Gallus gallus (chicken): 395069
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Entry
395069 CDS
T01006
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain precursor
KO
K19719
collagen type II alpha
Organism
gga
Gallus gallus (chicken)
Pathway
gga04510
Focal adhesion
gga04512
ECM-receptor interaction
gga04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
395069 (COL2A1)
04518 Integrin signaling
395069 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
395069 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gga00536
]
395069 (COL2A1)
Glycosaminoglycan binding proteins [BR:
gga00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
395069 (COL2A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
395069
NCBI-ProteinID:
NP_989757
CGNC:
49161
Ensembl:
ENSGALG00000030712
UniProt:
Q90W37
LinkDB
All DBs
Position
34:complement(1138569..1141506)
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AA seq
1420 aa
AA seq
DB search
MHGRRPPRSAALLLLLLLLTAAAAAQDRDLRQPGPKGQKGEPGDIKDVVGPRGPPGPQGP
AGEQGQRGDRGEKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGF
DEKAGGAQMGVMQGPMGPMGPRGPPGPTGAPGPQGFQGNPGEPGEPGAAGPMGPRGPPGP
PGKPGDDGETGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGA
KGESGSPGENGSPGPMGPRGLPGERGRPGPSGAAGARGNDGLPGPAGPPGPVGPAGAPGF
PGAPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGAPGNPGTDGIPGAKGSAGAPGI
AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQGAPGPAGE
EGKRGARGEPGAAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPAGLAGPKGATGD
PGRPGEPGLPGARGLTGRPGDAGPQGKVGPTGAPGEDGRPGPPGPQGARGQPGVMGFPGP
KGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPVGERGEQGAPGPSGFQGL
PGPPGPPGESGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGT
DGPKGATGPAGPNGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGARGL
TGPIGPPGPAGPNGEKGESGPPGPSGAAGARGAPGERGEPGAPGPAGFAGPPGADGQPGA
KGEQGEPGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGP
PGPNGNPGPPGPPGSAGKDGPKGVRGDAGPPGRAGDPGLQGPAGPPGEKGEPGEDGPAGP
DGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGSAGDRGPPGPVGPPGL
TGPAGEPGREGNPGADGPPGRDGAAGVKGDRGETGPVGAPGAPGAPGAPGPVGPTGKQGD
RGETGAQGPMGPSGPAGARGMPGPQGPRGDKGETGEAGERGLKGHRGFTGLQGLPGPPGP
SGDQGAAGPAGPSGPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGEPGPAGPPGNPGP
PGPPGPPGTGIDMSAFAGLGQTEKGPDPIRYMRADEAAGGLRQHDVEVDATLKSLNNQIE
SIRSPEGSKKNPARTCRDIKLCHPEWKSGDYWIDPNQGCTLDAIKVFCNMETGETCVYPT
PSSIPRKNWWTSKTKDKKHVWFAETINGGFHFSYGDENLSPNTASIQMTFLRLLSTEGSQ
NVTYHCKNSIAYMDEETGNLKKAILIQGSNDVEIRAEGNSRFTYSVLEDGCTKHTGKWGK
TVIEYRSQKTSRLPIVDIAPMDIGGADQEFGVDIGPVCFL
NT seq
165 nt
NT seq
+upstream
nt +downstream
nt
atgcacggccgccgcccgccccgctccgccgctctcctcctcctcctcctccttctcacg
gccgccgcagccgcgcaggaccgcgacctcggacagcgtggcggacaggtggacaaagtg
ggcggtcccactgggacggggtcccactggggacatctcttggga
DBGET
integrated database retrieval system
