Gallus gallus (chicken): 395372
Help
Entry
395372 CDS
T01006
Symbol
CLSTN1, CALSYNTENIN-1
Name
(RefSeq) calsyntenin-1 precursor
KO
K22659
calsyntenin 1
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gga04515
]
395372 (CLSTN1)
Cell adhesion molecules [BR:
gga04515
]
Cadherins
Cadherin related
395372 (CLSTN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Ig_CLSTN
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
Glyco_hydro_16
EphA2_TM
Toxin_R_bind_N
V_ATPase_I
PFF1_TM
SID-1_RNA_chan
Cadherin_C_2
Neur_chan_memb
Zip
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
395372
NCBI-ProteinID:
NP_001183979
CGNC:
1874
Ensembl:
ENSGALG00000002606
UniProt:
E1BYQ5
Q9DDD3
LinkDB
All DBs
Position
21:complement(3489329..3523966)
Genome browser
AA seq
971 aa
AA seq
DB search
MPPPARCLLLLAALLCGGAGAARVNKHKPWIETTYHGIVTENDNTVLLDPPLIALDKDAP
LRFAESFEVTVTKEGEICGFKIHGQNVPFEAVVVDKSTGEGIIRSKEKLDCELQKDYTFT
IQAYDCGKGPDGANAKKSHKATVHIQVNDVNEYSPVFKEKSYKATVIEGKRYDNILKVEA
VDADCSPQFSQICNYEIVTPDVPFAIDKDGYIKNTEKLSYGKEHQYKLTVTAYDCGKKRA
AEDVLVKISIKPTCKPGWQGWSKRIEYEPGTGSLALFPSMRLETCDEPITSIQATVELET
NHIGKGCDRDTYSEKSIHRLCGAASGTAELLPSPSSAANWTIGLPTDNGHDSDQVFEFNG
TQAVKIPDGVVTVNLKEPFMISVWMRHGPGTKEKETILCNSDKTDMNRHHYTLYVHNCRL
VFLFRQDPSEGKTYKPAEFHWKLNQVCDKEWHHYVLNVEFPAVTLYVDGVSYDPFPVTED
YPLHPSKIETQLVVGACWQEYTGNENDNETLPETSAGGELRMAQFFRGNLAGLMIRSGKL
ENKKVIDCLYTCKEGLDLQIADGVGKGVKIHMNPSQSAVTIEGDDIDRVDKAMQHISYLN
SRQFPTPGIRRLKITSTVKCFNEEACVSIPSVEGYVMVLQPEEPKISLSGINHFARSASE
FESSEGISLFPELRIISTITREVEPDGDGDEDPTVQESLVSEEIMHNLDTCEVTVVGEEL
NQDQESLEVDMTRLQQKGIEMSSSNLGMIITGVDTMASYEEVLHLIRYRNWHTVSLFDRK
FKLVCSELNGRYVSNEFKVEVNVIHTANPIEHANHIAAQPQFVHPVHHTFVDLSGHNLAN
PHPFSVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENEMDWDDSALT
ITVNPMETYEDQHSSEEEEEEEEEESEDGEEDDITSAESESSEEEEGEQEEDQQNVNRQQ
QLEWDDSTLSY
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgccgccccccgcccgctgcctgctgctgctggccgcgctgctctgcggaggagccggg
gccgctcgagttaacaagcataagccatggattgaaacgacgtatcatgggatagtcaca
gaaaatgacaacacagttctcctggacccccctttaatagccctggacaaagatgcacct
ctgcgttttgcagagagttttgaggtgacagtcaccaaagaaggtgagatttgtggattt
aaaattcatgggcagaatgtcccctttgaagcagtggtagtggataaatccactggtgag
ggaataatacgctccaaagaaaaactcgactgtgaactacagaaggactacacgttcacc
atacaggcctatgactgtgggaagggaccagatggagcaaatgcaaaaaaatcccacaaa
gcaacggtacacattcaggtgaacgatgttaatgagtattctcccgtgttcaaagagaaa
tcatacaaggcaacggttattgaagggaagaggtacgataacatcctgaaagtagaagca
gtggatgcagattgttcacctcagttcagccagatctgcaactatgaaattgtaactcca
gatgttccttttgctattgacaaagacggttatataaaaaacacagaaaagttgagctat
ggcaaagagcatcagtataaactgacagtaactgcgtatgactgtgggaagaagagagct
gctgaggatgtattggttaaaattagcattaagcctacatgcaagcctggctggcaaggt
tggagcaaaagaatagaatatgaacctggtactggttctttagcactcttcccaagtatg
cgtttggagacatgtgatgaaccaataacctcaattcaggcaacagttgaactagaaacc
aatcacattgggaaaggctgtgatagagacacctattcagagaaatccattcacagactc
tgtggtgctgcttctggcacagctgaactgcttccttctccaagtagtgctgcgaactgg
acgataggacttcctactgataatggtcacgacagcgaccaagtctttgagtttaatggc
acacaggctgtgaagattccagatggtgttgtcacagtcaatctgaaagaacccttcatg
atttcagtgtggatgaggcatgggcctggaaccaaagagaaggagacaattctttgcaat
tcagacaagacagatatgaatcgacaccactacacgctgtatgtgcacaactgccgcctt
gttttcctctttcgacaagatccttcagagggaaagacatacaagcctgcagaattccac
tggaagctaaaccaagtttgtgacaaagaatggcaccattatgtcctcaatgttgaattt
cctgcagtgacactttatgtagatggtgtttcatacgatcctttcccagtgactgaagat
tatccgcttcatccttcaaaaatagaaactcagctagtagttggagcgtgctggcaagaa
tatacaggaaatgaaaatgacaatgaaaccctgcctgagacctctgcaggtggtgaactc
cgcatggctcagttcttccgaggcaatctggcaggtttgatgattcgttctggtaaactg
gaaaacaagaaagtgatagattgcctgtatacctgcaaggaggggctggatttgcaaatt
gccgatggtgttggcaaaggcgtgaagatccacatgaaccctagtcagtcagcagtgacc
atagaaggggatgatattgacagagttgataaggccatgcagcacatttcctatctgaat
tctcgccaattcccaacacctggaatccggaggcttaaaatcaccagtactgtcaagtgt
ttcaatgaagaggcctgtgtctctattccttctgtggagggatatgtaatggtcttgcaa
ccagaggaaccaaaaatcagtctgagtggcatcaaccattttgccagatctgcttcagag
tttgagagttctgagggtatttccctcttccctgagctccgtataataagcaccattaca
cgggaggtggagccagatggagatggggatgaagatcctacagtacaagagtctttggtt
tctgaagaaatcatgcataacctggatacgtgtgaggtgacagtggtgggagaagaacta
aatcaggatcaagaaagcctggaggttgacatgacacgattacagcagaagggcattgag
atgagtagttccaaccttggcatgatcatcacaggagttgatactatggctagctatgag
gaagtcttgcatttgatacgctacagaaactggcacaccgtttctctttttgacaggaag
ttcaaattggtttgttctgagcttaatgggcgctatgtcagcaatgagtttaaagtagag
gtgaatgttatccacacagctaaccccattgaacacgctaatcacatagctgcacaacca
cagtttgtacatccggtgcaccacacgtttgttgatctgtctggtcacaacctagctaac
cctcatccattttcagttgttccaagtacagccactgttgtgattgtagtttgtgtgagt
ttcctggtttttatgattattctgggagtgttcagaatccgagctgcacatcagcgaaca
atgcgtgaccaggatactggaaaggaaaatgagatggactgggatgactctgcattgacc
atcactgtgaatcctatggaaacttacgaggatcagcacagcagtgaagaagaggaggag
gaagaggaagaggaaagcgaagatggagaagaggatgacatcactagtgcagagtctgaa
agcagtgaggaagaggaaggcgagcaggaggaggaccaacagaatgttaatagacagcaa
cagctggaatgggatgactctaccctcagttattga
DBGET
integrated database retrieval system
