Gemmobacter fulvus: KM031_18790
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Entry
KM031_18790 CDS
T07830
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
gfu
Gemmobacter fulvus
Pathway
gfu02020
Two-component system
gfu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KM031_18790
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KM031_18790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gfu03021
]
KM031_18790
Transcription machinery [BR:
gfu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KM031_18790
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF717
Motif
Other DBs
NCBI-ProteinID:
QWK92696
UniProt:
A0A975PCN6
LinkDB
All DBs
Position
p2:complement(63143..64429)
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AA seq
428 aa
AA seq
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MTQSPRHSLAARQTQGLRQHLSARQLQAIALLHLTNDGLMVHLQRRAEVNPMLRLRGGPS
VMTEPGGAEAEQPQSAPGLQDHVLRQIRLMISDSASLTLAMAFIEALDANGWLDRPLPEI
ATAAGRSLPEARALLARLQQVEPAGLFARDLRECLALQAEDRGQLSPAMLAVLARLPLLA
TGGLRAVAEAAGLRPEEVQLCLGQIRRMNPKPGAAFGNDAPPLREPDLIVTQAPEGWRVD
LNRSTLPAILLPPRSPAPDAKLRAARAEAEWLANVLERRNRTVLAVATEVLRRQQGFLDQ
GPGSLIALRQAEVAAALSLHDSTISRVSRHLLVATPHGMRSLCSFFDAAPLAARHLDLAP
SSAAIRHRLRQIIAGENPAAPLSDAALATALWREGKPLARRTVAKFRHELGIPPMLSRRR
PRAATAEA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgacccaatccccgcgccacagccttgccgcccggcagactcaggggctgcgccagcat
ctgtcggcccggcagttgcaggccatcgcgttgttgcacctgaccaatgatggcctgatg
gtgcatctgcaacgccgggccgaggtcaacccgatgttgcggctgcgcggcgggccgtcg
gtgatgacagagccgggcggcgcggaggccgaacagccgcaatcggcccccggccttcag
gatcatgtgctgcgccagatccggctgatgatttccgattccgccagcctgaccctggcg
atggctttcatcgaagcgctggatgcgaatggctggcttgaccgtccgctgcctgagatc
gccacggccgcggggcgcagcctgcccgaggcacgcgcgctgctggcgcggttgcaacag
gtggagccggccggcctctttgcccgcgatctgcgcgaatgtctggccttgcaggccgaa
gaccgggggcagctttcgcccgcaatgctggcggttctggcgcgtctgccgctgttggcg
acgggcggcttgcgggcggtggccgaggccgccgggctgcgccccgaagaggtgcagctt
tgccttggccagatccgccggatgaaccccaaaccgggggcagcgttcggcaatgatgcc
ccgccgctgcgcgagccggatctgatcgtgacgcaagcgccagagggctggcgcgtcgat
ctgaaccgcagcaccttgcccgccatcctgttgccgccgcgcagcccggcaccggatgca
aagctgcgcgccgcccgcgccgaggcggaatggctggccaatgtgctggagcggcgcaac
cgcaccgtgctggccgttgcaaccgaagttttgcggcggcagcaggggtttctggatcag
ggtccgggcagcctgattgcgctgcggcaggccgaagtggcggcagccttgtcgctgcat
gacagcaccatcagccgggtatcgcggcatctgctggtggcaaccccgcatgggatgcgc
agcctgtgcagctttttcgatgccgccccgctggccgcccgtcatctggatctggcgccc
tcgtctgccgccatccgccaccgtctgcgccagatcatcgcgggcgaaaatccggcggcc
ccgctcagcgatgcggcgctggccacggcactgtggcgcgagggcaaaccgctggcccgg
cgcacggtggcgaagttccgacacgagctgggcatcccgccgatgctgtcgcgccgccgc
ccgcgcgcggccacggccgaggcctag
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