Gallus gallus (chicken): 100858397
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Entry
100858397 CDS
T01006
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
gga
Gallus gallus (chicken)
Pathway
gga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100858397 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gga03019
]
100858397 (CNOT1)
Messenger RNA biogenesis [BR:
gga03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100858397 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100858397 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
100858397
NCBI-ProteinID:
NP_001264062
CGNC:
64685
Ensembl:
ENSGALG00000002301
LinkDB
All DBs
Position
11:complement(1412476..1466005)
Genome browser
AA seq
2376 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVIK
LSKVQEVIFGLALLNSFSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCTSIEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLDFKVVTYE
LDHPGFQIRDSKGLHIVVFGIQRGLGMEVFPVNAIYRPWKHAEGQLSFIQHSLINPDIFC
FADYPCHAVTTDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDSLAGMASL
SLGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTQNQTTGFSGIGGLSSQLPVGG
LTTGSLTGIGTGALGLPAVNNDPFVQRKLSTSGLSQPTFQQSKMKPSDLSQVWPEANQNF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVA
AHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQRDMMEQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQAWATDDVAQIYDKCMTELE
QHLQSIPHTLAMNPQAQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHN
PAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHEV
RQGEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLE
LISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLL
VLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINI
APRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNIQLINALVL
YVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSH
THYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNH
EFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaagaaatacagcacattgtgaataggcacggt
cccgaggcagacaggcatttactacgctgtctattctcgcacgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccatcagactcaatttctgatccaggagtgtgcgtcg
ctgattacaaaaccaaactttatctcgacgctgtcctacgccattgacaatccattgcac
tatcagaagagtctaaagccttcaccccatttatttgcccaattgagtaaagtcatcaaa
ttaagtaaagttcaagaggtgatatttggtctcgctttactgaactctttcagctcagat
ctacgaggttttgctgcccagtttatcaaacagaaactcccagatcttttacgctcttac
attgacgcggacgtcagtggaaatcaagaaggtggcttccaagatattgcaatagaggtc
ctgcaccttctcctctcccatctcctttttgggcagaagggagcctttggggtgggacag
gaacagattgacgctttcctcaaaacattacgtagagattttccccaggagcgttgccct
gtggtgcttgcaccacttctataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagccaaaacaatgatggagagttctctggcagactttatgcaa
gaagttggctatggcttttgtacaagcattgaagaatgtcgcaacataatcatgcagttt
ggagtccgggaggtgacggctgcccaggttgccagggttctggggatgatggctcgaacg
cattcggggttgacggatggtattccattacaatctatttcggctcctggcagtggaatt
tggagcgatgggaaagataaaagtgatggagcacaagcccatacctggaatgtggaggtc
ctaattgatgttcttaaagagctgaatcctagcctggatttcaaagtagtaacgtatgaa
ttggaccacccaggatttcagattcgtgacagcaaaggcctgcatattgtggtgtttggc
atccagagagggctaggcatggaagtttttccagttaatgccatatacagaccttggaag
catgcagagggccagctctccttcattcaacattccctcataaacccggacatcttttgt
tttgctgactacccttgtcatgctgttaccacagacatcctgaaagcaccaccagaggat
gacaatcgagaaattgctacatggaagagcctggatttgatcgaatctctgttacggttg
gcagaagtgggacagtatgagcaggttaagcagctcttcagttttcccatcaagcattgc
ccagatatgttggtattggccttattgcagatcaacacttcctggcataccttgcgccat
gaactcatctccacgctcatgccaatcttccttggcaaccatcccaattctgccatcatt
ttgcactatgcatggcatgggcagggtcagtctccttcgattcgccagcttatcatgcat
gcaatggcagaatggtacatgagaggggagcagtatgaccaggcaaaattgtcacgtatt
cttgatgtggcgcaagacttgaaggccttgtcaatgctgctaaatggtactccgtttgcc
tttgttattgaccttgctgcacttgcctctcgacgagaatacctcaaacttgacaaatgg
ctcacagacaaaattcgggagcatggggagcccttcatccaggcctgcatgaccttctta
aagagaagatgtccatctatcctaggtggccttgctccagaaaaagatcaacccaaaagt
gctcagcttcctccagaaaccttggcaactatgttggcatgcctgcaggcttgtgctggg
agtgtttctcaggagctgtcggagaccatcctcaccatggtagccaactgcagtaatgtc
atgaacaaggccagacagccaccacctggagtcatgcccaaaggccgcccgcccagcgcg
agcagcctggatgccatctctcctgtgcagattgactcgcttgcaggaatggcatctctg
agtttaggtggctcggctgctcctcacacccagagcatgcaaggcttccctccaaacttg
ggctctgcgttcagtactcctcagtcaccagcaaaagcgtttccccctctttccacccaa
aaccagacaacaggtttcagtggcattggaggactctcttcacagcttccagtaggtggt
cttactacgggtagcctgactggcataggaactggagccctgggccttcctgcagtgaac
aatgacccattcgtgcaaaggaagctgagcacatctggactgagccagcctacgttccag
cagagtaagatgaaaccttctgacttatctcaggtgtggccagaggctaatcagaacttt
agcaaagaaatagatgatgaggcaaacagctacttccagcgtatctataaccatccacca
catccaaccatgtctgtagatgaggtcttggaaatgctgcagaggtttaaggactccaat
attaaacgggaacgagaagtgtttaactgtatgctgaggaacttgtttgaggaataccgt
ttctttccccagtacccagacaaagagctgcacataacagcctgcctctttggtgggata
atagagaaaggactggttacttacatggctttgggcctggcccttcgctacgttcttgaa
gccttacgaaagccttttgcgtccaaaatgtactattttggtattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctattagtcac
tttatacagttccctcatcacttgcaggagtacatagaatacggacagcagtctagagat
cctcctgtgaaaatgcagggttcaatcaccacccctggaagtattgcacttgcccaggct
caggcccaggcccaggttccagcaaaggctcctcttgctggccaagtcagcactatagta
accacctcaaccaccaccactgttgcaaaaaccatcacgatcactcgaccaactggagtc
agcttcaagaaagatgtgccgccttccattaatactaccaacattgatacactgttagta
gcaacggatcaaactgagagaattgtggaacctccagagaacgtccaggaaaaaattgct
ttcatcttcaataatctgtctcagtcaaacatgacacagaaggttgaagaactgaaggaa
acagtgaaagaagagttcatgccttgggtatcgcagtatctcgtgatgaagagagtcagc
attgagccaaattttcacagcttatattcaaacttccttgacacccttaagaatccagag
tttaataaaatggttctgaatgaaacttacagaaatatcaaggtgctactgacatcagat
aaggctgcagccaacttctccgaccgttccttgttaaagaaccttggtcactggctggga
atgattaccctggctaaaaataaacccatcttgcacacggatttggatgtgaagtcacta
ctactggaagcgtatgtgaagggacagcaggaattgctttatgtagtaccatttgttgcc
aaagtcttagaatccagtgtcaggagtgtggtcttcaggcctccaaacccatggacaatg
gccattatgaatgttttagctgagctgcatcaagaacatgatctaaaattgaatctgaag
tttgagattgaagtgctctgcaagaatcttgcactggacatcaatgagctgaaacctgga
agtctcctgaaagataaggatcgtctgaaaaatctggatgagcagctgtctgctccaaag
aaggatgtgaagcagccagaagagctaccacccatcacaacaaccaccgcttctacaact
ccagctaccagcaccacttgtacagccacagttcctccacagccccagtacagttatcat
gacatcaatgtctattcattaggaggactggctccacacattaccttaaatccaacgatc
ccgctgtttcaggcccacccccagctgaagcagtgtgtgcggcaggctatagagcgagcg
gtgcaggagctcgtccatcccgtggtcgatcggtccattaagattgccatgactacttgt
gagcagatagtcaggaaggactttgcactggattcggaggagtcacgaatgcgtgtggct
gcacaccatatgatgcggaacttgactgctgggatggccatgatcacctgcagggaacct
ttgctcatgagcatagctaccaacttgaagaacagttttgctactgcgctgagggcagcc
tccccacaacagagggacatgatggagcaagcagctgcccagctggcgcaggataactgt
gagctggcgtgctgctttatccagaagacagctgtggaaaaagcaggccctgaaatggac
aagaggctggcgactgaatttgagctcagaaaacatgctagacaagagggtcgtcggtac
tgtgatcctgttgtgttaacttaccaagctgaacggatgccagaacagatcaggttaaag
gttggaggtgtggacccaaaacagctggctgtttacgaagagttcgcacgtaacgtcccc
ggcttcttgcctaccaatgacttaactcagcctacaggattcttggctcaacctatgaag
caagcttgggccacagatgatgtagcacaaatctatgacaaatgcatgacagaactggag
cagcacctacagtccattccccatactctggccatgaatcctcaagctcaagcattacgc
agcctcctggaggctgtggtggtcgctcggaactcccgtgatgccatcgctgcgcttgga
ctgctgcagaaggctgtagagggcttactggatgccaccagtggggcagatgctgacctt
ctgcttcgctatcgtgagtgtcacctgctggtgctgaaggctctgcaggacggccgtgcg
tatggatctccgtggtgtaacaagcagattaccaggtgcctgattgagtgtagagatgag
tacaagtacaacgtggaagctgtggagctgctaatccgcaatcacctggttaacatgcag
cagtatgatcttcacctggcacagtcaatggagaacggcttgaactatatggctgtggca
tttgccatgcagttggtaaagatccttcttgtggatgagagaagtgttgcccatgtaaca
gaggcagatctgttccacaccatcgagacgctcatgaggattaatgctcattccagaggg
aatgccccagaagggttaccccagttgatggaagtggtccgatcaaactacgaagcaatg
attgaccgtgctcacggaggtcccaatttcatgatgcattctggaatttcccaagcctct
gagtatgatgatccaccaggtctgagggagaaggcagaatacctgctgagggagtgggtc
aacctctaccattctgctgcagcgggccgcgacagtaccaaagcgttctctgcgtttgtt
ggacagatgcaccagcaagggatcctgaaaacagatgacctgatcacccgctttttccgg
ctttgcactgaaatgtgtgttgaaatcagctatcgtgctcaggctgagcaacagcacaac
cctgctgccaaccccacgatgatccgggccaagtgctaccacaatctggatgcctttgtg
cggcttattgcactgcttgtgaagcactctggagaagcaaccaacaccgttacgaagatc
aacctcctgaacaaggttcttggtattgtggtgggagttcttctgcaagaccatgaagtt
cggcagggtgagtttcagcagcttccttaccatcgcatcttcatcatgttgctgttggaa
ttaaatgctcctgagcatgtgttggagaccatcaacttccagacgctcacagctttctgt
aacacatttcacatcctgaggcctacaaaagctccaggttttgtttatgcctggctggaa
ctgatctcccatcggatatttattgcaagaatgctggcacatacaccacagcagaagggt
tggcctatgtatgcccagttactgatcgatcttttcaagtacttggctccttttctcaga
aatgtggaactcaccaaacctatgcaaattctttacaagggcactctgcgtgtgttgctg
gtcttgttgcatgatttcccagaatttctttgtgactaccattatgggttctgcgatgtc
atcccacctaactgtattcagttaaggaatttgatcctgagtgccttcccacggaacatg
aggcttccagaccctttcacccccaatctgaaggtggacatgttgagtgaaattaatatt
gctccacgaattctcaccaatttcacgggagtgatgccacctcagttcaagaaagacttg
gattcctatctcaaaacccgatctccagtcacttttttgtctgacttgcgcagcaactta
caagtatcaaatgaacctggcaaccgctacaacatccagctgattaatgccctggtgctc
tacgtaggtactcaggctattgcgcacatccacaacaaaggcagcacaccctccatgagc
accattacccactcagcacacatggacatcttccagaatttggcagtggacctggacacc
gaaggtcggtacctcttcctgaatgcaattgccaatcagctgcgataccccaacagtcat
acccactacttcagctgcaccatgctttacctgtttgcagaggccaacactgaggctatc
caggagcagatcacaagggttctcttggaacgactgattgtaaataggcctcatccctgg
ggtctcctcattactttcatcgagctgataaaaaacccagcatttaagttctggaaccat
gaatttgttcactgcgctccagaaattgagaagttgttccagtcggttgcacagtgctgc
atggggcagaagcaagcccagcaagtaatggaggggactggtgccagttag
DBGET
integrated database retrieval system
