Gallus gallus (chicken): 107053153
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Entry
107053153 CDS
T01006
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X2
KO
K10653
tripartite motif-containing protein 54
Organism
gga
Gallus gallus (chicken)
Pathway
gga04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107053153 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gga04121
]
107053153 (TRIM54)
Ubiquitin system [BR:
gga04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107053153 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_5
zf-B_box
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
CYP38_PsbQ-like
RHH_9
Prok-RING_4
DUF5799
DUF1670
Zn_ribbon_FGT1_2
UvrD_C
CagA
FlgN
Motif
Other DBs
NCBI-GeneID:
107053153
NCBI-ProteinID:
XP_015140486
CGNC:
80658
Ensembl:
ENSGALG00000033203
LinkDB
All DBs
Position
3:complement(104508106..104511514)
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AA seq
377 aa
AA seq
DB search
MNFAVGLKPLLAEARSMESLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSGAGPSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESARPLHAKA
EQQLMCEEHEDERINIYCLRCEAPTCSLCKVFGAHKDCEVAPLPAVYQRQKSELSDGIAM
LVAGNDRIQAIITQMEEICRTIEENGRQQKQHVGLRFDSLCSILEERKKELLQSIAREQE
AKVQRVRGLIRQYGDHLEASSKLVETAIQAMEEPQMAVYLQHSKELLKKITDMSKVSMSS
RPEPGYESMDHFSINVDHVAEMLRTIDFQPEALGEDDGDGPTDSSEGVGDEESLEAPEAA
EDVGPRQKPLSSPHGQH
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgcggtggggctgaagccgctgctggcggaagcgcggagcatggagagcttg
gagaaacagctcatctgccccatctgcctggagatgttcaccaaacccgtggtcatcctg
ccctgccagcacaacctctgccgcaagtgcgccaacgacgtcttccaggcctccaacccg
ctgtggcagtcgcggggttccggcgcggggccgtccggggggcggttccggtgcccgtcg
tgccgccacgaggtggtgctggaccggcacggggtgtacgggctgcagcggaacctgctg
gtggagaacatcatcgacatctacaagcaggaatcggcgcgccccctgcacgccaaggcg
gagcagcagctgatgtgcgaggagcacgaggacgagcgcatcaacatctactgcctgcgc
tgcgaggcgcccacctgctccctctgcaaggtgttcggcgctcacaaggactgcgaggtc
gccccgctgcccgccgtgtaccagcgccaaaagagcgagctgagcgacggcatcgccatg
ctggtggcgggcaacgaccgcatccaggccatcatcacgcagatggaggagatctgccgc
accatcgaggagaacggccgccagcagaagcagcacgtggggctgcgcttcgactcgctc
tgcagcatcctggaggagcgcaagaaggagctgctgcagagcatcgcccgcgagcaggag
gccaaggtgcagcgcgtgcgcggcctcatccggcagtacggggaccacctggaggcctcc
tccaagctggtggagacggccatccaggccatggaggagccccagatggccgtgtacctg
cagcactccaaggagctcctgaagaagatcacagacatgtccaaggtgtcgatgagcagc
cgccctgagcccggctatgagagcatggaccacttctccatcaatgtggaccacgttgct
gagatgctgcgcaccatcgacttccagccagaagcgctgggtgaggacgatggggacgga
cccacagacagcagtgagggtgtgggggatgaggagagcctggaggcacccgaggctgct
gaggatgtggggccaaggcagaagccattgagctctccccatggtcagcactga
DBGET
integrated database retrieval system
