Gallus gallus (chicken): 374240
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Entry
374240 CDS
T01006
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gga03000
]
374240 (SOX1)
Transcription factors [BR:
gga03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
374240 (SOX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
374240
NCBI-ProteinID:
NP_989664
CGNC:
20064
Ensembl:
ENSGALG00000030353
UniProt:
O57401
LinkDB
All DBs
Position
1:141152094..141154399
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AA seq
373 aa
AA seq
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MYSMMMETDLHSPGGAPAPGGGLSGQSGAGGGGGGGGGGGGKAGQDRVKRPMNAFMVWSR
GQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPR
RKTKTLLKKDKYSLAGGLLGAGPAAGGPPAVGVGMGVGVIPGGVGQRLESPGGAAGGGYA
HMNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGGGGHPHHPHPHHPHHPHNPQPMHR
YDMGALQYSPISNSQGYVSASPSGYGALPYGSQPHQNSAAAAAAAAAAAAASSGALGALG
SLVKSEPSVSPPVTSHSRAPCPGDLREMISMYLPGGEGGDPAAAAAQSRLHSLPQHYQSA
STGVNGTVPLTHI
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagacggacttgcactcgcccggcggagccccggcgcccggc
ggcggcctctcggggcagagcggcgcgggcggcggcggcggcggcggcggcggcggcggg
ggcaaagcggggcaggaccgcgtgaagcgccccatgaacgccttcatggtgtggtcgcgg
gggcagcggcggaagatggcccaggagaatcccaagatgcacaactcggagatcagcaag
cggctgggcgccgagtggaaggtgatgtcggaggccgagaagcggcctttcatcgacgag
gcgaagcggctgcgggcgctgcacatgaaggagcacccggattataaataccggccccgg
cggaagaccaagacgctgctcaagaaggacaagtactcgctggccggagggctgctgggc
gccggcccggccgcgggcggccctcccgccgtcggcgtgggcatgggcgtcggcgtgatc
cccggcggagtcgggcagcggctggagagccccggcggggcggcgggcggcggctacgcg
cacatgaacgggtgggccaacggcgcctacccgggctcggtggcggcggcggcggcggcg
gcggcgatgatgcaggaggcgcagctcgcctacgggcagcacccgggcggcggggggcac
ccgcaccacccgcacccgcaccacccgcaccacccgcacaacccgcagcccatgcaccgc
tacgacatgggcgcgctgcagtacagccccatctccaactcgcagggctacgtgagcgcc
tcgccctcgggctacggcgcgctgccctacggctcgcagccccaccagaactcggcggcc
gcggcggcggcggcggcggcggcggcggccgcctcgtcgggcgcgctgggcgcgctgggc
tcgctcgtcaagtcggagcccagcgtgagcccgcccgtcacctcgcactcgcgggccccg
tgccccggggacctgcgggagatgatcagtatgtacttaccgggcggcgagggaggcgac
ccggcggccgccgccgcccagagccgcctgcactccctgccccagcactaccagagcgcc
agcacgggggtcaacggcaccgtccccttgacgcacatctga
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integrated database retrieval system
