGAV
GGFLPGVKQIANVAALPGIVGRSIGLPDIHSGYGFAIGNMAAFDMDDPLSVVSPGGVGFD
INCGVRLLRTNLYEKDVQPVKEQLAQSLFDHIPVGVGSKGIIPMNAHDLEEALEMGMDWS
LREGYVWSEDKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIFD
KWSASKMGIEEKGQVVVMIHSGSRGFGHQVATDALVQMEKAMKRDKIETNDRQLACARIN
SNEGQDYLKAMSAAANFAWVNRSSMTFLTRQAFAKMFRTTPDDLDMHVIYDVSHNIAKIE
NHMVDGKEKKLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLVGGTMGTCSYVLTGTEKGM
QETFGSTCHGAGRALSRAKSRRNLDYKDVLERLEEMGIAIRVASPKLVMEEAPESYKDVT
DVVNTCHAAGISKKCIKLRPIAVIKG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggtggttagaccttataccgaagagttaaaatatttagaaaaaatcagcgactgttgt
tggcgcatcaaaaagggctttcagcccaatatgaatgtggaaggatgcttttacgtgaac
gaacggctggaacgtttgatgctggaggagttaaaaaattcttgccgacccggtgctgta
ggtggcttcttgccaggtgtcaaacagattgcgaacgtggcagcattacctggtattgtg
ggacgatcaatcggtctacctgatatccattccggttacggttttgctattgggaacatg
gctgcctttgacatggatgatccgctctctgtggtaagtcccggcggtgttggttttgat
attaactgtggcgtacgcttgttaagaaccaatctgtatgagaaagatgtacaacctgtc
aaagaacaattagcccagtcattattcgaccatataccagtaggtgtcggttccaaaggc
ataattcccatgaatgctcacgacttggaagaagctctagaaatgggtatggattggtca
ttaagagaaggttatgtttggtcggaggacaaagagcactgcgaagaatatggccgtatg
ctgaatgcagatccatctaaagtaagcttgagagctaaaaagagaggtcttccacagttg
gggactttgggagcaggcaatcattatgccgaaattcaagtagtagatgaaatttttgat
aaatggagcgcttccaaaatgggtattgaagagaaaggccaagttgtggtaatgatacat
tcgggaagtcgaggttttggacatcaggttgcgactgatgcattggtgcaaatggaaaaa
gctatgaaacgggataaaattgaaactaacgaccgacagttggcttgtgcccgcatcaac
tcaaacgagggccaagattatttgaaagcaatgtctgctgccgcaaatttcgcctgggtt
aaccgaagctctatgacctttttaactcggcaagcatttgccaaaatgtttcgaaccaca
cctgacgacctggatatgcatgtcatatacgatgtctcgcataacattgctaaaatagaa
aatcatatggtagatggtaaggaaaagaaattgctggtccatcgcaaaggttccacacga
gcatttcctccacatcatcctttgataccagtagattatcagcttactggacagcctgtt
ttggtagggggcacaatgggaacttgctcctacgttttaactggtacagaaaaaggcatg
caagaaacatttggctctacatgtcacggagcgggtcgtgcgttgtcgcgtgccaaatcg
cgacgaaacctcgattataaagacgttttagaacgattggaagaaatgggaatagcaata
cgtgtcgcttcacctaaactcgttatggaagaggcacccgagtcctataaagatgtaaca
gatgttgtaaatacttgtcatgcggccggtatcagtaaaaaatgcattaaactacgacca
atcgccgtcataaaagggtag
DBGET
integrated database retrieval system
