Gallus gallus (chicken): 107054462
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Entry
107054462 CDS
T01006
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-15
KO
K16494
protocadherin beta
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gga04515
]
107054462
Cell adhesion molecules [BR:
gga04515
]
Cadherins
Protocadherins
107054462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
107054462
NCBI-ProteinID:
XP_015148986
CGNC:
77438
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All DBs
Position
13:complement(993735..997772)
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AA seq
786 aa
AA seq
DB search
MARDSLVGNVAQDLGLSPSQLAARKARVVSEGSEQHFRLDPHSGVLTVTETLDRERICPH
SESCALLFKLFFENPVQLIRGEVEVRDVNDHSPVFSKKETILEILETASPGTRFPLQRAR
DKDVGXNGLQNYSLSPNSHFSLAPEKGQDGDKYAELVLQRPLDREEQRELHLVLTATDGG
SPPRSGTAQVRVVVLDANDNMPVFSREVYEVRVAENSPPGQLVVRVSAADPDEGSNGKVR
YEFTEMSDHPSLFDLNAATGEIRVSGRLXFRGYESHKLVVRATDGGGLSAHCRVHVEVLD
VNDNAPEIALSSVSASIPEDAPPRTVVALLSVRDRDSGDNGRTECAIEGDVPFSLTAAFA
NHYELRTSAALDRETTAEYNVSIVATDWGRARLSARESVSVRIADVNDNAPRFTQAAYSM
SVSENEAGAVRIGSVKATDADAGANGRVRYALVREEGEERPAVSVDAESGAVSVVRPLDY
EEVRAVEVTVRAADGGSPPRSATALLRVLVRDENDNAPVVLHPPADGGAALGELVPRRAR
AGYLVAKVVAVDADAGQNAWLCYELAKATEPGLFRVGLHSGEVRTARAVGERDAARHRLV
VLVRDRGRPPRSASATLAVALADGFSEGHLRASEEAPAAEPDGRLTLYLSVCLACVSALF
VAGAAAAVAAKVRRARRGEPGTLPTFPQSAADSSAGSLPRSYVYDVRLAAGTVNSEFRFL
GPLLPCFPAGLPQGAAEQRSSLCSAGLGQEEGDWAVQGRAPLSEGTAPGAAEENASLDQS
PWLSHQ
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggcgagggactcgttggtgggcaacgtcgcccaggacctggggctttctccgagccag
ctcgcggctcgcaaggcgcgcgtggtgtccgaggggagcgagcagcatttccgcctcgat
ccgcacagcggcgtcctgacggtcacggagacgctggaccgagagcggatctgtccgcac
agcgagagctgcgcgctcttgtttaagcttttctttgagaacccggtgcagctgatccgc
ggggaggtggaggttcgggacgtgaacgaccactcccccgtgttctccaagaaagagaca
attctagagattcttgaaacggcatctcctgggactcggttcccactgcaaagagcgcgg
gataaggacgtggggnataacggtttacagaattacagcctctccccaaactcgcatttc
tcccttgctcccgagaaaggacaggatggagataaatacgcggagctcgtcctgcagagg
cctttggaccgcgaggagcagcgggagctgcatttggtgctcacggccacggacgggggc
tcgccgcccaggtcgggcacggctcaggtccgggtggtggtgctggatgccaacgacaac
atgccggtgttctcgcgggaggtgtacgaggtgcgcgtggccgagaacagccccccgggg
cagctggtggtccgggtgtcggccgcggatcccgacgaaggctccaacggcaaagtgcgg
tacgagttcactgagatgtccgaccatccgtcactcttcgacctgaacgcagccaccgga
gagatccgggtctcgggaaggttgnnatttcgaggatacgaaagccacaagctggtagtg
agagccactgacgggggtggtctgtctgcgcactgcagagtgcacgtggaggtgctggac
gtgaacgacaacgcgccggagatcgcgctgagctccgtgagcgcctccatccccgaggac
gccccgccccgcaccgtggtggccctgctgagcgtgcgggaccgcgactccggcgacaac
gggcggacggagtgcgccatcgagggcgacgtgccgttcagcctgacggccgctttcgcc
aaccactacgagctgcgcaccagcgcggccctggacagggagacgacggccgagtacaac
gtgagcatcgtggccacggactggggccgggcgcggctgagcgctcgcgaaagcgtgtcg
gtgcgcatcgccgacgtgaacgacaacgcgccgcgcttcacgcaggcggcgtacagcatg
tcggtgagcgagaacgaggcgggcgcggtgcggatcggcagcgtgaaggcgacggacgcg
gacgcgggcgcgaacgggcgcgtgaggtacgcgctggtgcgggaggagggcgaggagcgg
cccgccgtgtcggtggacgccgagagcggggccgtgtccgtcgtgcggccgctggactac
gaggaggtgcgcgccgtggaggtgacggtgcgcgccgccgacgggggctcgccgccgcgg
agcgccacggcgctgctgcgggtgctggtgcgggacgagaacgacaacgcgcccgtggtg
ctgcacccgccggccgacggcggcgcggcgctgggcgagctggtgccgcggcgggcgcgg
gcgggctacctggtggccaaggtggtggcggtggacgcggacgcggggcagaacgcgtgg
ctgtgctacgagctggccaaggcgacggagccggggctgttccgcgtggggctgcacagc
ggcgaggtgcgcacggcgcgggccgtgggcgagcgcgacgcggcccggcacaggctggtg
gtgctggtgcgggaccgcgggcggccgccgcgctccgccagcgccaccctcgccgtcgcc
ctggccgacggcttctcggaaggccacctgcgggcgagcgaagaggcgccggccgccgag
cccgacggccgcctcaccctctacctcagcgtctgcttggcctgcgtgtccgcgctcttc
gtggccggcgcggcggccgccgtggccgccaaggtgcggcgggcccggcggggcgagccg
gggaccttgcccaccttcccgcagtccgccgccgacagcagcgccggctccctgccccgc
agctacgtctacgacgtccgcctcgccgccggcaccgtcaacagcgagttccgcttcctc
gggccgctcttgccctgcttccccgccgggctgccgcagggcgcggccgagcagcggagc
tcgctctgctcggccggcctcgggcaagaagaaggcgactgggctgtgcagggccgagct
cccctctctgaaggcacggctcccggggcagcagaggagaatgccagtttggatcaaagc
ccctggctcagccatcagtaa
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