Gallus gallus (chicken): 100857645
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Entry
100857645 CDS
T01006
Symbol
PCDHB4P
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gga04515
]
100857645 (PCDHB4P)
Cell adhesion molecules [BR:
gga04515
]
Cadherins
Protocadherins
100857645 (PCDHB4P)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
RET_CLD1
FAM222A
Motif
Other DBs
NCBI-GeneID:
100857645
NCBI-ProteinID:
XP_025010683
CGNC:
65387
LinkDB
All DBs
Position
13:complement(850828..854702)
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AA seq
809 aa
AA seq
DB search
MAAARQVLCLWALLGVPRVRCEPIRYSVAEEGESGSVVADVAEDAGLAPAQLSARRARIA
SPAGRQHFRLERGSGRLVVAERLDREEMCGRSRTCTLAFELLLADPLQFFPIEVSVEDIN
DHSPVFPDERVTFKIPERGDPGSRFPVGAAQDLDIGSNDIQAYSIIPENEFFTVFIQSEN
GKFIELVLEKPLDREEQPEMDFTLVATDGGSPPRSGTTQIHIIVMDVNDNAPVFTQKVYI
GHVLENAPEGSVVLRVVAIDADEGVNGDISYQFSQSVGHRHSLFTINSKTGEIGIAKPLD
FETEKKHELTVQAIDGGGLSSMCNVIVEVLDVNDNAPEIMVSSFNSPILENVEPGTVVAL
FAVRDQDSGVNGEITCALEEQLSFALRPAFKNYYELVTVRTLDREERARHMVVVTAADAG
SPPLTSTHTFSVDISDVNDNAPAFNQTSYTMYVHENNAPALLVGAVKATDADAGPNAKVS
YSVVPARGPEEEPCSCVSVNSESGGVFVLRPLDYEQLRQLEVVVSAADAGSPPLSSSVSV
RLLVVDENDNAPLVLHPSAQDSSPPSSELVPAGAEAGDLVSKVVAVDADSGQNSWLSYQL
LRATEPGLFAVGAQSGEVRLRRPPTERDAAKQKLVVLVRDNGRPPLSATAALSVLLVPGS
WDAQLPQQSPAAGEDDGSLTTSLIIALVFVSLLFLLSAAAFVACKVCKRKELSSGPVLYG
ASSVQSYVAAGAAAGTLPHAYCYEVSLTTGSGNSEFKFLKPVLPSLPAQHCSTGVGGAHA
EEFPPVPVTMEDADFESPGMQSVAQLNGF
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcaaggcaagtgctgtgtctgtgggctttgctgggcgtgccgcgcgttcgc
tgcgagcccatccgctactccgtggccgaggagggcgagagcggctcggtggtggccgac
gtggcggaggacgcggggctggccccggcgcagctctcggctcgccgggcgcgcatcgcc
tcgccggccggccggcagcactttcgcttggagcgcggcagcggccgcctcgttgtcgcc
gagcggctcgatcgggaggagatgtgcggacgctcccgcacctgcacgctcgccttcgag
ctgctgctcgccgacccgctgcagttcttcccgatcgaggtgtccgtggaggacatcaat
gaccactcgccggtcttcccggacgaacgagtgacctttaagatccctgagaggggcgac
ccgggctcgcgtttccctgtgggggcggctcaggacctggacattggcagcaatgacatc
caggcgtacagcatcattcctgagaacgagttcttcactgtcttcattcagagtgagaat
gggaagtttatagaactggttttggagaagcctctggacagagaggagcagccagagatg
gatttcactctcgttgccaccgatgggggctctccgcccaggagcgggaccacccaaatc
cacatcatagttatggatgtaaatgacaatgctcccgtcttcacacagaaggtctacatt
ggtcatgttttggaaaatgctccagagggctctgtagttctcagagtggtggccattgat
gcagatgagggtgttaatggggacatctcgtatcagttcagccaatcagtaggacacagg
cattcattgttcacgatcaactccaaaacaggtgaaattggcattgcaaagcctttagat
tttgagactgaaaagaaacatgaacttaccgtgcaggcaattgatggtgggggactctca
tccatgtgcaatgtgatagtggaggtgctggatgtgaatgacaatgcgccggagatcatg
gtcagttccttcaacagcccaatcctggagaatgtagaacctggaacagtggtcgcactc
tttgctgtcagggatcaggattccggtgtaaatggggagattacatgtgcccttgaggaa
cagctctccttcgccctcaggccagccttcaagaactactacgagctggtgactgtgcgc
acactggaccgggaggagagagcacggcacatggtggtcgtcacggcagcagatgcaggc
tctcctcctctcaccagcacccacaccttcagcgtggacatctccgatgtcaacgacaac
gcacccgccttcaaccagacgtcgtacaccatgtacgtgcatgagaacaatgcacctgca
ctgctcgtcggggccgtgaaggcgacggatgcggacgcggggcccaacgccaaggtgagc
tattccgtggtgccagcccgtggcccggaagaagagccctgctcgtgtgtgtccgtgaac
tcggagagcggaggcgtgtttgtgctgcggccgctggactacgagcagctgaggcagctg
gaggtggtggtgagcgctgcagacgcggggtcccctcccctcagcagcagcgtcagcgtc
cgcctgctggtggtggacgagaacgacaacgcgccgctggtgctgcaccccagcgcgcag
gacagcagccctccttccagcgagctggtgcccgccggggccgaggcgggggacctggtg
agcaaagtggtggccgtggacgccgactcgggtcagaactcgtggctttcctaccagctg
ctgagggccacggagccggggctgtttgctgtgggtgcccaaagcggggaggtgcggctg
aggaggccgccgaccgagagggacgctgcgaagcagaagctcgtcgtgctggtgcgggac
aacgggcggccgccgctgtcggccacggcagcgctcagcgtgctcctcgtccccggctcc
tgggacgctcagctgccgcagcagagccctgctgcaggcgaggacgacggctccctcacc
acctctttgatcatcgccttggtctttgtgtcgctcctcttcttgctgtcggcggccgcc
tttgtcgcctgcaaggtgtgcaagaggaaggagctgagtagcgggcccgtgctttacggc
gccagcagcgtgcagagctacgtggctgccggggccgctgccgggaccctgccccacgcc
tattgctacgaggtcagcctcaccacgggctcgggcaacagcgagttcaagttcctgaag
cccgtcctccccagcctgccagcgcagcactgcagcacgggggtgggtggcgcccatgct
gaggagttccctcccgtgcctgtcactatggaggatgctgatttcgagagccccgggatg
cagtctgtggcacaattgaatgggttttaa
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