Gallus gallus (chicken): 100857119
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Entry
100857119 CDS
T01006
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gga04515
]
100857119
Cell adhesion molecules [BR:
gga04515
]
Cadherins
Protocadherins
100857119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
FAM222A
Motif
Other DBs
NCBI-GeneID:
100857119
NCBI-ProteinID:
XP_015128643
CGNC:
65877
Ensembl:
ENSGALG00000045110
LinkDB
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Position
13:complement(805114..809826)
Genome browser
AA seq
809 aa
AA seq
DB search
MAAARQVLCLWALLGVPRVRCEPIRYSVAEEGESGSVVADVAEDAGLAPAQLSARRARIA
SPAGRQHFRLERGSGRLVVAERLDREEMCGRSRTCTLAFELLLADPLQFFPIEVSVEDIN
DHSPVFPDERVTFKIPERGDPGTRFPVGAAQDLDIGSNDIQAYSIIPENEYFTVFIQSEN
EKFIELVLEKPLDREEQPEMDFTLVATDGGSPPRTGSTEIHITVLDINDNVPVFTQKVYI
GHVLENAPEGSVVLRVVANDADEGVNGDISYQFSQSVVHRHSLFTINPKTGEIGIXKPLD
FETEKKHKLTVQAVDGGGLSSMCNVIVEVLDVNDNAPEIVVSSFNSPLPENVEPGTVIAL
FAVRDQDSGINGEITCALEEQLSFSLRPAFKNYYELVTVSTLDREERAQHMVVVTAADAG
SPPLTSTHTFSVDISDVNDNAPVFNQTSYTMYVHENNAPALLVGAVKATDADAGPNAKVS
YSVVPARGPEEEPCSCVSVNSESGGVFVLRPLDYEQLRQLEVVVSAADAGSPPLSSSVSV
RLLVVDENDNAPLVLHPSAQDSSPPSSELVPAGAEAGDLVSKVVAVDADSGQNSWLSYQL
LRATEPGLFAVGAQSGEVRLRRPPTERDAAKQKLVVLVRDNGRPPLSATAALSVLLVPGS
WDAQLPQQSPAAGEDDGSLTTSLIIALVFVSLLFLLSAAAFVACKVCKRKELSSGPVLYG
ASSVQSYVADGAAAGTLPHAYCYEVSLTTGSGNSEFKFLKPVLPSLPAQHCSTGVGGAHA
EEFPPVPVTMGDADFESPGMQSVAQLNGF
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcaaggcaagtgctgtgtctgtgggctttgctgggcgtgccgcgcgttcgc
tgcgagcccatccgctactccgtggccgaggagggcgagagcggctcggtggtggccgac
gtggcggaggacgcggggctggccccggcgcagctctcggctcgccgggcgcgcatcgcc
tcgccggccggccggcagcactttcgcttggagcgcggcagcggccgcctcgttgtcgcc
gagcggctcgatcgggaggagatgtgcggacgctcccgcacctgcacgctcgccttcgag
ctgctgctcgccgacccgctgcagttctttccgatcgaggtgtccgtggaggacatcaat
gaccactcgccggtcttcccggacgaacgagtgacctttaagatccctgagaggggcgac
ccgggcacacgtttccctgtgggggcggctcaggacctggacattggcagcaatgacatc
caggcttatagcatcattcctgagaacgaatacttcactgtcttcatacagagtgagaat
gagaaatttatagaactggttttggagaagcctctggacagagaggagcagccagaaatg
gatttcactctcgttgccacagatgggggttctccaccccgaactggttcaaccgaaatc
cacatcactgttctggatataaatgacaatgttcccgtcttcacacagaaggtttacatt
ggtcatgttttggaaaatgctccagagggctctgtggtcctcagagtggtggccaacgat
gcagatgagggtgttaatggggacatctcgtatcagttcagccaatcagtagtacacagg
cattcattgttcacgattaaccccaaaacaggcgaaattggcattngcaagcctttagat
tttgagaccgaaaagaaacataaacttaccgtgcaggcagttgatggtgggggactctca
tccatgtgcaatgtgatagtggaggtgctggatgtgaatgataatgcaccagagatcgtg
gtcagttccttcaacagcccactcccggagaatgtagaacctggaacggtaattgctctc
tttgctgtcagggatcaggattccggtatcaatggggagattacatgtgcccttgaagaa
cagctctccttctccctcaggccagcctttaagaattactacgagctggtgaccgtgagc
acgttggaccgggaggagagagcacagcacatggtggtcgtcacggcagcagatgcaggc
tctcctcctctcaccagcacccacaccttcagcgtggacatctccgatgtcaacgacaac
gcacccgtcttcaaccagacgtcgtacaccatgtacgtgcatgagaacaatgcacctgca
ctgctcgtcggggccgtgaaggcgacggatgcggacgcggggcccaacgccaaggtgagc
tattccgtggtgccagcccgtggcccggaagaagagccctgctcgtgtgtgtccgtgaac
tcggagagcggaggcgtgtttgtgctgcggccgctggactacgagcagctgaggcagctg
gaggtggtggtgagcgctgcagacgcggggtcccctcccctcagcagcagcgtcagcgtc
cgcctgctggtggtggacgagaacgacaacgcgccgctggtgctgcaccccagcgcgcag
gacagcagccctccttccagcgagctggtgcccgccggggccgaggcgggggacctggtg
agcaaagtggtggccgtggacgccgactcgggtcagaactcgtggctttcctaccagctg
ctgagggccacggagccggggctgtttgctgtgggtgcccaaagcggggaggtgcggctg
aggaggccgccgaccgagagggacgctgcgaagcagaagctcgtcgtgctggtgcgggac
aacgggcggccgccgctgtcggccacggcagcgctcagcgtgctcctcgtccccggctcc
tgggacgctcagctgccgcagcagagccctgctgcaggcgaggacgacggctccctcacc
acctctttgatcatcgccttggtctttgtgtcgctcctcttcttgctgtcggcggccgcc
tttgtcgcctgcaaggtgtgcaagaggaaggagctgagtagcgggcccgtgctttacggc
gccagcagcgtgcagagctacgtggctgacggggccgctgccgggaccctgccccacgcc
tattgctacgaggtcagcctcaccacgggctcgggcaacagcgagttcaagttcctgaag
cccgtcctccccagcctgccagcgcagcactgcagcacgggggtgggtggcgcccatgct
gaggagttccctcccgtgcctgtcactatgggggatgctgatttcgagagccccgggatg
cagtctgtggcacaattgaatgggttttaa
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