Gallus gallus (chicken): 100857875
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Entry
100857875 CDS
T01006
Symbol
NECTIN1
Name
(RefSeq) nectin-1 isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
gga
Gallus gallus (chicken)
Pathway
gga03266
Virion - Herpesvirus
gga04514
Cell adhesion molecule (CAM) interaction
gga04517
IgSF CAM signaling
gga04520
Adherens junction
gga05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
100857875 (NECTIN1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100857875 (NECTIN1)
04517 IgSF CAM signaling
100857875 (NECTIN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100857875 (NECTIN1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100857875 (NECTIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gga04515
]
100857875 (NECTIN1)
04090 CD molecules [BR:
gga04090
]
100857875 (NECTIN1)
Cell adhesion molecules [BR:
gga04515
]
Immunoglobulin superfamily
Nectin family
100857875 (NECTIN1)
CD molecules [BR:
gga04090
]
Proteins
100857875 (NECTIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_3
Ig_2
ig
I-set
C1-set
Insulin_TMD
Ig_PVRIG
TM_ErbB1
Syndecan
DUF4381
Motif
Other DBs
NCBI-GeneID:
100857875
NCBI-ProteinID:
XP_024999005
CGNC:
65186
LinkDB
All DBs
Position
24:4060551..4132678
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AA seq
523 aa
AA seq
DB search
MASQLQTSCRASWWTIGVCILAAALFPGLQAQTVLVNDTVSGYIGTDVVLHCSFTNPLPN
VKITQVTWQKVTNGTKQNVAIYNPAMGVSILPPYKERVTFRNPSFKDGTIQLSRLELEDE
GVYICEFATFPTGNRESQLNLTVLAKPTNRMEGTTRPLIAKSGRTEKILVATCISSNGKP
PSTVTWDTKLKGEAEFQEIRNSNGTFTVISRYRLVPSREAHRQQLMCVVNYQLDRFTDSI
TLNVQYEPEVTIEGFDGNWFLNRKDVKLICKSDANPPAHTYEWKLPNGTLPGSVEIQNNT
IYFKGPVSYSVAGTYICEASNAIGTRSGLVEVNVTDKPLPQGALGGIIGIVGGVIAAALI
LGVAVTVFIVYRRQQKDRTEADHDLIDLPPSHKPAPPPKRKQELKSHLTAEDIQVVHLDN
MTHEEELQKLPLQPPYYDMAASEPSAYTDKLNFGKCHSEIPNASDYLTRCYSHDGRYLQK
IPHVYAPLSDLPQDLYPHHSDISFCCPPPGSRAPYICPKEQYV
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacagctgcagacaagttgccgtgcatcttggtggactatcggagtttgcatc
ctggcggccgcgctctttccagggctgcaagctcagactgtcttagtcaatgacacagtc
tcggggtacattgggacagacgtcgtcctgcactgcagcttcaccaacccgctccccaat
gtgaagatcacgcaggtcacgtggcagaaggtcaccaacggcaccaagcagaatgtggcc
atctacaaccccgccatgggggtctccatcctcccaccctacaaagaacgggtgactttc
cggaacccttccttcaaagatggcaccattcagctctctcggcttgagttggaggatgag
ggagtttacatctgtgagtttgccaccttcccgaccggcaaccgggaaagtcaactgaac
ctcacagtgctggccaagcccacgaatcggatggagggcaccacgcggccgcttatcgcc
aagtctggcaggacagaaaagatcttggtagccacttgcatctcctccaacgggaagccc
cccagcaccgtcacctgggacaccaagctcaaaggggaagcagagtttcaggagatccgg
aatagcaacggcaccttcacggtgatcagccggtaccgcttggtgccgagccgcgaagcc
caccggcagcagctcatgtgtgtggtcaactaccagctggaccgcttcacggacagcatc
accctcaacgtgcagtatgagccagaagtcaccatcgagggctttgatggcaactggttc
ctcaatcggaaagatgtcaagctgatatgcaagtccgatgccaaccccccggctcacacc
tacgaatggaagctgccaaacgggactctgccagggagtgtggaaatccagaacaacacc
atctatttcaagggtcctgtctcctacagcgtggctggcacctacatctgcgaggcctcc
aacgccatcggcacgcggtcgggcttggtggaagtcaatgtcacagacaagccactacct
cagggcgccctgggaggcatcattggcatcgtgggaggtgtcatcgccgcagctctcatc
cttggcgtggctgtcaccgtcttcattgtctacaggaggcaacagaaggaccgcacagag
gcagaccatgacctcattgacttgcctccctcccacaaacctgcccctccgccgaagagg
aagcaggagttgaaaagccacctgactgctgaagacatccaggttgttcacttggacaac
atgacgcatgaggaagagctccagaagctccccctgcagcccccatactacgacatggca
gccagtgagccctctgcctacaccgacaagctgaactttggaaagtgtcactcagagata
ccgaatgcgagtgattacctgacccgctgctactcacacgacggtcggtatctgcagaag
atcccccacgtctacgccccgctgtcagacctcccacaagatctctaccctcaccactcc
gacatctccttctgctgcccccctcctggctcccgggctccgtacatctgtcctaaggaa
cagtatgtttaa
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