Glossina fuscipes (tsetse fly): 119633850
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Entry
119633850 CDS
T09630
Name
(RefSeq) 5'-3' exoribonuclease 2 homolog
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
gfs
Glossina fuscipes (tsetse fly)
Pathway
gfs03008
Ribosome biogenesis in eukaryotes
gfs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gfs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119633850
09123 Folding, sorting and degradation
03018 RNA degradation
119633850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gfs03021
]
119633850
03019 Messenger RNA biogenesis [BR:
gfs03019
]
119633850
03009 Ribosome biogenesis [BR:
gfs03009
]
119633850
03016 Transfer RNA biogenesis [BR:
gfs03016
]
119633850
Transcription machinery [BR:
gfs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119633850
Messenger RNA biogenesis [BR:
gfs03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
119633850
Ribosome biogenesis [BR:
gfs03009
]
Eukaryotic type
Pre-60S particles
RNases
119633850
Transfer RNA biogenesis [BR:
gfs03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
119633850
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
119633850
NCBI-ProteinID:
XP_037883561
UniProt:
A0A8U0WE57
LinkDB
All DBs
Position
Unknown
AA seq
954 aa
AA seq
DB search
MGVPAFFRWLSRKYPSVIIECVENKQVDPDTGKNIYDDGNSPNPNGIEFDNLYLDMNGII
HPCTHPEDKPAPKNEDEMMIAIFDCIDRLMNIVRPRKLLYMAIDGVAPRAKMNQQRSRRF
RAAKEAVEKRLEIERIRSELLTKGFVLPPAKEKGEHFDSNCITPGTPFMERLSQCLHYYI
HDRLNNNPAWKDLKVILSDANVPGEGEHKIMDFIRKQRSQPDHDANTQHVLCGADADLIM
LGLATHEPNFTIIREEFLPNKPKPCDICSQFGHEMDKCVGLNAIGVSNADFKPDVPIGAE
VKFIFVRLSVLREYLKKTLDMPNLPFKYEFERVLDDWVFMCFFVGNDFLPHLPSLEIREG
AVDRLVELYKKCVYRTGGYLTDSGEVKLERVQLILSDLGQVEDHIFKERQRREQQFKARE
KSKRLRDDRYNANVMEQSGAFKLTPLGKGNNPLPLIDNYKEQASSLRNSQQTNTPQQEHH
GTKRTASQASFNNDDEEEEEPNDEVRLWEDGFKDRYYESKFDVNKENLDFRYSVALQYVR
GLCWVLKYYYQGCASWNWYFPYHYAPFASDFVNISGLSTQFERGSKPFNPLEQLMGVFPA
ASSSHVPEPWAKLMSDPNSDIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALKP
YYNLLTEAEIKRNKQGDCRLYAARGNSKYKFLSLQYRNKVFDTTPEVLIVVDGMRGNILK
SEENVSQKGTLPSPIINLHDITDNYVVTVCFRDPTYGEDFIFPAIRLPKAIDPPNILAPE
SKDANYRPKIGFNHNLPQAYVSQGGHRLLNNSLGGEYRNEGNEERQNYSNYRQQNYQFQG
QQTSHYQGQQTNQHQGQQTNQFFNKSTGTWRSGNVGNYERPNYGGGHYGHKQQNSYQNNY
NNNNNTGGSATGSRYQPFNRQQQHQQKQQQQSNYFRNNSNNPANNRYNNNYRRY
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgccagcattttttcgttggcttagtcgcaaatatcctagtgtgataattgag
tgtgtggaaaataagcaagtcgatccagatacgggcaaaaatatatatgatgatggaaat
tcacctaatccaaatggtattgaatttgataatttatatctggatatgaatggtattata
cacccatgcacacatccagaagataagcccgctcccaaaaatgaggatgaaatgatgata
gccatttttgattgtattgatcgtcttatgaatattgtgagacctaggaaattattatat
atggcaattgatggtgtggctccgcgagccaaaatgaatcaacaacgctcaagaagattt
agggcagccaaagaagcagtagaaaagcgtttggagatcgagcgaattcgaagcgaacta
ctgactaaaggattcgtattacctcctgcaaaagaaaaaggtgagcatttcgattccaat
tgcattacaccaggtacgccgtttatggaacggttaagtcaatgcttgcattattatatt
cacgatcgtctgaacaataatcccgcctggaaagatcttaaagttattctctctgacgcc
aacgttccaggcgagggtgagcataagataatggattttataaggaaacagcgctctcag
cccgaccatgatgctaacactcaacatgtattatgcggagcggacgctgatttaattatg
ttgggcttagcgacacatgagcctaattttaccataatacgtgaagagtttttgcccaat
aaaccgaaaccttgcgatatttgcagccaattcggtcatgaaatggacaaatgcgttggt
ctgaacgcaatcggtgtatcaaatgcagatttcaaaccggacgtgccaataggagcggaa
gtaaagtttatttttgtacgtttgagtgtattgagggagtacctgaagaagactttggat
atgcccaacttgcccttcaaatatgagtttgaacgtgtcttagacgattgggttttcatg
tgtttttttgtgggtaatgattttttgcctcacttacccagtcttgaaatacgtgaaggt
gcagtggatcgtttagttgaactatataaaaagtgtgtctaccgtactggtggttactta
actgattcaggagaagttaagttggagcgagtgcaattgattctaagcgatttaggtcaa
gtggaagatcatatttttaaagagcgccaacggagggaacagcagttcaaggcacgtgaa
aaatcgaaacgattgcgcgatgaccgttataatgctaacgttatggagcaatctggggcc
tttaagctaactcccttagggaagggcaacaatccattgccactaattgataattataaa
gaacaagcctcaagtttaagaaattcgcaacaaaccaacacgccacagcaagaacaccat
gggacgaaaaggacggcatcgcaagctagttttaataatgatgatgaagaagaagaggaa
cctaatgatgaggtgcgtttgtgggaagatggttttaaagaccgatattatgagtccaaa
tttgatgtaaataaagaaaatttggattttcgctattctgttgccctgcaatatgtgcgc
ggcttgtgttgggttttaaagtactattatcaagggtgcgcttcatggaattggtacttc
ccatatcattacgctccatttgcttcagactttgtaaatatttccggcttatcaacacaa
tttgaaaggggctcgaagccttttaatcctttggagcaattgatgggcgttttcccagcg
gcaagcagttcccatgtacccgaaccctgggccaaactaatgtctgacccgaattcggac
ataatagatttttatccggaagatttcaaaattgacttgaatggtaaaaaatttgcgtgg
caaggcgttgctttactgccgtttgtagacgagaaaagactttttaaagctttgaaaccg
tattacaacctattaacagaagcggaaatcaagcggaacaaacagggcgattgccgtttg
tatgcggcaaggggaaattctaaatataaatttttaagcttgcaatataggaacaaagtg
tttgacacgacgcctgaagtcctcattgtagttgatggaatgcgtggaaatatattgaaa
tcggaagagaatgtgtcacaaaaaggtacattgccgtcgcccatcattaatttgcacgac
ataactgataactatgttgtgacagtgtgttttcgggaccctacttatggtgaagacttt
atattccccgctattagactgccaaaagcaatcgatccgccaaacattttggctccagaa
tcgaaagatgctaattatcgccctaagattggctttaatcacaatttaccacaggcctac
gtaagtcaaggtgggcacagactgcttaacaacagtctaggcggcgaatacagaaatgag
gggaacgaagaacgccaaaattacagcaattatcgacaacaaaactaccaatttcaagga
caacaaacaagtcattatcaaggacaacaaacaaatcaacatcaaggacagcaaacaaat
caattttttaataagagcactggaacgtggcgcagcggtaatgttggaaattacgaacgc
cctaattatggaggtggtcattacggtcataaacagcaaaattcatatcaaaataattac
aacaataacaacaacaccggtggcagcgctactggtagcagatatcaaccttttaatcga
cagcaacagcaccagcagaagcaacaacaacaatcaaattattttcgcaataattcgaac
aatccagcaaataaccgttataataacaactacagaagatattga
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