Glossina fuscipes (tsetse fly): 119636646
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Entry
119636646 CDS
T09630
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog isoform X1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
gfs
Glossina fuscipes (tsetse fly)
Pathway
gfs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gfs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119636646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfs03019
]
119636646
03041 Spliceosome [BR:
gfs03041
]
119636646
Messenger RNA biogenesis [BR:
gfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
119636646
Spliceosome [BR:
gfs03041
]
Complex B
Other components
Prp19-related factors
119636646
Complex C
119636646
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_2
TPR_12
Suf
Mad3_BUB1_I
RPN7
TPR_15
ARM_TT21
ARM_TT21_C
PPR
TPR_10
Motif
Other DBs
NCBI-GeneID:
119636646
NCBI-ProteinID:
XP_037888065
UniProt:
A0A9C6DQU7
LinkDB
All DBs
Position
Unknown
AA seq
896 aa
AA seq
DB search
MKMGINTQLLRQQNGFSRHFLCMDIDFPEEDVPYEEEILRNAYSVKHWLRYIDHKAKAPN
NGVNIVYERALKELPGSYKIWYNYLRTRRRQVRGRCLTDPMFDEVNNTFERALVFMHKMP
RIWMDYGAFMTVQCKITRTRHVFDRALRALPITQHYRIWPLYLKFARKYDIPETAVRIYR
RYLKLAPDDAEEYIEYLTSVNRLDEAAQQLASIVDNENFVSKYGKSNHQLWNELCDLISK
NPDKVRSLNVDAIIRGGLRRYTDQLGHLWNCLADYYVRSGLFDRARDIYEEAIQTVRTVR
DFTQVFDEYAQFEEVSLNKRMEMVAKDPNATSEDDIDVELRLARFEHLMERRLLLLNSVL
LRQNPHNVHEWHKRVKLYEDKPHEIINTYTEAVQTVQPKLSVGKLHTLWVEFAKFYEANG
QVEDARIVFERATEVEFVKVEDLASIWCEWAEMEIRQENYDQALKLMQKATAMPKRKVDY
HDDTETVQMRLYKSLKLWSMYADLEESFGTFKTCKAVYDRIMDLKICTPQIIINYGLFLE
EHNYFEEAFRAYEKGIALFKWPNVYDIWNSYLTKFLKRYGGTKLERARDLFEQCLENCPP
EYAKYFYLLYAKLEEDHGLARHAMAVYDRATSAVKPEEMYDMYNIFVKKAAEIYGLPRTR
EIYEKAIECLPEEHMRQMCVRFAEMETKLGEVDRARAIYAHCSQVCDPRITADFWQTWKD
FEIRHGNEDTMREMLRIKRSVQATYNTQVNMMAAQFINSANAAVDSSNSDAMRLLDAKAT
AVNEQKERQALKNQTSSNIMFVRGETQGAGSNGKVVNPDEIDIGDSDDDAEDEDDDDDGD
QSNAENIKTSEKSVTTCKDINDLVLKKLRIEQQEIPAKVFGGLKVKNQSDDEDMLE
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgggaataaatacacaattgttacgtcagcagaatggctttagcagacacttc
ttatgtatggatatagattttcctgaggaagatgtgccttacgaagaggaaattctccgc
aatgcctattccgtgaaacattggctgcgctatatcgatcataaagccaaagcacctaat
aatggggttaacattgtgtatgaacgtgcccttaaagaattgcctggtagttataaaata
tggtataattacttacgcacccgtcgacgtcaagtgcgcggtcgttgtctcacggatccc
atgttcgatgaggtgaataacacatttgagcgcgctttagtatttatgcacaaaatgccg
cgcatttggatggattatggagcctttatgacagttcagtgcaaaattacccgcactcgc
cacgtgtttgatcgggctttacgtgctttacccattactcagcattaccgcatatggccg
ttgtatttgaaatttgcgcgtaaatatgatattccggaaacggcagttagaatttataga
cgttatttgaaattggctccggatgatgcggaagagtatatagaatatctgacaagtgtt
aatagattagatgaggctgctcagcagttggctagcatagtggataatgaaaattttgtt
tccaagtacggtaaatcaaaccatcagttgtggaatgagttgtgtgatttaatatcaaag
aatccggataaagtgcgatcgttgaacgtagacgccattattaggggtggcttgaggagg
tacaccgatcaactgggtcatttatggaattgtttagctgattattacgtacgttctggc
ctattcgatcgtgcacgagatatctatgaagaagccattcagactgtacgcactgttcga
gattttactcaagttttcgatgaatacgctcagtttgaggaagtctccttaaataagcgt
atggaaatggtggccaaagatcctaatgccacgtccgaggacgatattgacgttgagttg
cgtttggctcgttttgaacatcttatggagcgacgtctattacttttaaacagcgtcctg
ctacgccagaatcctcataatgttcacgaatggcataaacgtgttaaattgtatgaagat
aaaccgcatgagataatcaatacatatacagaagctgttcagacagtgcaaccgaagcta
agtgtgggtaaattgcatacactttgggtagaatttgcaaaattctatgaagccaatggt
caggttgaagatgctcgtattgtctttgaacgcgctacggaggtagaatttgtaaaggtt
gaggatttggcctctatttggtgcgaatgggcagaaatggaaatacgtcaggaaaactat
gatcaagcgcttaaattgatgcaaaaagctaccgccatgccgaaacgtaaagttgattat
cacgacgatacagaaactgtgcaaatgcgtttgtataagtcgttaaaattgtggtccatg
tacgccgatttggaggagtcgtttggcacttttaaaacctgtaaagcagtgtatgatcgt
ataatggacttaaagatttgtactccacaaattattattaattacgggttgtttctggaa
gaacataattactttgaagaggcattccgagcctatgaaaaaggcatcgctttgttcaaa
tggcccaatgtttacgacatttggaattcgtatttaacaaaatttcttaaaagatatggt
gggacgaagttagaaagagcacgagatcttttcgaacaatgtttggaaaattgccctccc
gaatatgccaaatatttctatttgctatacgctaaattggaagaggatcacggtctagct
agacatgctatggccgtttatgatcgagctaccagcgccgttaagccggaggaaatgtat
gacatgtataatatattcgttaaaaaagcagcagagatctatggattacctcgtacgcga
gaaatttatgaaaaagctattgaatgcttgcctgaggaacatatgcgccagatgtgcgtg
cgttttgctgaaatggaaacgaaattgggagaagttgatcgtgctcgggctatttatgct
cattgctcgcaggtatgtgatccccgtattactgctgatttctggcagacttggaaagat
tttgaaatacgtcatggcaatgaggatactatgcgtgaaatgttacgcattaaacgttcg
gtacaggctacctataacactcaagtgaatatgatggcagctcagttcattaattccgcc
aacgctgccgttgactcaagtaattcggatgctatgcgtttactggatgctaaagccacc
gctgtaaacgaacagaaggaaagacaagcgttgaaaaatcaaacctcttccaatataatg
ttcgtgcgtggtgagacccagggcgccggaagtaatggcaaagtggttaatcccgatgaa
attgatatcggggatagcgatgatgatgccgaggatgaagacgacgacgacgacggggat
caaagtaacgcggaaaatattaagacctcagaaaaatcagtaacaacgtgtaaagatatc
aatgatttagttttaaaaaaattacgaatcgagcagcaggaaataccagctaaagttttt
ggcggtttaaaggttaaaaatcaatcggatgatgaagacatgttagagtaa
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