KEGG   Gallus gallus (chicken): 100857925
Entry
100857925         CDS       T01006                                 
Symbol
TRPC2L
Name
(RefSeq) short transient receptor potential channel 2-like
  KO
K10803  DNA-repair protein XRCC1
Organism
gga  Gallus gallus (chicken)
Pathway
gga03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:gga00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100857925 (TRPC2L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gga03400]
    100857925 (TRPC2L)
DNA repair and recombination proteins [BR:gga03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     100857925 (TRPC2L)
SSDB
Motif
Pfam: XRCC1_N
Other DBs
NCBI-GeneID: 100857925
NCBI-ProteinID: XP_015136384
CGNC: 65139
Ensembl: ENSGALG00000017493
UniProt: A0A8V0XCR3
LinkDB
Position
1:195602631..195605810
AA seq 382 aa
MAPVKISHVVSFSSQDPRYPVENLLCPDGRRPWLSCPQERSRQLKVELQLERAVPIGYID
VGNWGCAFLQIEVGRSSWPLDRPYLTLVPSVALMTPADSKLDRNRCGVRMFKEADFLVLA
AGQKWDRLRLTCSQPFRHRGQFGLCFIRVRTPLDPELCHPAVENAELKGSPQRSSPASSC
QIPSAEARLSSQEEEQLKSSLQQLEPSAACRAWSPAHLSRPARMVLSAAQSRAVRPPPRG
SAGAPRSSTEQGQPAARGAALEVPAAPKRARRQPGSRQRARRAVGSSLQPLSRNPGPGGR
ATTHGHNASGGESSGGEMALCPICSGSFSTALLPAHASRCGEEDSDAEVELLSSASSPVP
CPICGLCFTAAEVERHCSTCGE
NT seq 1149 nt   +upstreamnt  +downstreamnt
atggctccggtgaagatcagccacgtcgtgtccttctcctcccaggacccccggtacccg
gtggagaacctcctgtgccccgatggccgccggccctggctcagctgcccccaggagcgc
agccggcagctgaaggtggagctgcagctggagagagccgtccccattggctacatcgac
gtcgggaactggggctgtgccttcctgcagatcgaggtgggtcgctcctcgtggccgctc
gatcgcccctacctcaccctggtgcccagcgtcgcgctgatgacgccggccgactccaag
ctggaccgcaaccgctgcggcgtccgcatgtttaaagaagcagacttcctggtgctggca
gcgggacagaagtgggaccgcctgcggctcacctgcagccaacccttccgtcaccgcggg
cagttcgggctctgcttcatccgcgtgagaacaccactggaccccgagctgtgccaccct
gcagtggagaatgctgagctcaaaggcagcccccagcgctccagccctgcctcctcgtgc
cagattccctctgcagaagcacgcctgagctcgcaggaggaggagcagctgaagagcagc
ctgcagcagctggagcccagcgctgcgtgccgtgcctggagcccggcacacctcagccgc
ccggcacgcatggtgctgtcggcagctcagagccgtgccgtgagacccccaccacgaggc
agtgccggtgccccgcggagcagcacggagcagggacagcctgcagcacggggggcagca
ctggaagtcccagcagcccccaaacgcgcccgcaggcagccgggcagcaggcagagagct
cgcagagctgtgggcagctccctgcagcctctctccaggaatcctgggccaggagggaga
gccacaacgcacggccacaacgcgagcggaggggagagcagcggtggggagatggctctg
tgccctatttgctcaggttccttcagcacagcgctgctccctgctcacgcctcccgttgc
ggcgaggaagactccgacgccgaggtggagctgctttcctctgctagcagcccggtgccg
tgccccatctgcgggctctgcttcactgcagcagaggtggagaggcactgcagcacctgt
ggggagtga

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