KEGG   Gallus gallus (chicken): 101751335
Entry
101751335         CDS       T01006                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gga03400]
    101751335 (MDC1)
DNA repair and recombination proteins [BR:gga03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    101751335 (MDC1)
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 BRCT
Other DBs
NCBI-GeneID: 101751335
NCBI-ProteinID: XP_015128654
CGNC: 70760
LinkDB
Position
16:2745805..2754194
AA seq 1581 aa
MQRRRPRGLGAVGVTGWGSAPRQPLASDTEDEEPPRCPSAGDTASPRVVPESDPEESDVS
PNVRVLRKRLPPPSAVGCAQLDVGGPKKRRLEPKTPPNPGVEPRNPSVSSEEVVGTDVEG
WRGSDPTLGIESDTDDEEQPKSAVSHPNRHQSALEGSVDPNGAQRTPNPGVGSTGNGLCV
LTVDSDTDEEAELLPRIRQPEIQQTAPNVPQTVRVGVQNPQFGGPGGPNEGFQVVAVGSG
TDGEVESSGLGVGSPQGAQWGLPVDSDTDVEESGAHPDVERPQKLQLNPNVPTVGMETPT
PPPGGPQEGREVLTADSDTDLEDHGADPDGLCSTTHRATQNAPNPPGIEADGPQKGRRAP
EVGSDPDVGGTPSGEPDPDVGGPKSGRQLPLVDSDTDVEEDGACPGIPIGTPKPLVGAAV
VMETPNPDRKGAESGCQSLEVDSDTDVEGEELNPDVPHLENPKTPQSAPQNPAVVMETPN
PHLKGSQSGGQNLEVGSDTDVEGEDVNPDVPDLKNPKRPQITPKDPAVVVGTPNSDLRGS
QVGGRSVEVDSDTDVEELNADVPRPENRRAPQSALKDPAVVMETPNPDRKGAQSGCQSLE
VDGDTDVEAEELNPDVPHLENPKTPQSAPQNPAVVMETPNPHLKGSQSGGQNLEVDSDTD
VEGEDVNPDVPDLKNPKRPQITPKDPAVVVGTPNSDLRGSQVGGQGVKVDSDTDVEELNA
DVPHPENHRAPQSALKDPAVVMETPNPDRKGAQSGCQSLEVDGDTDVEAEELNPDVPHLE
NPKTPQSAPQNPAVVMETPNLHLKGPQRGGQNLEMDSDTDVESEDVNPDVPDLKNPQRPQ
ITPKDPAVVMETPNPHLKGCQVGGQSTEVDSNTDVKAEELNPDVPHLKNPKTPQSALQNP
AVVMETPNPGLKGSQVGDRSVEVDSDTDVEGEDVNPDVPDPKDPKRPQITPQDPAVVVKT
PNPDVVGPNGDSDTDEDLSSVGAPQTPKATRGVTDSGAVDASAPDVAPDVAVTAPIPAVP
PPMSLWGDSDTDGEEEVAPTPHIQRFRSRIRLRNPNVGSTAMGGGANVGQTDPKCGKLTP
KRQSSPPEQRGDGGVGGTAPKRHNSAPHMDAESPEPNDGTQRRSGETSRMGGDTAAAPAP
KSPDSAPNLGRPNGGTDVTESDTEAEDDPDLFLAPTQSFLPPTQSFLPPPTQDPTPAWDP
EEPTQCFYHPEEEEGKEEEPPQSRMATRVAAVTPAQEDSGTIRAPSEAVAEGPRRSQRQT
RSRGGGASREGGGAKAAGGGATADPAPLRRSPRLLARSSPAEPKRGRGQDEPRPPPAPRP
RRGGHAPSQKKAQEEEPTDITRAQLRPRGSSASSSPKVLFTGVVASPGMEAALGALGGSM
AASVFDCTHLVTDRVRRTIKFLCAVARGIAIVTPTWLHESSRSGRILPPGPFLVRDSQQE
QHFGFSLSQALSRARRRPLLQGYEIHVTPSVRPEPEHMRDIITCSGGTFLPTMPCTYGPR
RLVISCPEDSGRWGPALGAQLPLLSAELLLTGLLRQQLQLQPFLLTPPGPPQDPPVSPRR
LRDRAQRDPPGTRRRGRLGVK
NT seq 4746 nt   +upstreamnt  +downstreamnt
atgcagcgaaggcgtccccggggcctcggcgccgtgggggtcacagggtgggggtcagcg
ccgaggcagcccctcgccagcgacacggaggacgaggagccgccccgatgtcccagtgct
ggagacaccgcctccccccgagtggtgcctgagagcgacccggaggagtcggatgtgtcc
cccaacgtccgcgtgctccgaaaacgcctcccccccccctcggctgtgggctgcgcccag
ctggacgtcgggggacccaaaaagcgccgtttggagcccaaaacgcccccaaatcccggt
gttgagccccgaaatccctccgtgagctccgaggaggtggtgggtacagatgtggagggg
tggaggggcagcgatccaactctgggcatcgagagcgatacggacgatgaggaacagcca
aaatctgctgtttctcacccaaaccgtcaccaatccgccctcgagggaagcgttgacccc
aacggggctcaaaggaccccaaatccgggcgtggggagcaccggaaatgggctctgcgtg
ctcacggtggacagcgacaccgacgaggaggctgagctccttccgcgcattcggcagccg
gaaatacagcaaacagccccaaatgtgccccaaaccgtcagggtgggggtgcagaaccca
cagtttgggggtcccggaggtccaaacgagggctttcaggtggttgcggtgggcagcggt
acggacggggaggtggagagctcaggtctgggggttggaagtccccaaggcgcgcagtgg
gggctcccggtggacagcgacacagatgtggaggaaagcggagcgcatccggatgtggaa
cggccccaaaagcttcagctgaacccaaacgttcctacagtagggatggagaccccaacc
ccacctcccgggggtccccaggagggacgtgaggtgctcacggcggacagcgatacggac
ctggaggaccacggggcggatccggatggtctgtgctccaccacccaccgggcgacccaa
aatgcaccaaacccccccggtattgaggctgacggtccccaaaagggacggcgggcaccg
gaggtgggcagcgatccggatgttggcggcacaccaagcggagagccggatccagatgtt
gggggacccaaaagcgggcggcagctgcctctggttgacagcgatacggatgtggaggag
gacggtgcgtgtccagggatccccataggcaccccaaagcccctcgttggcgcagctgtg
gtgatggagaccccaaatcctgaccgtaaaggagctgagagcggatgtcagagcctggag
gtggacagcgacacagatgtggagggagaagagctgaatccagatgttccccacctggaa
aaccccaaaacaccccagagtgccccgcagaatccagctgtggtgatggagaccccaaat
ccccatcttaaagggtctcagagcggaggtcagaacctggaggtgggcagtgacacggat
gtggagggtgaggatgtcaatccagatgttcctgacctgaaaaaccccaaaaggccccaa
atcaccccaaaggatccagctgtggtggtggggaccccaaattccgacctcagagggtct
caggttggaggtcggagcgtggaggtggacagcgacacagatgtggaagagctgaatgca
gatgttcctcgcccagaaaaccgcagggcgccccaaagtgccctgaaggatccagctgtg
gtgatggagaccccaaatcctgaccgcaaaggagctcagagcggatgtcagagcctggag
gtggacggcgacacagatgtggaggcagaggagctgaatccagatgttccccacctggaa
aaccccaaaacaccccagagtgccccgcagaatccagctgtggtgatggagaccccaaat
ccccatcttaaagggtctcagagcggaggtcagaacctggaggtggacagtgacacggat
gtggagggtgaggatgtcaatccagatgttcctgacctgaaaaaccccaaaaggccccaa
atcaccccaaaggatccagctgtggtggtggggaccccgaattccgatctcagagggtct
caggttggaggtcagggtgtgaaggtggacagcgacacagatgtggaagagctgaatgca
gatgttcctcacccagaaaaccacagggcgccccaaagtgccctgaaggatccagctgtg
gtgatggagaccccaaatcctgaccgcaaaggagctcagagcggatgtcagagcctggag
gtggacggcgacacagatgtggaggcagaggagctgaatccagatgttccccacctggaa
aaccccaaaacaccccagagtgccccgcagaatccagctgtggtgatggagaccccaaat
ctccaccttaaagggcctcagaggggaggtcagaacctggagatggacagcgacacagat
gtggagagtgaggatgtcaatccagatgttcctgacctgaaaaacccccaaaggccccaa
atcaccccaaaggatccagctgtggtgatggagaccccaaatccccatcttaaagggtgt
caggttggaggtcagagcacagaagtggacagcaacacagatgtgaaggcagaagagttg
aatccagatgttccccacctgaaaaaccccaaaacaccccagagtgccctgcagaatcca
gctgtggtgatggagaccccaaatcctggccttaaaggatcccaggttggagatcggagt
gtggaggtggacagcgacacagacgtggagggtgaggatgtcaatccagatgttccagac
ccaaaagaccccaaaaggccccaaatcaccccgcaggatccagctgtggtggtgaagacc
ccaaacccagacgttgtcggcccgaatggtgacagtgataccgatgaggacctcagtagc
gttggagccccccagacccccaaggcaacgcgtggcgtcaccgattcgggtgctgtggat
gcctctgctccagatgttgctccagatgtggcggtgactgccccaattccagctgttcct
ccccccatgagcctttggggcgacagtgacaccgatggggaggaggaggtggcccccact
ccccacattcagaggttccggagccgaatccgactccgaaatccaaacgtcggcagcacc
gcgatgggcggcggtgccaatgtggggcagacggacccaaaatgtgggaaattgacccca
aaaaggcagagttcgcccccagaacaacgcggtgatggaggtgtgggaggaacggcacca
aaacggcacaactcagccccacatatggacgcggagagccccgaacccaatgatgggacg
cagagacgcagtggggagacctcgaggatgggcggcgatacagctgcggctccagcccca
aaatctccggattcggccccaaatttgggtcgtcccaatgggggcacggatgtgacagag
agcgacaccgaggctgaggatgacccggacctcttcctcgcccccacgcagagcttcctg
ccccccacgcagagcttcctgccacccccgactcaagacccaacccccgcttgggacccc
gaggagcccacgcagtgcttctaccaccccgaggaggaggaggggaaggaggaagagccc
ccccagagccgcatggccacacgtgttgccgcggtgacgccggcccaggaggactcgggg
accattagagcccccagcgaggcggtggcggaggggccgcgccgcagccagcgccagacc
cgcagccgtgggggcggagccagccgggaaggaggcggggctaaggcagcggggggcggg
gcaacagctgaccccgcccccttgcgccgcagtccccgcctcctggctcggtcctcccca
gcggagcccaagagggggcgtggccaagatgagccccgcccaccgcctgcgccccgcccc
cggaggggaggccacgccccctcccagaagaaagcacaggaggaggagccaactgacatc
accagggctcagctccgcccccggggcagctccgcctcctcctcccccaaggtgctgttc
acgggggtggtggcctcccccggcatggaggcggccctgggggcgctgggggggtccatg
gccgcctccgtcttcgactgcacccatctggtgaccgaccgcgtccgccgcaccatcaaa
ttcctgtgcgcggtggcgcgtggcatcgccatcgtcacccccacgtggctccatgagagc
tcccgcagcggccgtatccttccgccgggtcccttcctggtgcgggacagccagcaggag
cagcacttcggcttcagtctgtcccaggccctcagccgggcccgccgccgccctctgctc
cagggctatgagatccacgtcacccccagcgtccgccccgaacctgagcacatgcgggac
atcatcacctgcagtggtggcactttcctgcccaccatgccctgcacttatgggccccgc
agactggtcatctcctgcccagaggattcggggcggtgggggccggcgttgggggctcaa
ctccccctcctctcagctgagctcctcctcaccgggctcctccggcagcagctgcagctc
caacccttccttctcacccccccgggacccccccaggaccccccggtgtcccctcggcgg
ctccgggacagagcacagcgggacccccccggtacccggcggcgcgggcgactcggggtt
aaatga

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