KEGG   Gallus gallus (chicken): 374224
Entry
374224            CDS       T01006                                 
Symbol
PAFAH1B1
Name
(RefSeq) lissencephaly-1 homolog
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
gga  Gallus gallus (chicken)
Pathway
gga00565  Ether lipid metabolism
gga01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:gga00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    374224 (PAFAH1B1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gga03036]
    374224 (PAFAH1B1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gga04147]
    374224 (PAFAH1B1)
Chromosome and associated proteins [BR:gga03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    374224 (PAFAH1B1)
Exosome [BR:gga04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   374224 (PAFAH1B1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_CAF1B_HIR1 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_EML Beta-prop_SCAP NBCH_WD40 WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_Nup120_160 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_SPT8 LisH Beta-prop_DCAF12 LisH_PAC1 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_RIG_1st eIF2A Beta-prop_WDR75_2nd Nucleoporin_N Beta-prop_WDR19_1st Ge1_WD40 Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Pox_A_type_inc Beta-prop_WDR11_2nd ARMC9_LisH LisH_2 SutA-RBD
Other DBs
NCBI-GeneID: 374224
NCBI-ProteinID: NP_989655
CGNC: 4356
Ensembl: ENSGALG00000005834
UniProt: Q9PTR5
LinkDB
Position
19:9585935..9615086
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDVNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV
RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSE
TKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK
TLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctctcacaaaggcaacgagatgaactaaatcgagcaatagcagattaccttcgc
tctaatggctatgaagaggcatattcagtttttaaaaaggaagctgagttagatgtgaat
gaagagttagataagaagtatgcaggacttctggagaaaaaatggacatcggttataaga
ttacaaaagaaggtaatggaattagaatcgaagctgaatgaagctaaggaagaatttaca
tcaggtggacctcttggtcagaaacgagaccctaaggagtggattcctcgtcctccagag
aagtatgctttgagtggacataggagtcctgtcactcgagtaattttccatccagttttc
agtgtaatggtttctgcttcagaggatgccacaataaaggtgtgggattatgagacagga
gactttgaacgaacccttaaggggcatacagactctgtgcaagatatttcctttgaccac
actggcaaactgttggcctcctgttctgctgatatgaccattaagctatgggatttccag
ggctttgagtgcatcagaactatgcatggtcatgatcacaatgtttcttcggtagccatc
atgcccaatggagatcatatagtttctgcctcgagggataaaactatcaaaatgtgggaa
gtccaaacaggttactgtgtgaagactttcacgggtcacagagaatgggtgcgcatggtg
cggcctaaccaggatggcaccttaattgccagttgttctaatgaccagacagtgcgtgtt
tgggtggtagcaacaaaggaatgcaaagctgagctccgagaacatgagcatgtggtagaa
tgcatttcctgggctcctgagagctcatactccaccatatcagaagctacaggatcagag
actaagaagagtggtaagcctgggccttttctgctgtctggatccagagacaaaaccatt
aagatgtgggacatcagcactggcatgtgccttatgacacttgtgggccatgataactgg
gtacgtggcgttctgttccattctgggggaaagtttattttgagctgtgctgatgacaag
actctacgtgtctgggacttcaagaacaaacgatgcatgaaaaccctcaatgcgcacgaa
cactttgttacctctttggatttccacaagacggcaccatatgtggttactggaagtgta
gatcaaacagtaaaagtgtgggagtgccgttga

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