Gallus gallus (chicken): 374195
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Entry
374195 CDS
T01006
Symbol
CHDB1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gga03021
]
374195 (CHDB1)
03036 Chromosome and associated proteins [BR:
gga03036
]
374195 (CHDB1)
Transcription machinery [BR:
gga03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
374195 (CHDB1)
Chromosome and associated proteins [BR:
gga03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
374195 (CHDB1)
SLIK complex
374195 (CHDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
DEAD
CHDCT2
Motif
Other DBs
NCBI-GeneID:
374195
NCBI-ProteinID:
XP_015155946
CGNC:
49078
Ensembl:
ENSGALG00000031327
UniProt:
A0A8V0YMN8
LinkDB
All DBs
Position
W:complement(4989932..5105612)
Genome browser
AA seq
1777 aa
AA seq
DB search
MNGPSDEESIRNSSGESSQSDDDSGSTSASGSGSSSGSGSDGSSSQSGSSDSESASESGS
QSELESDASREKKQVQAKPPKVDGSERSVALKKQQQQMTSSSGSGSEEDLLSSEDSTDGS
SSETKKKKRRDEDWQVSRSGSISGTSSDSESEEDREKNSCEESESDYEPKNKVKSQKPPR
RIKPKSCKKGTGQKKRQFDSSDGDDDYDKRGSRRQATVNVSYKEAEETKTDSDELLEVCG
EDVPQPEEDEFETIEKFMDSRIGRKGATGAATTIYAIEADGDPNTGFEKSKEPGEIQYLI
KWKGWSHIHNTWESEETLKQQNVKGMKKLDNYKKKCQETKRWLKNASPEDVEYYNCQQEF
TDDLHKQYQVVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALIAKKFQACIDEY
FSRNQSKTTPFKDCKILKQRPRFVALKKQPSYIGGRDCLELRDYQLNGLNWLAHSWCKGN
SCILADEMGLGKTIQTISFLNYLFHEHELYGPFLLVVPLSTLTSWQREIQTWAPQMNAVV
YLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGGLNWVFIGIDEAHRLK
NDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGRE
FGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKG
SKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRL
RERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCF
LLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEE
DILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFGAEELFKEP
EGEEEEPQEMDIDEILKRAETRENESGPLTVGDELLSQFKVANFSNMDEDDIELEPEQNL
RNWEEIIPEVQWRRIEEEERQKELEEIYMLPRMRNCAKQISFNGNEGRCSRSRRYSGSDS
DSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDAELVDK
SETDLRRLGELVHNGCIKALNDNDFGQGRTGGRFGKVKGPTFRIAGVQVNAKLVISHEEE
LAPLHKSIPSDPEERKRYVIPYHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDP
DLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKEAQRLAGAGNSKRRKTRSKK
NKATKAAKIKEIKNDSSSPPSEKSDDDNEDEIVSVKHPHKKIKAEKENEEKDEPDIGIKK
EAGEKRETKEKENKRDLKREKKEKEDKKELKYIKEKRENKVKEFIQKVKEVKEEKVNEIK
SEYKEKNKKVPLLDIPVHITAISEPVPISDESEELDQKTFSVCKERMRPVKAALKQLDRP
EKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVSKFTEFDARKLH
KLYKHAIKKRQESQQHSDQNIAANVNTQVIRNPNVESLKENTNHDDSIRDSYSSDRHLCQ
YHDHHKDRYQGDTYKKSDSRKRPYSDFSNGKDHRDWDHYKDSRYCSDSKHRKLDGHRSRD
HKSNLEGSLKDSRPHSDHRSHSDHRIHSDHRSTSEYSHHKSSRDYRYHSDWQMDHRASGS
GSRSPLDQRSPYGSRSPFEHSSDHKSTPEHTWSGWKT
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcccagtgatgaagaaagtataagaaacagcagtggagagtcaagccaatca
gatgatgattctgggtcaacatctgcttctggatctggttcaagctctggaagcggtagt
gatggaagtagcagtcagtcaggtagcagtgactctgagtctgcttcagagtcaggcagt
caatcagaactggagtctgatgcgtctagagagaagaaacaagttcaagctaaaccacca
aaagttgatggatctgagagatcggtagcactcaagaagcaacaacagcaaatgacatct
tcatcaggcagtggttctgaagaggatttattgagcagtgaagattctacagatggctca
tccagtgaaaccaagaagaaaaaacgtagagatgaagactggcaagtatctaggtcaggg
tcaatatcgggaactagttctgattctgaatccgaggaagatagagagaaaaacagttgt
gaagagagtgaatctgactatgaaccaaaaaacaaggtcaaaagccagaaacctccaagg
agaattaagcccaaaagttgcaagaagggcacaggacagaaaaagaggcagtttgattca
tcagacggtgatgatgattatgacaagagaggatctcgtcgccaggcaacagtcaatgtt
agttacaaagaagctgaagaaaccaagacagattctgatgagttgttggaagtttgtgga
gaagatgtcccacagcctgaagaagatgaatttgaaactatagagaagttcatggatagt
cgaattggccgaaaaggagccactggtgctgcaaccaccatctatgcaattgaggcagat
ggtgacccaaatactggatttgaaaagtcaaaagagccaggagaaatacagtatcttatt
aaatggaaaggctggtcacacattcataatacttgggaaagtgaagaaactctgaagcaa
caaaacgttaaaggaatgaagaaactagacaattataagaaaaagtgtcaggaaacaaaa
cgatggctgaaaaatgcttctccagaagatgtggaatactataactgccaacaggaattt
acagatgatctacataaacagtatcaagtagtggaaaggataattgctcattcaaatcag
aaatcagcagctggttatccagattactattgcaaatggcagggtctgccttactcagaa
tgtagctgggaagatggtgctctcattgccaaaaaatttcaggcatgtattgatgagtat
tttagcagaaatcagtccaagaccactccatttaaggactgcaagattctaaaacagagg
ccaaggtttgttgcgttaaagaagcaaccatcttatattggaggacgcgattgtttagag
ttaagagattatcagttaaatggactgaactggcttgctcattcatggtgcaaagggaat
agttgtattcttgcagatgaaatgggtctgggtaaaacaatacaaacaatttcttttctg
aactacctgttccatgaacatgaactgtatgggcctttcttgctggttgtgccactttct
accttgacatcttggcaaagagagattcaaacttgggctcctcagatgaatgctgtggtt
tacttaggagatataactagtagaaatatgataagaactcatgaatggatgcatccacag
accaagcgattaaaatttaatatacttctaacaacttatgaaatcttgctgaaggataag
tcattccttggtggtctgaattgggtgtttatagggattgatgaagctcatcgtttaaaa
aatgatgattctcttctgtacaagactttaatagacttcaagtctaatcatcgtcttctt
attactggaaccccgctgcagaactccctcaaagagctttggtctttgctgcacttcatc
atgccagagaagttttcttcctgggaagattttgaagaggagcatgggaaagggagagag
tttggttatgcaagtcttcacaaagaacttgagccatttctactcagaagagttaaaaag
gatgtagaaaagtctttacctgctaaggttgagcaaattttaaggatggaaatgagtgca
ttgcagaagcaatattacaagtggattttaaccaggaattataaagccctgagcaaaggt
tctaaaggcagtacctcaggatttttgaacatcatgatggaactgaagaagtgttgtaac
cattgttacctcattaaaccaccagatgataatgaattctataataaacaggaggcttta
cagcatttaatacgtagcagtgggaaactaatcctccttgacaagttactgattcgtcta
cgagaacgtggcaacagagtactgattttctctcagatggtgaggatgctagacatccta
gcagaatacttgaagtatcgtcagtttccttttcagagacttgatggatcaataaaagga
gaactgaggaaacaagcactggatcatttcaatgcagaaggatcagaggatttctgcttt
ttgctgtctaccagagctggaggattaggtataaatttggcatctgctgacactgtagtt
atatttgattctgactggaatccacaaaatgatctgcaagcacaggctagagctcatagg
attggacaaaagaaacaggttaatatttatcggctagtcacaaaaggatcagtagaagaa
gatattcttgaaagagccaagaaaaagatggtgttagatcatttagtgattcagagaatg
gacaccacagggaaaactgtactacatacaggctctactccttcaagctcaacacctttt
aataaggaagagttatcagcaattttgaagtttggtgctgaggaactttttaaagaacct
gaaggggaggaagaggagcctcaggagatggatatagatgaaatcctgaagagggctgaa
actcgagaaaatgagtcaggcccattaactgtaggagatgagttactttcacagttcaag
gtagctaacttttccaatatggatgaagatgacattgaattggaaccagaacaaaatcta
agaaactgggaagaaatcattccagaagttcagtggcgacgaatagaagaggaggaaaga
caaaaagaacttgaagaaatatatatgcttccaagaatgagaaactgtgcaaaacagatc
agctttaatggaaatgaagggagatgcagtaggagcagaagatattctggatctgatagt
gattccatctcagaaagaaaacgaccaaaaaaacgtggacgaccacgaactattccccgt
gaaaacattaaaggatttagtgatgcagagattagacgatttatcaagagttacaagaaa
tttggtggcccacttgaaaggttagatgctatagctagagatgctgagctagttgataaa
tctgaaacagaccttagacgtctgggagaacttgtacataatggatgcattaaggcttta
aatgataatgactttggtcaaggaagaacaggtggtagatttgggaaagttaaaggccca
acattccgaatagcaggagtgcaggtgaatgcaaagctagtcatttctcacgaagaagag
ttggcaccattgcataaatcgattccttcagatccagaagaaaggaaaagatatgtcatc
ccataccacaccaaagcagctcattttgatatagattggggtaaagaagatgattccaat
ctgttaataggcatctatgaatatggttatggcagttgggaaatgataaaaatggatcct
gatctcagtttgacacagaagattttacctgatgatccagataagaaaccccaggctaag
cagttacagactcgtgcagattacctcattaaattactgaataaagaccttgcaagaaag
gaagcacagagacttgctggtgcaggcaattcaaagaggagaaaaacaagaagtaagaag
aataaagcaacaaaggctgcaaaaataaaagaaataaagaatgactcctcatcaccaccc
tcagaaaaatctgatgatgataatgaggatgagattgtttcagtgaaacatccacataaa
aaaataaaagcagaaaaagaaaatgaagaaaaagatgagccagatattggtataaagaag
gaagctggagaaaaaagagagacaaaagaaaaggaaaataagagagatttgaaaagggag
aaaaaagaaaaagaggataagaaagaattaaaatatattaaagaaaagagagaaaacaaa
gtaaaagaattcatacagaaagtaaaagaagtaaaggaagagaaggtaaatgaaatcaaa
tctgaatataaagaaaaaaataaaaaagttccattattggatattccagttcatattact
gcaattagtgaaccagttcctatatctgacgaatctgaagaactggatcagaagacattc
agtgtgtgcaaagaaagaatgaggcctgttaaagcagcactgaaacaactggatcgacca
gagaaaggcctttctgaaagggaacagctggaacatactagacagtgcctaatcaaaatt
ggggaccacattactgaatgtttaaaggagtacacaaatcctgaacaaattaaacagtgg
agaaaaaacttgtggatttttgtctctaagtttacagaatttgatgccagaaagttgcac
aaactatataagcatgcaatcaaaaaacgccaagaatctcagcaacacagtgaccagaac
attgctgctaatgtgaacacacaagtaattagaaatccaaatgtggaaagtctaaaagag
aatacaaaccatgatgacagtatcagggacagttattcttctgacagacatttgtgtcag
taccatgatcatcataaggacagatatcagggagatacttataagaaaagtgactctagg
aaaaggccctattcagacttcagcaatggaaaagatcatagagactgggatcactacaaa
gacagcagatactgtagtgatagtaagcatagaaagttggatggccataggagcagagat
cacaagtcaaacctagaaggaagtttaaaagacagcaggcctcattcagatcaccgttcc
cattcagatcaccggatacattcagatcaccgttccacttcagagtacagccatcataaa
tcttccagagattataggtaccactcagactggcaaatggaccaccgagcttctggtagt
ggctcaaggtcaccattagatcagaggtctccttatggttcaagatctccatttgaacac
tcatcagatcacaaaagtacacctgaacatacatggagtggctggaaaacataa
DBGET
integrated database retrieval system
