Glossina fuscipes (tsetse fly): 119637131
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Entry
119637131 CDS
T09630
Name
(RefSeq) regulator of nonsense transcripts 1 homolog
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
gfs
Glossina fuscipes (tsetse fly)
Pathway
gfs03013
Nucleocytoplasmic transport
gfs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gfs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119637131
03015 mRNA surveillance pathway
119637131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfs03019
]
119637131
Enzymes [BR:
gfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
119637131
5.6.2.5 RNA 5'-3' helicase
119637131
Messenger RNA biogenesis [BR:
gfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
119637131
mRNA cycle factors
Common to processing body (P body) and stress granule
119637131
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_19
AAA_30
ResIII
SLFN-g3_helicase
DEAD
Helicase_RecD
AAA_22
AAA_16
UvrD-helicase
NPHP3_N
ATPase
SRP54
nSTAND3
AAA_5
Motif
Other DBs
NCBI-GeneID:
119637131
NCBI-ProteinID:
XP_037888903
UniProt:
A0A9C6DS06
LinkDB
All DBs
Position
Unknown
AA seq
1203 aa
AA seq
DB search
MSVDAYGPSSQTLTFLDTEENDLIGGADTQASDFDYRDLTLASQTQTQASQLDGGFSSAT
AASIAGQTFGRKLDLHSKLNGSTDLQFEEEDDEENTLLTVNELPSHACKYCGIHDPSTVV
MCNNCKKWFCNGRGSTSGSHIVNHLVRAKHREVTLHSEGPLGETVLECYSCGVKNVFVLG
FIPAKADSVVVLLCRQPCAAQNSLKDMNWDQDQWKPLISDRSFLPWLVKIPTEQEQLRAR
QITAAQINKLEELWKENIEATFQDLEKPGIDTEPAQVLLRYEDGYQYEKIFAPLVMLEAE
YDKKLKESQTQEGIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLRYVGDLHKKWK
AIGHVIKVPDNYGEDVGLELKSSAGAPIQCTSNFAVDFIWKCTSFDRMLRALKVFAMDRK
SVSNYIYARLLGHGRNDGTDDVVFRGPAPKQYSAPNLPDLNRSQVYAVKHALQRPLSLIQ
GPPGTGKTVTSATIVYQLVKQHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREA
IDSPVSFLALHNQIRNMDTNIELKKLQQLKDETGELSSADEKRYRALKRNAENQLLEAAD
VICCTCVGAGDARLTRIPFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVM
CKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSMFPSNFFYEGSLQNGVCAEDRK
LKIDFPWPQPDRPMFFLVTQGQEEIAGSGTSYLNRTEAANVEKITTRFLKAGVKPEQIGI
ITPYEGQRAYLVQYMQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGF
LNDPRRLNVALTRSKYGTIIVGNPKVLSKQPLWNHLLNFYKDRKVLVEGSLNNLRESLIQ
FQKPKKLVNTLNMGAHFMSTMMADAREVMIPGSIYDRSGQFGYTGSTSSNNYGGLGFGSN
LIGGNNSAFGFTNQTSMHSLATSHTAGINNFLHQSNNMYGGNAASSTNNQQGNHMQHRHD
AISYISTERVQAAMNNMPVPVGMFMNMSNIPPRFYNQHQQAIQAAAKQGRRTGGFTGNSG
GGRGMNSNNNGSIGNDAAMIRAPGKGRSSANNLINVNEVGVSGIGTDSQSASQSAPIFTQ
KNMSQQMSQTAFPGLSQQPELSQDFGQISQMDGILSQDFGTDALNSDRLNLGLNTQSQFS
QPY
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtagatgcctacggcccaagttctcagactttaacatttttggatacggaagag
aatgatttgatcggcggcgcggacacgcaagcatcggattttgattaccgcgatttaacc
ttggcctctcaaacacaaacgcaggcatcacaattggatggtggattttcaagcgctacg
gctgctagtattgctggccagacgtttggccgcaaattggacttgcattcaaaactaaat
ggctcaacagatctgcagtttgaagaggaggacgatgaggaaaatactttgctaacggtt
aatgaattaccatctcatgcctgcaaatactgtggcatacatgatccgagcactgtggtt
atgtgcaataattgcaagaaatggttttgtaatggtcgcggtagcacttctggctctcat
attgtcaatcatttggtaagagctaagcatcgtgaagtcaccctacattcggagggaccc
ttaggagagacggttctggaatgttattcttgtggcgtaaaaaacgtatttgtgttgggc
tttatacctgctaaggcggactcggttgttgtgttgctttgccgtcagccttgtgctgcc
caaaattccttaaaggacatgaactgggatcaagatcaatggaagccgttaatatcagat
cgctcttttttaccatggctagtaaaaatacccactgaacaagagcagcttagggctcgc
caaataacagctgctcaaattaataaattggaagaattatggaaagaaaatattgaagca
acgtttcaagatctagaaaaacctggaattgacaccgaaccagcgcaagtgttgttacgt
tatgaagatggatatcaatatgaaaaaatttttgccccattggttatgctagaagcggaa
tatgataaaaaattaaaagaatctcagactcaggaaggtattgaggtgcgctgggatgtc
ggacttaacaagaaaactatcgcttattttacattagctaaaactgattctgatatgaaa
cttatgcatggagatgagttacgcttgcgttatgttggggatttacacaaaaagtggaaa
gccattggtcacgtaatcaaagttccagataattatggcgaagatgttggactcgaatta
aaatcatcggctggtgcccctattcaatgcacttcaaattttgctgtcgattttatttgg
aaatgtacctcattcgaccgtatgttacgtgcccttaaggtatttgcaatggatcgcaaa
tccgtatcgaactatatttatgcccgccttttgggccatggacgcaatgatggcactgat
gatgtagtatttcgaggtcctgcccccaaacaatatagtgctccgaatttgccagatttg
aatcgctcacaggtgtacgccgttaagcatgcattacaacgccctcttagtcttatccag
ggtccccctggaactggcaaaacagttacttctgctacaattgtttaccagctggttaaa
cagcatggcggcaccgttttagtttgcgctccgagtaacacggctgtcgatcaattgacc
gaaaaaatacatcgcactaatctgaaagttgtgcgcgtttgcgccaaatctcgtgaagca
attgatagccctgttagctttctcgcgttacacaatcaaatacgcaacatggacacaaat
attgaattgaaaaaattgcaacaactgaaagatgaaactggtgaactgagctcagctgat
gagaagcgttaccgtgctctaaaacgcaatgccgaaaatcaattgctggaagctgccgat
gttatctgctgcacttgcgttggagctggtgacgcgcggttgacacgtatcccatttact
tctatactaattgatgaatccatgcagtctacggagcctgaatgtatggttccggtagtt
ttgggagccaaacaattgattttagtaggcgatcattgccaattaggcccagtagttatg
tgcaaaaaagcggcacgcgctggactctcgcagagtttgtttgaacgtttagtagttttg
ggaataagaccttttcggttggaagtacaataccgtatgcatccggaactctcaatgttc
ccctccaactttttctatgagggctctttgcagaacggggtatgcgctgaggatcgaaaa
ttaaaaattgactttccctggcctcagccagatcgtcccatgtttttcttggtcactcaa
ggtcaggaagaaatagccggctccggtacttcctacttaaatcgtacagaagctgccaat
gttgaaaaaattacaacacgttttcttaaggctggcgtcaagcctgaacaaattggcatc
attacaccctacgaaggacaaagagcctacctggttcaatacatgcaatatcaaggtagt
ttacattcaaaactctatcaggaaattgagattgcaagtgtagacgcttttcagggccgt
gaaaaagacatcattattatgtcatgtgtccgctccaatgaaagacaaggaattggcttc
ctaaacgatcctcgccgcttaaatgtcgctttgacgcgttcaaagtatggcactattatt
gttggaaatccaaaagttttatctaagcaaccactgtggaatcatttgttaaatttttac
aaggatcggaaggttttggttgagggttccttaaacaatcttcgagaatcactaatacaa
tttcaaaaacctaaaaaactcgtcaatacactcaatatgggagctcatttcatgagcact
atgatggctgatgcccgagaagttatgatacctggttccatatacgatcgttcgggacaa
tttggttatactggttccaccagctcaaacaattatggcggtcttggcttcggcagtaat
ctaattggcggaaacaactctgctttcggctttaccaaccaaacatccatgcactcgctg
gctacaagccacacggctggtataaataattttttgcaccaatcgaacaatatgtatgga
ggaaatgcggcatcttctacgaataatcaacaagggaatcatatgcaacatcgtcatgat
gccataagctacatatcgactgaaagagtacaggcagctatgaataacatgccggttcct
gtcggcatgtttatgaatatgagcaacataccacctcgtttttacaatcaacatcagcag
gctatacaagcagctgctaaacaggggcgtcgaactggaggtttcactggcaattcaggc
ggcggtagaggtatgaattcaaataataacggatcaattggcaatgatgctgctatgatt
agagctcccggaaaaggtcgcagttctgctaataatctgattaacgtcaacgaggttgga
gtaagcggtatcggcaccgattcacaatcagcttcccaatcggcgccaatcttcacacag
aaaaatatgtctcaacaaatgagccaaactgcttttccaggcttatcgcaacaacccgaa
ttgtcacaagattttggccaaatatctcaaatggacggcatattgtcgcaagatttcggg
acggatgcacttaacagtgatcgcctcaatttgggtcttaacacccagagtcaattctcg
caaccctattga
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integrated database retrieval system
