Gallus gallus (chicken): 107049571
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Entry
107049571 CDS
T01006
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gga04515
]
107049571
Cell adhesion molecules [BR:
gga04515
]
Cadherins
Protocadherins
107049571
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
FAM222A
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
107049571
NCBI-ProteinID:
XP_025010698
CGNC:
72587
LinkDB
All DBs
Position
13:complement(788930..791580)
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AA seq
809 aa
AA seq
DB search
MAAARQVLCLWALLGVPRVRCEPIRYSVAEEGESGSVVADVAEDAGLAPAQLSARRARIA
SPAGRQHFRLERGSGRLVVAERLDREEMCGRSRTCTLAFELLLADPLQFFPIEVSVEDIN
DHSPVFPDERVTFKIPERGDPGTRFPVGAAQDLDIGSNDIQAYSIIPENEYFTVFIQSEN
EKFIELVLEKPLDREEQPEMDFTLVATDGGSPPRTGSTEIHITVLDINDNVPVFTQKVYI
GHVLENAPEGSVVLRVVANDADEGVNGDISYQFSQSVVHRHSLFTINPKTGEIGIAKPLD
FETEKKHKLTVQAVDGGGLSSMCNVIVEVLDVNDNAPEIVVSSFNSPLPENVEPGTVIAL
FAVRDQDSGINGEITCALEEQLSFSLRPAFKNYYELVTVSTLDREERAQHMVVVTAADAG
SPPLTSTHTFSVDISDVNDNAPVFNQTSYTMYVHENNAPALLVGAVKATDADAGPNAKVS
YSVVPARGPEEEPCSCVSVNSESGGVFVLRPLDYEQLRQLEVVVSAADAGSPPLSSSVSV
RLLVVDENDNAPLVLHPSAQDSSPPSSELVPAGAEAGDLVSKVVAVDADSGQNSWLSYQL
LRATEPGLFAVGAQSGEVRLRRPPTERDAAKQKLVVLVRDNGRPPLSATAALSVLLVPGS
WDAQLPQQSPAAGEDDGSLTTSLIIALVFVSLLFLLSAAAFVACKVCKRKELSSGPVLYG
ASSVQSYVADGAAAGTLPHAYCYEVSLTTGSGNSEFKFLKPVLPSLPAQHCSTGVGGAHA
EEFPPVPVTMGDADFESPGMQSVAQLNGF
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcaaggcaagtgctgtgtctgtgggctttgctgggcgtgccgcgcgttcgc
tgcgagcccatccgctactccgtggccgaggagggcgagagcggctcggtggtggccgac
gtggcggaggacgcggggctggccccggcgcagctctcggctcgccgggcgcgcatcgcc
tcgccggccggccggcagcactttcgcttggagcgcggcagcggccgcctcgttgtcgcc
gagcggctcgatcgggaggagatgtgcggacgctcccgcacctgcacgctcgccttcgag
ctgctgctcgccgacccgctgcagttctttccgatcgaggtgtccgtggaggacatcaat
gaccactcgccggtcttcccggacgaacgagtgacctttaagatccctgagaggggcgac
ccgggcacacgtttccctgtgggggcggctcaggacctggacattggcagcaatgacatc
caggcttatagcatcattcctgagaacgaatacttcactgtcttcatacagagtgagaat
gagaaatttatagaactggttttggagaagcctctggacagagaggagcagccagaaatg
gatttcactctcgttgccacagatgggggttctccaccccgaactggttcaaccgaaatc
cacatcactgttctggatataaatgacaatgttcccgtcttcacacagaaggtttacatt
ggtcatgttttggaaaatgctccagagggctctgtggtcctcagagtggtggccaacgat
gcagatgagggtgttaatggggacatctcgtatcagttcagccaatcagtagtacacagg
cattcattgttcacgattaaccccaaaacaggcgaaattggcattgcaaagcctttagat
tttgagaccgaaaagaaacataaacttaccgtgcaggcagttgatggtgggggactctca
tccatgtgcaatgtgatagtggaggtgctggatgtgaatgataatgcaccagagatcgtg
gtcagttccttcaacagcccactcccggagaatgtagaacctggaacggtaattgctctc
tttgctgtcagggatcaggattccggtatcaatggggagattacatgtgcccttgaagaa
cagctctccttctccctcaggccagcctttaagaattactacgagctggtgaccgtgagc
acgttggaccgggaggagagagcacagcacatggtggtcgtcacggcagcagatgcaggc
tctcctcctctcaccagcacccacaccttcagcgtggacatctccgatgtcaacgacaac
gcacccgtcttcaaccagacgtcgtacaccatgtacgtgcatgagaacaatgcacctgca
ctgctcgtcggggccgtgaaggcgacggatgcggacgcggggcccaacgccaaggtgagc
tattccgtggtgccagcccgtggcccggaagaagagccctgctcgtgtgtgtccgtgaac
tcggagagcggaggcgtgtttgtgctgcggccgctggactacgagcagctgaggcagctg
gaggtggtggtgagcgctgcagacgcggggtcccctcccctcagcagcagcgtcagcgtc
cgcctgctggtggtggacgagaacgacaacgcgccgctggtgctgcaccccagcgcgcag
gacagcagccctccttccagcgagctggtgcccgccggggccgaggcgggggacctggtg
agcaaagtggtggccgtggacgccgactcgggtcagaactcgtggctttcctaccagctg
ctgagggccacggagccggggctgtttgctgtgggtgcccaaagcggggaggtgcggctg
aggaggccgccgaccgagagggacgctgcgaagcagaagctcgtcgtgctggtgcgggac
aacgggcggccgccgctgtcggccacggcagcgctcagcgtgctcctcgtccccggctcc
tgggacgctcagctgccgcagcagagccctgctgcaggcgaggacgacggctccctcacc
acctctttgatcatcgccttggtctttgtgtcgctcctcttcttgctgtcggcggccgcc
tttgtcgcctgcaaggtgtgcaagaggaaggagctgagtagcgggcccgtgctttacggc
gccagcagcgtgcagagctacgtggctgacggggccgctgccgggaccctgccccacgcc
tattgctacgaggtcagcctcaccacgggctcgggcaacagcgagttcaagttcctgaag
cccgtcctccccagcctgccagcgcagcactgcagcacgggggtgggtggcgcccatgct
gaggagttccctcccgtgcctgtcactatgggggatgctgatttcgagagccccgggatg
cagtctgtggcacaattgaatgggttttaa
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