Gallus gallus (chicken): 373945
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Entry
373945 CDS
T01006
Symbol
ABCA1
Name
(RefSeq) ATP-binding cassette sub-family A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
gga
Gallus gallus (chicken)
Pathway
gga02010
ABC transporters
gga04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
373945 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
373945 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gga02000
]
373945 (ABCA1)
Transporters [BR:
gga02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
373945 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
373945
NCBI-ProteinID:
NP_989476
CGNC:
11502
Ensembl:
ENSGALG00000015433
UniProt:
Q8UVV4
LinkDB
All DBs
Position
Z:complement(54811100..54902448)
Genome browser
AA seq
2260 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDAKRLLLYSQQDT
SIKDVQKVLAKLRKLGNSSGLDLKLRDFLVDNETFSDFLRHNVSMPSSAVEELLDAEVNL
QKVIVSGYRIQLRDLCNSSALSEFLTIQNRSVAMDSEAFLCTLPKETLHAAELAFRANLN
PLKPLQREIFFNSSLRDLSETVEALRDSLGKLVKELLSMKSWSDMRQEVMFLTNVNASNS
STQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDVTNFYDNSTTPYCN
ELMKNLESSPLSRIIWRALKPLLIGKVLYTPDTPAIRKIMAEVNRTFQELGVFRDLGGMW
EEISPKIWTFMESSQEMDLIRTLLKSKALWDLHLPASNWTVEDVARFLSKHPEEFEADNG
MVYTWVDAFNETDRAIQTISRFMECVNLDKLEPVATEVRLINKSLELLDERRFWAGVVFT
EIAPNSTELPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFTYLQDV
VEQAIIRVQTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGI
VYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLMSAGLLVLILKMGNLLPYSDPSVVF
VFLSIFGIVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDYVSFSLKIFA
SLLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGVMT
WYIESVFPGQYGIPRPWYFPFTKSYWFGEESQDRQHLHPDQKGPSEVCKEEEPMHLSLGV
SIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFI
LGKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMAMDV
GLPHKLKARTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLS
SCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVEDI
GHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAE
TSDGTLPARRNRRAFGDRQSCLRPFTEDDAFDPNDSDIDPESRETDLLSGMDGKGSYQMK
GWKLSQQQFMALLWKRLLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLELQ
PWMYDEQYTFISNDAPEDAGTQKLLDALLNKPGFGTRCMQGHSIPDTPCTVGQKEWTTAS
VPDSVLEILRGNWSMENPSPSCECSNEKIKKMLPVCPPGAGGLPPPQREQDTADILQNLT
GRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARSSHVLPPSNEVTDAIKQVKKI
LELAQGSSGDRFLNNLASFMKGLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANLQQG
KNPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERV
SKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVIIIFICFQQKSYVSSSNLPVLALL
LLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNIND
ILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEGV
VFFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVNRERQRIISGGGQSDILEIRELTKIY
RMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGDAFLKGNSILSNI
QEVHQNMGYCPQFDAVNELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGEKY
AGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVLTS
HSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGGNPDLKPVEEFFGH
AFPGSVLKEKHRNMLQYQLPSSQSSLARIFSVLSQNKKRLHIEDYSVSQTTLDQVFVNFA
KDQSDDDHTKDLSLHKNQTVVDIAILNSFLQDEKVKESCV
NT seq
6783 nt
NT seq
+upstream
nt +downstream
nt
atggcattttggacgcagctgggattgctgctatggaagaacttcacctacagaagaaga
cagactttccagctgctgatcgaagttgcttggcctctgtttatcttcttcatcctgatc
tctgtaagactttcatatccgccctacgaacagcatgaatgtcacttcccaaacaaagct
atgccctcagcaggaacattgccctggatacaggggatcatctgcaatgccaacaaccct
tgtttccgctacccaacaccaggggaatctcctggtattgttggaaacttcaatgcgtcc
atagtttcccgcctcttttcagatgccaagaggttactcttgtacagccaacaggacaca
agcataaaggatgtccagaaggtcttggcaaaactgcggaaactgggaaactcctctggc
ttagacttgaaacttcgggatttcctggttgacaacgagacattctcagactttctccgt
cataatgtgtccatgccatcttcagcagtagaggagctactggatgcggaggtcaatctc
cagaaggtcatagtgtctggttaccgaatacaactacgagatctctgcaatagctcagca
ctgtctgaatttcttacaatccaaaatcgctcagtggccatggactctgaagccttcctt
tgcaccttaccaaaggaaacactccatgcagccgagctagccttccgtgctaacctgaat
cctttaaagccgcttcagagagaaattttctttaattcctccttgcgggatctgtcagaa
actgtggaggctttgagggacagcctgggaaagcttgtcaaggagctgctgagcatgaag
agttggagtgacatgaggcaagaggtgatgttcctgaccaatgtgaatgcctcaaactcc
tctacacagatctaccaggctgtgtcacgcattgtgtgtggccaccctgaaggtggaggg
ctcaagattaaatccctcaactggtatgaggacaataattacaaagcactgtttggaggc
aacagcactgaagatgatgtaactaatttctatgataactccacaacaccctattgcaat
gagctgatgaagaacctggaatccagcccactttccagaattatttggagggctttgaaa
cctttgctgattgggaaggtcttgtacactccagacacaccagccataaggaagatcatg
gctgaggtgaacaggacattccaggagctgggagtgtttcgcgaccttggggggatgtgg
gaggagataagcccaaagatctggacgttcatggaaagtagtcaggaaatggatctgatt
cggacgctgctgaaaagcaaggctctctgggacctacacttgccggcttccaactggacg
gtggaagacgttgcccgtttcctgtcaaagcatccagaagagtttgaggcagataacgga
atggtctacacctgggtggatgccttcaatgagacggatagagctattcagaccatatcc
cgcttcatggagtgtgtcaacttggacaaactggagcctgtggccacagaagtccgtctt
ataaataagtccttggagcttctggatgaaaggagattctgggctggtgttgtcttcact
gaaatagctcctaacagcacagagctccctcagcatgtgaaatacaaaatacgcatggac
attgacaatgtggaaaggaccaacaagattaaggatgggtactgggatcctggtccccgt
gctgacccctttgaggacatgcgctatgtgtggggaggttttacctacttgcaggatgtg
gtagaacaggccatcatcagagtgcaaacaggcacagaaaagaagacaggagtttatgtg
cagcagatgccttatccgtgttatgtggatgacatatttctgcgtgtcatgagccgttcc
atgcctctcttcatgactctagcctggatctactcagtggctgtgataattaagggcatt
gtgtatgagaaggaagcccggctgaaggaaacaatgaggattatgggccttgacaatggc
atcctttggctaagctggttcattagcagcctcatccctctcctcatgagtgcaggtctg
ctggtgctgatcctcaagatggggaatctgctgccttacagtgaccctagtgtggtgttc
gttttcctctcaatctttggcattgtgaccatcctgcagtgctttctcatcagcaccgtg
ttctccagggccaacctggcagctgcctgtggaggcattgtgtatttcactctataccta
ccctacgtgctgtgtgttgcctggcaggactatgtcagcttctcgctcaagatctttgcg
agcctgttatctccagtagcctttggctttggttgcgagtactttgcactgtttgaagag
cagggagttggtgttcagtgggacaacttctttgagagcccactagaagaagatggcttt
agcatcaccacatctgctgtaatgatgttgtttgacacgttcctctatggggtcatgacc
tggtacattgagtctgtcttcccaggccagtatgggattcccagaccctggtactttcct
ttcacaaaatcctattggtttggtgaagaatctcaggacaggcagcatcttcatcctgac
cagaaggggccctcagaagtctgcaaggaggaagagcctatgcatctgagtcttggtgtc
tccatccagaacctggtgaaggtttatcgtgatggcaagaaagttgctgtggatggtctc
acactgaatttctatgaagggcagatcacatcatttctgggacataacggagcagggaaa
accactaccatgtccatcttgactggcttattccctcctacttctggtactgccttcatc
ctgggtaaagatatccgctcagagctcagcaccatcaggcaaaacttgggtgtctgtcca
caacacaacgtgctgtttgatttgctgactgtggaagagcacatctggttctatgctcgg
ctcaaagggttgccggaaaagaaggtaaaagaggaaatggagcagatggcaatggacgtt
ggtttgcctcacaaactgaaagccaggacaagcaaactctctggtggcatgcagaggaag
ctctcagttgccttagcctttgttggtggctccaaagttgtcattctggatgagcccaca
gctggagtggatccttattctcggagagggatatgggaactgcttctgaagtacagacaa
ggccgcactatcattctttccacacaccacatggatgaggcagacattctgggggatcga
attgccatcatttctcatggcaagctctgctgtgttggttcttctcttttcctgaagaac
cagctgggaacaggctattacttgacccttgtcaagaaagatgtggattcctctctgagc
tcctgtcgaaacagtagcagcacggtgtcctatctgaagaaggatgacagtgtctcccag
agcagctctgatgctggccttggcagtgaccatgaaagtgacaccctgacaatagatgtc
tctgcaatttcgaatctcattacaaaacacgtccctgaggcaagactggttgaggacatt
ggtcatgagttaacctatgtcttgccatacaaagctgctaaagagggagctttcgtcgag
ctgttccatgaaattgatgatcgcctttctgatcttggcatttccagctatggcatttct
gagaccaccttggaggagatcttcctcaaagtggctgatgatagcggtgtggatgcagaa
acctcagatgggacattgcctgccagaaggaacaggcgtgcatttggagacagacagagc
tgccttcgtccatttacagaagatgatgcatttgaccctaatgattcagacattgatcca
gaatccagagagactgatcttctcagtggcatggatgggaaaggctcctaccagatgaag
ggctggaagctctcccagcaacagttcatggctctgttgtggaagagactgcttattgcc
aagagaagccggaagggcttctttgctcagattgtgctgccagctgtctttgtgtgtatt
gctctcatgttcagtctgattgttcctccctttgggaagtatcccagcctggaattacag
ccctggatgtacgatgagcagtatacatttattagtaatgatgctccagaagatgcaggc
actcagaagcttttggatgcccttctcaataaacctggctttggaacacgctgtatgcag
ggacactccatcccagacactccttgcaccgtgggacagaaggaatggaccactgcttca
gtcccagactcagtcctggaaatcttgagaggcaactggagcatggagaacccttctcca
tcttgtgagtgcagcaatgagaagatcaagaagatgctgcctgtgtgtccccctggtgca
ggcgggctgccacccccacagcgagaacaagacactgctgacatcctccagaatctgacg
ggtcgcaatatatcagactatctagtgaagacctacgcgcagatcattgggaaaagctta
aagaataaaatctgggtgaatgagttcaggtatggaggcttttccttgggagccagaagt
tcccatgtgcttcctccaagcaatgaagtcactgatgccattaaacaggtgaagaagatc
ttggagctagcacaggggagttctggagataggtttctcaacaacttggcaagtttcatg
aaaggtctggacacaaagaacaacgtgaaggtgtggttcaacaacaagggttggcatgcc
attgcctccttcctgaatgtgatcaacaatgctattcttcgggccaacctgcagcagggc
aagaaccctagtgcttatgggatcaccgccttcaatcacccgctcaacttgactaagcag
cagctctccgaagtggctctgatgaccacatcagtggatgtcctggtctccatctgtgtg
atctttgccatgtcctttgttcctgccagctttgtggtgttccttatccaggaacgtgtc
agtaaggctaagcacttgcagttcatcagtggtgtgaagcctgtgatctactggctggcc
aactttgtctgggatatgtgcaactacatcgttccagccacactcgtcatcatcatcttc
atctgcttccaacagaagtcctatgtatcctcctccaacttgcctgtgctcgctcttctt
ctgcttctctatggttggtctatcactcctctcatgtatccagcctccttcgtgttcaaa
atccccagcacagcatatgttgtgctgaccagtgtgaacctcttcattggcatcaatggt
agtgtggccacctttgtcctggagctcttcaccaacaacaagctgaacaacatcaatgac
atcttgaagtctgtctttcttatcttccctcacttctgcctggggcggggtcttattgac
atggtgaaaaatcaggccatggctgatgctctggagaggtttggtgagaatcgttttgtg
tcccctctgtcatgggacctggtgggaaggaacctgtttgccatggcagtggagggtgtg
gtcttcttcctcattactgtgctcatccagtacagattcttcatcaaacccaggcctgtc
tatgccaagttacctcctgtgaatgatgaagatgaagacgtaaacagagaaaggcagaga
ataataagcggaggaggacagagtgacatactagaaatcagggagctgaccaagatttat
agaatgaaacgaaagccagcagttgacaggatatgtgttggaatccctcctggagagtgt
tttggacttctgggagtaaatggtgctggcaagtcatccactttcaagatgctaactggt
gatacagatgtgacaggaggagatgcttttctcaaaggaaacagtatcctgtcgaacatc
caagaagtccatcagaacatgggctactgtccgcagtttgatgctgttaatgaactgctg
acagggcgagaacacttggagttctttgcactcctcagaggtgttcccgagaaagaagtt
tgcaaggttggtgaatgggcaattcgtaaactgggccttgtgaaatatggagaaaaatat
gcaggcaactacagcggagggaacaggcgcaagctctccacagcaatagccctcattgga
gggccacctgtggtattcctggatgagccaacaacagggatggaccccaaagcacgccgt
ttcttgtggaactgtgctctgagtgttatcaaagaggggagatcagtcgtgcttacatct
cacagcatggaagagtgtgaagcgctgtgcactcgaatggcgataatggtgaatgggcga
ttcaggtgtctgggcagcgtccagcacctaaagaacagatttggagatggttataccata
gtggtgcgaattgcagggggtaacccagacctgaagccagttgaggaattctttgggcat
gccttccctggaagtgtcctgaaggagaagcatcgtaatatgctgcagtaccaacttccg
tcttcgcagtcttcgctggccagaatattcagtgttctctcccagaacaaaaagagactc
cacatagaagactactccgtttctcagaccacacttgaccaagtatttgtgaattttgct
aaggaccaaagtgacgacgaccacactaaggacctgtcattgcacaaaaaccagactgtg
gtagacattgcaatccttaattcctttctgcaagatgagaaggtaaaagaaagttgcgtg
tga
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integrated database retrieval system
