Gallus gallus (chicken): 101747634
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Entry
101747634 CDS
T01006
Symbol
SMARCC2
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
gga
Gallus gallus (chicken)
Pathway
gga03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101747634 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gga03021
]
101747634 (SMARCC2)
03036 Chromosome and associated proteins [BR:
gga03036
]
101747634 (SMARCC2)
Transcription machinery [BR:
gga03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101747634 (SMARCC2)
Chromosome and associated proteins [BR:
gga03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101747634 (SMARCC2)
PBAF complex
101747634 (SMARCC2)
GBAF(ncBAF) complex
101747634 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
101747634
NCBI-ProteinID:
XP_025001256
CGNC:
67132
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All DBs
Position
33:7007457..7016014
Genome browser
AA seq
1252 aa
AA seq
DB search
MAVRKKDGGPNVKYYEASDTVSQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLHQEIEPKLLSKLKDIIKRHQGTVTEDKNNASHVVCP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVSDEKSPVARRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYNKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETAGKDEEENGTGSKGEQAKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQSDGDAKTGRKSKEIEDLVTESVKGKPELQSSASQQMLNFPDKSKEKP
ADMQNFGLRTDMYTKKNIPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTASEEPE
RIEEGGAEETRAETAPVEEKKEVKEQRDGSAEEEVKEKVGDVAKKEEEKSKEPEGEKEVE
KGESDSAGELEKEKEAKEPPEETPKEPSEPEAERKAKVERDIGEGNLSTAAAAALAAAAV
KAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADR
QAFHMEQLKYAEMRARQQHFQHLQQQQQQQPPPLPPXAQPLPAAGTPLAPAAHSLAAPPT
PAMVAPAEPGGQLMPGVPPPQPPPPPGAPQPGLAIPHAPVPFPGQQPPSQSLGGNLGGSG
HPSVPGNAPTALPFAPPPSAIPLSMANPLADSIATTFPANPPALPLHGALASSMPPGGLP
PPPPHPPGLALPLLGGGSPAAHSPAIVAAVQGSLLPTPGLLADQGPPLQTDPIAPSPSTA
TPVPPHSEPLSPPPPTAAEDPAPKGPPLPSPPSRPPFPPPASVFFYDCLDVI
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtcaaatactacgaggcctcggacacc
gtcagccaattcgacaacgtccgcctttggctcggcaagaactacaagaagtacatccag
gccgagccccccaccaataagtcgctgtcgagtctggtggtgcagctgctgcagttccag
gaggaggtgttcgggaagcacgtcagcaacgcgccgctcaccaaactgccgatcaaatgc
ttcctggatttcaaggcggggggagccctgtgccacatcctggctgctgcttataagttc
aagagcgaccaaggatggcggcgtttcgatttccagaatccctcgcggatggaccgcaac
gtggagatgtttatgaccatcgagaagtccctggtgcagaacaactgcctgtcccggccc
aacatcttcctgcaccaggagatcgaacccaaactgctgagcaaactgaaggacatcatt
aagaggcaccagggcacggtgaccgaggacaaaaacaacgcgtcccacgttgtgtgcccc
gtccctgggaacctggaggaagaggagtgggtccggccggttatgaagcgagacaagcag
gtgctgctgcattggggttactaccccgacagctacgacacctggatcccagccagtgag
atcgaggcctctgtggaggatgcaccgactccggagaagccccggaaggtccacgccaag
tggatcctggacacggacaccttcaacgagtggatgaacgaggaggactatgaggtgtcc
gatgagaagagccccgttgcccgcaggaagaagatctcagcaaagactctgacagatgag
gtgaacagccctgattcagatcggagggacaagaaggggggcaactacaagaagagaaag
cgttcgccttcgccttcacccaccccggaagccaagaagaagaacgcaaagaagggaccc
tccaccccatacaacaaatccaagcgtgggcaccgcgaggaggagcaggaggacctgacc
aaggacatggatgagccctcacccgtccccaacgtggaggaggtcaccctgcccaaaaca
gtcaacaccaagaaggactcagagtctgcgcccgttaaggggggcaccatgacggacctg
gatgaacaggaggatgagagcatggagacggctggcaaggacgaggaggagaacggcacc
gggagcaaaggggagcaggccaagaaccccgacctgcacgaggacaacgtgacggagcag
acccaccacatcatcatccccagctacgccgcctggtttgactacaacagcgtccacgcc
atcgagcgccgagccctgcccgagttcttcaacggcaaaaacaaatccaagacccccgag
atctacttggcctaccgcaacttcatgatcgatacgtaccgcctgaacccccaggagtac
ctcacctccaccgcctgccgccgcaacctggcaggtgatgtctgtgccatcatgagggtg
cacgccttcctggagcagtggggcctcatcaactaccaggtggacgccgagagccggccc
acccccatgggccccccacccacctcccatttccacgtgttggccgatacgccctccggt
ttggtccctctgcagcccaagacgcctcagggccggcagagcgatggcgacgccaagacg
ggccgcaagagcaaagagatcgaagacctcgtcaccgagtcggtgaaagggaagccggag
ctgcagagctcggcctcgcagcagatgctgaacttccccgacaagagcaaggagaagccg
gccgacatgcagaacttcgggctgcgcaccgatatgtataccaagaagaacatcccctcc
aagagcaaagctgcagccagcgccacgagggaatggacggagcaggagacgctgctgctg
ctggaggccctggagatgtacaaggacgactggaacaaggtgtcggagcacgtgggcagc
cgcactcaggatgagtgcatcctgcatttcctgcgcctgcccatcgaggacccctacctg
gaggactcggaggcgtctttggggccgttggcctatcagcccatccccttcagccagtct
ggtaaccccgttatgagcaccgtcgccttcctggcctccgtcgtcgacccccgtgtcgcc
tcggctgctgctaagtcggcgctggaggagttctccaagatgaaggaagaggtgcccacg
gcgttggtggaagctcacgtccgtaaggtggaggaggctgccaaggtgacgggcaaagct
gaccctgcgttcggcttggagagcagcggcatcgccggcaccgcctcggaggagccggaa
cggatcgaggagggcggtgcggaggagacgcgcgcggagacggcgccggtggaggagaag
aaggaggtgaaggagcagcgtgacggcagtgctgaggaggaggtgaaggagaaagtgggg
gacgtggccaagaaggaggaggagaagagcaaagagcccgagggtgagaaggaggtggag
aagggcgagagcgacagcgcaggggagctggagaaggagaaggaggcgaaggagccgccc
gaggagaccccgaaggagccatcagagcccgaagctgagcgcaaagccaaagtggagcgg
gacatcggcgaagggaacctctccactgccgctgctgctgcgctggcggccgctgctgtg
aaggcaaagcacctggcggccgtggaggagcggaagatcaaatccttggtggcgctgctg
gtggagacgcagatgaagaaactggagatcaaactgcggcacttcgaggagttggagacc
atcatggaccgcgagcgcgaggcgctggaataccagaggcagcagctgctggccgaccgc
caggccttccatatggagcagctgaagtacgccgagatgcgcgcccgccagcagcacttc
cagcacctgcagcagcagcagcagcagcagccccccccgctgcccccgngcgctcaacct
ctgcccgccgccggaacccccctggcccccgccgcccactcgctggctgcgccgcccacc
cccgccatggtggcccccgctgaaccgggggggcagctgatgcctggggtgccccccccg
cagccccccccaccaccgggagcaccgcagcccggcctggccatcccgcacgccccggtg
ccgttccccgggcagcagccgccgtctcagagcctgggggggaacctgggtggcagcggc
cacccctccgtgcccggtaatgcgcccacggcgctgcccttcgctccgcctccatccgcc
atcccattgagcatggctaaccccctcgccgactccatcgccaccactttccccgctaac
ccgcccgccctcccgctgcatggggccctggccagcagcatgccgcccggggggctgccc
cccccccctcctcacccacccggcctggccttgccgttgctgggggggggctcgccagcc
gcgcacagcccagccatcgtggccgccgtgcaggggagcctccttcccacccctgggctg
ctcgcagatcaaggcccccccctgcagacggaccccatcgctcccagccccagcacggcc
acccccgtccccccacacagtgagcccctctccccccccccacccaccgcggctgaggac
cccgcccccaaaggaccccccctgccctcccccccctcgaggccccccttccccccccca
gcttcagtatttttttatgactgtctggatgttatttaa
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integrated database retrieval system
