Gallus gallus (chicken): 107050103
Help
Entry
107050103 CDS
T01006
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X3
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
gga
Gallus gallus (chicken)
Pathway
gga04120
Ubiquitin mediated proteolysis
gga04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107050103
04120 Ubiquitin mediated proteolysis
107050103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gga04121
]
107050103
Enzymes [BR:
gga01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107050103
Ubiquitin system [BR:
gga04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107050103
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-RING_16
U-box_ZFPL1
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
107050103
NCBI-ProteinID:
XP_040512885
CGNC:
73118
LinkDB
All DBs
Position
39:complement(48881..68973)
Genome browser
AA seq
930 aa
AA seq
DB search
MIGTRTFPLFAAQSACLAVTQFKKAAVDLFVLHFADPSGNTLLPGATPEALPAEDNACVI
CREEMGPEVTALPCCHVFHTSCLRSWFRQQWTCPMCRMPVQRVFYPELMPPDPPAQPPDP
PARPQTPPRTSPAPEPQNWDSYEEEEEEEEQRQPLGRTLNQEMIWVYQECFTRLEDENMA
AWLLRCYDSGAKGVNLEGRQLRRLGSLSNEPALDRLICRREDSSFTLWKRMLSAVRQRYR
NRKYVTPRASPWFTLDEGIQRLRQLAVVEMLYADSFDPDDPRADDCPDTTKCTPQMWWQL
AVSAPSDLVATMTAVQCMYHNPASVMMLTCALQDYDRNVASIQRRCVTLLEELAREVQKL
SREVEQCGRAATMLCTAVVMLGSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYI
QAFVLVFLLGKFMGKVFFGQLRAAEMEHLMERSWYAVTETCLAFTVFRDDFSPRFVALFT
LLLFLKCFHWLADDRVDFMERSPNISWLFHFRIISLMFLLAILDFLFVSHAYHSILTRGA
SVQLVFGFEYAILMTMVLTIFIKYVLHSIDLQNDNPWDSKAVYMLYTELFTGFIKVILYM
AFMTIMIKVHTFPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQSTD
NVCIICREEMVTGAKRLPCNHIFHTRLPCVCPPPQLPALVVPAAADVPHVPHGRPAGLSA
PAAAPRSRRAEPGAASEPPGGSAPKLPTGDAPPVPPRDVPAVAARGSVPPHPRRSGTPQP
REPHSSSSRLQGRGWHRFGVGGHCSAGLRSAPPVAGNAVAAHFWAPPDAGPPPGLCGADP
GGAAGHGRPRAAAFGGAAAVPAQHPHAAGRRHAADQPIPHRHGRHRLPPSHRPPPLPGPP
HRRRRSAPTAQLFASPRCVKPPLPVTNNPP
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgattgggacccgcaccttccccctcttcgccgcccagtccgcatgcctggctgtgacg
cagttcaagaaggcagcagtggatctcttcgtgttgcattttgctgaccccagtgggaac
acgctcctccccggtgccaccccggaggcgctgcccgccgaggacaacgcctgcgtcatc
tgccgagaggagatggggccggaggtgacggccctgccctgctgccacgtcttccacacc
agctgcctgcggtcgtggttccggcagcagtggacgtgtcccatgtgtcggatgcccgtc
caacgcgtgttctaccccgagctgatgccccccgaccccccggcgcagccccccgacccc
ccggcccggccccagacgccaccgcggacctctccggctcctgagccccaaaactgggat
tcctatgaggaagaggaggaagaagaggagcagcggcagccgttgggccgaactctgaac
caggaaatgatctgggtctaccaggagtgtttcacccgcctggaggatgagaacatggcc
gcgtggctgctgcgctgctacgacagcggggccaaaggcgtcaacttggagggcaggcag
ctccgccgcttgggatccctctccaacgagccggccttggacaggctgatctgcaggagg
gaagacagcagcttcaccctctggaaacgaatgctgagcgccgtcaggcagcgctatcgc
aaccggaagtacgtaacgccgcgcgcctccccctggttcactctggacgagggcatccaa
cgcctccgccagctggccgtggtggagatgctgtacgccgactccttcgaccccgacgac
cctcgggccgacgactgccccgacaccaccaaatgcaccccgcagatgtggtggcagctg
gccgtgagcgcgccgtccgacttggtggccacgatgacggccgtgcagtgcatgtaccac
aacccggcctcggtgatgatgctgacctgtgccctgcaggactacgacaggaacgtggcg
tccatccagcgccgctgcgtcaccctgctggaggaattggccagagaagtgcaaaagctg
tcccgggaggtcgagcagtgcggccgtgccgcgaccatgctgtgcacggcggtggtgatg
ctgggcagtttggctctgaccacggccgtggtggcccacgcctattacctgaagcaccag
ttctaccccaccgtggtgtacctcaccaaatccagccccagcatggccgttctgtacatc
caggccttcgtgttggtgttcctgctggggaagttcatgggcaaggtgttctttgggcag
ctgcgtgcagctgagatggagcacctgatggagcgctcctggtacgccgtcaccgagacc
tgcttggccttcaccgtcttccgtgacgacttcagcccccgtttcgtggccctcttcacc
ctcctcctcttcctcaaatgcttccattggttggccgacgaccgcgtggactttatggag
aggagccccaacatctcctggctcttccatttccgcatcatctccctcatgttcctgctg
gccatcctggatttcctctttgtcagccacgcctatcacagcatcctcacccgcggcgcc
tccgtccagctggtctttggctttgagtacgccatcctcatgaccatggtgctcaccatc
ttcatcaagtacgtgctgcactccatcgacctgcagaacgacaacccctgggacagcaag
gccgtctacatgctgtacacggagctcttcaccgggttcatcaaagtcatcctctacatg
gccttcatgaccatcatgattaaggtgcacaccttccccctcttcgccatccgccccatg
tacctggccatgaggcagttcaagaaggcggtgacggacgccatcatgtcgcgccgcgcc
atccgcaacatgaacacgctttaccccgacgccaccccggaggagctgcagtccacggac
aacgtctgcatcatctgccgcgaggaaatggtgacgggggccaaacgcctgccctgcaac
cacatcttccacaccaggcttccctgtgtgtgtccccccccccagctgcctgcgctcgtg
gttccagcggcagcagacgtgccccacgtgccgcatggacgtcctgcgggcctctctgcc
cccgcagccgccccccgaagccgcagagcagaacccggcgccgcctcagagccccccggg
ggctcagccccaaaacttcccacaggggatgctccccccgttcccccccgggatgttccc
gctgtggccgcccgtggctccgttcccccccatccccggcgctcagggaccccccaaccc
cgagagccccacagcagctccagccgcctccagggccggggatggcaccgcttcggggtc
ggagggcactgcagcgccgggcttcgctctgccccccccgtggctgggaatgccgtggcc
gcccatttttgggctccccccgatgccggtcccccccccgggctttgcggggctgacccc
ggaggagctgcaggccatggaaggccacgagcggcagcatttggaggcgcggctgcagtg
cctgcacaacatccacacgctgctggacgccgccatgctgcagatcaaccaatacctcac
cgtcatggccgccatcggctccccccgtcccaccgccccccccccctcccaggacccccc
caccgccgccgccgcagcgcccccacagcgcagctcttcgcctccccccggtgcgtcaaa
ccccccctccccgtcaccaataaccccccctaa
DBGET
integrated database retrieval system
