Gemmobacter fulvus: KM031_11265
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Entry
KM031_11265 CDS
T07830
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
gfu
Gemmobacter fulvus
Pathway
gfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KM031_11265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfu03019
]
KM031_11265
03009 Ribosome biogenesis [BR:
gfu03009
]
KM031_11265
Enzymes [BR:
gfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KM031_11265
Messenger RNA biogenesis [BR:
gfu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KM031_11265
Ribosome biogenesis [BR:
gfu03009
]
Prokaryotic type
rRNA helicases
KM031_11265
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
QWK89429
UniProt:
A0A975P4C5
LinkDB
All DBs
Position
2346235..2348568
Genome browser
AA seq
777 aa
AA seq
DB search
MTDLDIAAPLAAALAAKGYESLTPVQTAVLAPEVAGRDVLVSAQTGSGKTVAFGIAMAPE
VLAGADRLLFADVPLALIIAPTRELAQQVARELTWLYAETGAQIATCVGGMDYRTEKRTL
DRGAHIVVGTPGRLRDHIERGSLDLSNLKAAVLDEADEMLDLGFREDLEFILQSAPDTRR
TMMFSATVPKAIAELAKDFQRDALRLQTAGEAKQHVDIEYRALNVSARDKEHAIFNMLRY
YEARTAIVFCKTRMAVNHLLARMGNRGFQVVALSGELSQTERMHALQALRDGRARVCIAT
DVAARGIDLPGLELVIHADLPTNSETLLHRSGRTGRAGQKGVSALIVAPAEFRKAQRLLQ
GAKVVAEWAKAPSADEVQERDDARLLEHPSLLEAPGDEMTLAQTLIERFSPEHIAAAFVR
LWREGRSAPEVLQDMATPGQPAAPRERGEFGESVWFTLSVGHSGRAEARWLLPKLCDAVG
ITKTEIGAIRVQTDETFVQIAKSVAGKFGAAMEIEEGVSMRRLDGEPTLERPERAPARKP
AARDRSDRPAYAPKPSRFVEDGEEAAPRKPYAKREDSAPRPYVKREEGDRKPYTPREDGE
RKPYAKREDSERKPFVKREDGDRKPWAPRNDGPKPAYAPRDDAAPRKPYAKREDGDRKPY
AKRDDADRKPYAPREEGAKRPYAPRAAADGAASADRKPRWKEGDKPAGDKPFGAKAPRSA
GFKTHGGAEGKPARAAGFKSHSSEGKSFGKPGAKAKPAPAPRDAKDTSKRFVPPKKK
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatctcgatattgcggcgccgcttgcagcggccctcgccgccaagggctatgaa
tcccttacccccgtgcaaaccgccgttctggcccccgaagttgccgggcgcgatgtgctg
gtttcggcgcagaccggctcgggcaagacggtggcctttggcatcgccatggcccccgaa
gtgctggccggtgccgaccgtctgctgttcgccgatgtgccgctggcgctgatcatcgcg
ccgacgcgcgaactggcgcagcaggttgcgcgcgagctgacctggctttacgccgaaacc
ggggcgcagattgcgacctgtgtgggcggcatggattaccgcaccgaaaagcgcacgctg
gatcggggcgcgcatatcgttgtcggcacgcccggccgtctgcgcgaccatatcgaacgc
ggcagcctcgatctgtccaacctcaaggccgccgtgctggacgaggcggatgagatgctt
gaccttgggttccgtgaggatctggaattcatcctgcaatccgcgccggacacccgccgc
actatgatgttttcggccaccgtgccgaaggcgattgccgaactcgccaaggatttccag
cgcgatgcgctgcgtctgcaaacggcgggcgaggccaagcagcatgtcgatatcgaatac
cgcgcactgaacgtctcggcgcgcgacaaggaacacgcgatcttcaacatgctgcgctat
tacgaagcgcgcacggcgatcgtgttctgcaagacccgcatggcggtgaatcacctgctg
gcccgcatgggcaaccgcgggtttcaggttgtcgccctgtcgggggaactgagccagacc
gagcggatgcacgcgctgcaagcgctgcgtgatggccgggcgcgcgtgtgtatcgccacc
gacgtggcggcacgtggcatcgaccttccggggttggaactggtgatccatgccgacctg
ccgaccaacagcgaaaccctgctgcaccgttcgggccgcaccgggcgcgcgggtcagaaa
ggcgtctcggcgctgatcgtggccccggcggagttccgcaaggcgcagcgcctgctgcaa
ggtgccaaggtcgttgccgaatgggccaaggctccctcggcggatgaggttcaggaacgc
gatgacgcgcgcctgctggaacatccgtcgctgctggaagcaccgggcgacgagatgacg
ctggcgcagacgctgatcgagcggttcagcccggaacatatcgccgccgcctttgtgcgc
ctgtggcgcgaaggccgctcggcgccggaagtgctgcaagacatggcgacgccgggccag
cccgctgcgccgcgcgaacgtggcgagtttggcgaaagcgtgtggttcaccttgtcggtc
ggccattcgggccgcgccgaagcgcgctggctgctgccgaagctctgcgatgcagtgggg
atcaccaagaccgaaatcggtgccatccgcgtgcagaccgatgaaaccttcgtgcagatc
gccaaatcggtggccggcaagttcggtgccgcgatggagatcgaagagggcgtttcgatg
cgccgccttgacggcgagccgacgttggagcgccccgagcgcgcacctgcccgcaagccc
gccgcgcgcgaccgctctgaccggcccgcctatgcgccgaagccctcgcgctttgtcgag
gatggcgaagaggccgcgccgcgcaagccctatgccaagcgcgaagacagcgccccgcgc
ccctatgtcaagcgcgaggaaggcgaccgcaaaccttataccccgcgtgaggatggcgag
cgcaagccctatgccaaacgcgaggacagcgagcgcaagccgttcgtgaaacgcgaggac
ggcgaccgcaaaccctgggccccgcgcaacgacggcccgaaaccggcctatgcaccgcgc
gatgatgcggccccgcgcaaaccctatgccaagcgtgaagacggcgaccgcaagccctat
gccaagcgggacgatgccgaccgcaaaccctatgccccgcgcgaagagggggcaaagcgc
ccctatgcgccgcgtgcggcggctgacggtgccgcctcggcagaccgcaaaccgcgctgg
aaagagggcgacaaaccggctggcgacaagccgttcggtgccaaggctccgcgctcggca
gggttcaagacgcatggcggtgccgagggcaaaccggcacgcgccgcagggttcaaatcg
cattccagcgagggcaagagctttggcaaacccggtgccaaggcaaaacccgccccggcc
ccgcgcgacgccaaggatacgtcgaagcgctttgtgccgccgaaaaagaaatga
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