Gemmobacter fulvus: KM031_12025
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Entry
KM031_12025 CDS
T07830
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
gfu
Gemmobacter fulvus
Pathway
gfu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gfu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KM031_12025 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gfu03021
]
KM031_12025 (rpoC)
03400 DNA repair and recombination proteins [BR:
gfu03400
]
KM031_12025 (rpoC)
Enzymes [BR:
gfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KM031_12025 (rpoC)
Transcription machinery [BR:
gfu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KM031_12025 (rpoC)
DNA repair and recombination proteins [BR:
gfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KM031_12025 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
DUF7567
Motif
Other DBs
NCBI-ProteinID:
QWK89566
UniProt:
A0A975P677
LinkDB
All DBs
Position
2490639..2494880
Genome browser
AA seq
1413 aa
AA seq
DB search
MNQELSTNPFNPVAPVKTFDEIKISLASPERILSWSFGEIKKPETINYRTFKPERDGLFC
ARIFGPIKDYECLCGKYKRMKYRGVVCEKCGVEVTLQKVRRERMGHIELAAPVAHIWFLK
SLPSRIGLMLDMTLRDLERILYFENYVVIEPGLTDLTYGQLMTEEEFLDAQDQFGADAFT
ANIGAEAIREMLAAIDLDSTAVQLREDLKEATGELKPKKIIKRLKIVESFLESGNRPEWM
ILTVLPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKR
MLQEAVDALFDNGRRGRVITGTNKRPLKSLSDMLKGKQGRFRQNLLGKRVDFSGRSVIVT
GPELKLHQCGLPKKMALELFKPFIYSRLEAKGLSSTVKQAKKLVEKERPEVWDILDEVIR
EHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSQEAQ
LEARVLMMSTNNVLSPANGAPIIVPSQDMVLGLYYTTMERKGMVGEGMIFTDVDEVEHAL
AAGSVHLHAKIQARLRQVDGEGNIIWKRYETTPGRLRLGNLLPLNAKAPFELVNRLLRKK
DVQTVIDTVYRYCGQKESVIFCDQIMGLGFREAFKAGISFGKDDMLIPDTKWDIVNEVRD
QVKEFEQQYMDGLITQGEKYNKVVDAWSKCSDKVAGEMMAEISAVRYDDAGAEKEPNSVY
MMSHSGARGSPAQMKQLGGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDCIVRSHDCGTENAITAEAAVNDGEVVASLAERVLGRV
AADDIFVPGTEEVVVKRGELIDERKADAILQAGVATARIRSPLTCEAEEGVCAMCYGRDL
ARGTLVNQGEAVGIIAAQSIGEPGTQLTMRTFHIGGIAQGGQQSFLEASQEGKIEFRNAN
LLANANGEQIVMGRNMQIAIIDEAGQERAAHKVTYGAKVHVKEGAAVKRGAKLFEWDPYT
LPIIAEKAGIARFVDLISGISVRDDTDEATGMTQKIVTDWRSAPKGGDLKPEVIVMNPET
GEPMRNEQGNPISYPMSVDAILSVEDGQEMKAGDVVARIPREGAKTKDITGGLPRVAELF
EARRPKDHAIIAETDGYVRFGKDYKNKRRITIEPVDETLQTQEYMIPKGKHIPVQEGDFV
QKGDYIMDGNPAPHDILRIMGVEALANYMIDEVQDVYRLQGVKINDKHIEVIVRQMLQKF
EVLDSGETTLLKGEHVDKAELDEMNDKALSHGMRPAQAEPILLGITKASLQTRSFISAAS
FQETTRVLTEASVQGKRDKLVGLKENVIVGRLIPAGTGGATSRVKKIAADRDGKVIDARR
NEAEAAAALAAPTAASVVPDVDSSLADTIESRE
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaactcagcaccaacccgttcaacccggtggcgcccgtcaagactttcgac
gagatcaagatctcgctggcttcgcccgagcggatcctgtcgtggtcgttcggtgaaatc
aagaagccggaaaccatcaactaccgcacgttcaagcccgagcgtgacggtctgttctgc
gcgcggatctttggcccgatcaaggattacgaatgcctctgcggcaaatacaagcgcatg
aaatatcgcggcgttgtctgcgagaaatgcggtgtggaagtcacgctgcaaaaggtgcgc
cgcgagcgcatgggccatatcgaactggcggcgcccgtcgcccatatctggttcctgaaa
tcgctgccgtcccgcatcggtctgatgctggacatgacgctgcgcgatctggaacgcatc
ctctatttcgaaaactatgtggtgatcgagccgggtctgaccgacctgacctatggtcag
ctgatgaccgaggaagaattcctcgacgcgcaggaccagttcggcgctgatgctttcacc
gcgaatatcggtgccgaggcaatccgcgagatgctggccgcgattgatctggacagcacc
gccgtgcagcttcgggaagacctgaaggaagccaccggcgagctgaagccgaagaagatc
atcaagcgcttgaagatcgtggaaagcttcctcgaatccggcaaccgcccggaatggatg
atcctgaccgtgctgccggtgatcccgccagaactgcgccctctggtgccgctggatggg
ggacgttttgcgacctctgacctgaacgacctgtatcgtcgcgtcatcaaccgcaacaac
cgtctgaaacggctgatcgagctgcgtgcgcccgatatcatcgtgcgcaacgaaaagcgc
atgctgcaagaagccgtggacgcgctgttcgacaatggccgtcgcggccgcgtgatcacg
ggcaccaacaagcgcccgctgaaatcgctgtccgacatgctgaaaggcaaacagggccgc
ttccgtcagaaccttctggggaaacgggtcgacttctcgggccgttcggtgatcgtgacc
gggccggagctgaaactgcatcagtgcggcctgccgaagaagatggcgttggagctgttc
aagcccttcatctattcgcgtctggaggccaagggcctgtccagcaccgtgaagcaggcg
aagaagctggtcgagaaagagcgcccggaggtctgggacatccttgatgaggtgatccgc
gaacacccggtgctgctgaaccgcgcaccgacgctgcaccgtctgggcatccaggcgttc
gagccgatcctaatcgaaggcaaggcaatccagctgcacccgctggtctgctcggccttc
aacgccgacttcgacggcgaccagatggctgttcacgttccgctctcgcaggaagcccag
ctggaagcgcgcgtgctgatgatgtcgacgaacaacgttctgtcgcccgccaacggcgcg
ccgatcattgttccgtcgcaggacatggtgttgggcctgtattacaccaccatggaacgc
aagggcatggtcggtgaaggcatgatcttcaccgatgtggacgaagtggaacatgcgctg
gccgcaggctccgtgcatctgcacgccaagatccaggcgcgtctgcgtcaggtcgatggc
gaaggcaacatcatctggaagcgttacgagacgacccccgggcgtctgcgtctgggcaac
ctgctgccgctgaacgcgaaagccccgttcgagctggtgaaccgcctgctgcgcaagaaa
gacgtgcagaccgtcatcgacaccgtctaccgctactgcggtcagaaagagtcggtgatc
ttctgtgaccagatcatgggtctgggcttccgcgaggcgttcaaggccgggatttcgttc
ggcaaggacgacatgctgatccccgacaccaaatgggacatcgtgaacgaagtccgcgat
caggtgaaggaattcgaacagcagtacatggacggcctgatcactcagggcgaaaagtac
aacaaggttgtcgatgcctggtcgaaatgctccgacaaggtcgcaggcgagatgatggcc
gagatttcggctgtgcgctatgacgatgccggtgctgaaaaagagccgaactcggtctac
atgatgtcccactccggggcacggggttcgcctgcacagatgaagcagctgggcgggatg
cgcggtctgatggccaagccttcgggcgagatcatcgaaacgccgatcatctcgaacttc
aaggaaggtctgaccgttcttgaatacttcaactcgacccacggcgcccggaagggcctt
gcggatacggcactgaaaacggcgaactcggggtatctgacccgccgcctggtggacgtg
gcgcaggattgcatcgtgcggtcgcatgattgcggcaccgaaaacgccattaccgccgaa
gcggcagtgaatgacggtgaagtggtcgcgtcgctggccgagcgtgtgctgggccgtgtg
gcggcggatgacatctttgtgccgggtaccgaagaagtggtggtgaaacggggcgagctg
atcgacgaacgcaaggcagatgcgatcctgcaagcgggcgttgcaacggcgcgcatccgc
tcgccgctgacctgcgaagccgaagagggcgtctgcgccatgtgctatggccgtgacctt
gcacgcggcacgctggtgaaccagggcgaagctgtcggcatcatcgccgcacagtcgatc
ggcgagccgggcacccagctgacgatgcggaccttccacatcggcggtattgctcagggt
ggtcagcagtccttcctcgaagccagccaagagggcaagatcgagttccgcaatgccaac
cttctggcaaatgccaatggcgaacagatcgtcatgggccggaacatgcagattgccatc
atcgacgaggccggtcaggaacgcgcagcccataaggtgacttatggtgccaaggttcac
gtcaaggaaggggccgcggtcaaacgtggtgccaagctgttcgaatgggatccctatacc
ctgccgatcatcgccgaaaaggccggtatcgcgcgctttgtcgacctgatctcgggcatc
tcggtgcgcgacgatactgacgaagccaccggcatgacgcagaagatcgtcaccgactgg
cgttcggcaccgaaaggtggcgacctgaagccggaagtgatcgtgatgaacccggaaacc
ggcgagccgatgcgcaacgagcaaggcaacccgatctcttacccgatgtcggtcgacgcg
attctgtcggttgaagacgggcaagagatgaaggccggtgacgtcgtggcgcgtatcccg
cgcgaaggtgccaagaccaaggacatcaccgggggtctgccccgcgtggccgaactgttc
gaagcccgtcgcccgaaagatcacgccatcatcgcggaaaccgatggttatgtgcgcttc
ggcaaggactacaagaacaagcgccgcatcaccatcgagccggtggacgagacgctccag
acgcaggaatacatgatcccgaaagggaaacatattccggttcaggaaggcgatttcgtc
cagaagggcgattacatcatggacggcaaccccgcgccgcatgacatcctgcgcatcatg
ggtgtcgaggcgctggccaactacatgatcgacgaagtgcaggacgtctatcgtctgcaa
ggcgtgaagatcaacgataagcacatcgaagtgatcgtgcgccagatgctccagaagttc
gaagttctggattcgggcgaaacgacgctgctgaaaggtgagcatgtcgacaaggccgaa
ctggacgagatgaacgacaaggcgctgtcgcatggcatgcgcccggctcaggcagagccg
atccttctggggatcaccaaggcttcgctgcaaacccggtcgttcatttcggcggcgtcc
ttccaggaaaccacccgcgttctgaccgaggcttcggtgcagggcaaacgcgacaaactg
gtgggcctgaaagagaacgtgatcgtgggtcgtctgatcccggcgggcaccggcggtgcc
accagccgcgtgaagaagatcgcagcggatcgcgacggcaaggtgatcgacgcccgccgc
aacgaggcggaagccgcagccgcactggccgcgccgaccgcagcgtcggtggtgccggat
gtggacagcagcctggctgacacgatcgaaagccgcgagtga
DBGET
integrated database retrieval system
