Gallus gallus (chicken): 395530
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Entry
395530 CDS
T01006
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain precursor
KO
K06237
collagen type IV alpha
Organism
gga
Gallus gallus (chicken)
Pathway
gga04510
Focal adhesion
gga04512
ECM-receptor interaction
gga04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
395530 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
395530 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
395530 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gga04147
]
395530 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
gga00536
]
395530 (COL4A1)
Exosome [BR:
gga04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
395530 (COL4A1)
Glycosaminoglycan binding proteins [BR:
gga00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
395530 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
395530
NCBI-ProteinID:
NP_001155871
CGNC:
12637
Ensembl:
ENSGALG00000036798
UniProt:
A0A1D5P8P3
LinkDB
All DBs
Position
1:complement(140137042..140249110)
Genome browser
AA seq
1669 aa
AA seq
DB search
MWRWLGFGLLLSAELSAVSAAGCSGCGKCDCSGVKGQKGERGLPGLQGVIGFPGMQGPEG
PPGPPGLKGDTGEPGLPGTKGTRGPPGPSGFPGNPGLPGIPGQDGPPGPPGIPGCNGTKG
ERGPVGPPGLPGLTGSIGPPGPPGIKGDPGEVIGILPPSVLKGDKGFPGQPGLPGPPGTP
GFQGPMGPPGIPGEPGPPGPPGPPGEKGYMGLGFQGPKGEKGEQGVQGPPGPPGPAPHMK
EKGSEIIKGEKGEPGEKGEQGVPGLPGSGYRGEKGEPGKPGPRGKPGKDGEPGPKGEPGL
PGGFGIPGRPGEPGAKGEKGDQGPQGPPGRIIDAGPIDTFGEKGDPGVSGLPGLKGQKGE
KGFPGAQGIPGIPGRPVPDMVGSPGVPGQRGEKGEKGSPGFPIPGPPGRDGFPGPPGLPG
PPGPPGVTDGIDQCQQGQPGAPGVPGPPGQHGFPGEMGEKGEKGETCALCDKVGPPGLPG
PQGLPGPAGFPGQSGFKGDRGLPGLDGLPGVPGPPGAPGLIGLPGAKGEPGDFTYDSILK
GEKGDPGFPGQPGIPGREGTPGKDGLPGPQGPKGASGTAGLKGERGPPGQPGFPGVRGER
GLPGSPGVGTAGLPGDKGERGFAGTPGLPGLPGTKGEAGRTVPLPGPPGADGLPGPPGFP
GPQGDKGNPGLPGRPGLPGEKGAVGQPGIGFPGPPGPKGFPGQPGSPGPPGTPGTPGLDG
FPGTPGLQGQKGEPGVGLPGPKGLPGIPGPAGIPGEKGNPGLPGLRGEQGFPGVPGQQGF
RGDPGLPGLQGLPGPQGSPGVGPPGLPGPAGQPGPEGPPGFPGIKGERGFPGIPGLDMPG
PKGDKGSQGQPGVPGSVGLPGLPGPQGSVGLKGSAGAKGEMGVMGTPGLPGTPGPVGDRG
LPGEKGSQGLKGVVGPQGEPGVKGDKGEAGLPGIPGSMDTMDMVSLKGQKGDPGEKGDLG
PTGEKGLRGEYGEPGIPGRDGEPGTPGQPGPKGDQGPPGYPGDPGIPGQKGSVGEMGLPG
TPGEKGLPGIPGSPGTPGFPGQKGEKGDKGAAGFPGIGFPGSPGEKGEPGRTGSPGLSGD
KGEKGNAGIPGMPGAPGPKGSPGIAGFPGNPGLHGAKGEKGLPGLSGIPGLKGEPGEPGV
PGPAGSIGQKGEPGYDGIPGTAGAKGEQGVPGRGVPGYPGAKGDKGAKGEVGFPGSPGIP
GIPGLKGEQGYAGPPGPKGNQGLPGLPGSAIEGPKGDRGPQGQPGLPGLPGPTGPPGPPG
LKGAKGEQGSDGWPGTPGGPGDKGDPGFQGLPGSPGLPGGAGEKGDLGPPGVPGVPGPKG
SAGFPGLKGERGDQGLPGSKGLQGPPGPPGAFQLIKGDPGLPGPVGPVGLKGFPGHPGPK
GQQGVTGPSGVPGPPGSPGFDGRPGQKGEVGPYGPPGPRGIPGPPGPEGLPGAMGPPGAA
SVAHGFLVTRHSQTTEEPQCPFGTRLIYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM
PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGESIRPFISRCSVCEAPAMVIAV
HSQTIQIPPCPEGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG
TCNYYANAYSFWLATIERNEMFKKPTPSTLKAGDLRSNVSRCQVCMRNT
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgttggctgggcttcgggctgctgctgagcgccgagctcagcgccgtgtccgcc
gcgggttgttctggttgtggaaaatgtgactgcagtggagtaaaaggacaaaagggagaa
agaggccttccgggactacagggtgtgattgggtttcctggaatgcaaggacctgaaggt
ccccctgggccaccaggacttaagggtgatactggagaaccagggctgccaggaacaaaa
ggaacaagaggcccaccaggaccatcaggatttccaggaaacccaggcctccctggcatt
cctggacaagatggccctcctggtccacctggcattccaggatgtaatggcacaaagggt
gaaagaggtccagtaggtcccccaggtttaccgggactgactggaagcataggaccccca
ggacctcctggaattaagggagatccaggtgaagtgattggtattttacctcctagtgtg
ctaaaaggtgataaaggctttcctggccaacctggactacctggtccacctggaactcca
gggtttcagggaccaatggggccaccagggattccaggagaaccaggtccccccgggcca
ccaggacccccaggcgagaagggctacatgggcttgggctttcaaggtcccaaaggtgaa
aagggagaacaaggggtccagggtcccccggggccaccaggaccagcaccacacatgaaa
gaaaaaggaagcgaaatcataaagggagaaaagggtgagccaggtgaaaagggtgaacag
ggagtcccaggattgccaggctcaggttacagaggagaaaagggtgaacctgggaagccc
ggtccacgtggaaagcctggaaaagatggtgaaccaggaccaaaaggagaacccggcttg
cctggagggtttgggattccaggaaggcctggggaacctggtgctaagggtgaaaaaggt
gatcaaggtcctcaagggcctccaggaagaattatagatgctggaccaatagatactttt
ggtgaaaaaggagaccctggagtttcaggtttgcctggactaaaaggtcaaaaaggtgaa
aaaggtttccctggtgcacaagggatcccaggaattccaggtcgaccagttccagacatg
gtaggatcacctggtgtccctggccagagaggtgaaaaaggtgaaaagggttctccagga
ttccctatacctggacctcctggaagagatggtttcccaggcccacccgggttgcccggc
ccaccaggtcctccaggtgtaacagatggaatagatcaatgtcagcaagggcaacctggt
gcaccaggtgtacctggacctccagggcaacatggatttccaggagagatgggagagaaa
ggtgaaaaaggtgaaacctgtgccttgtgtgataaagtaggaccccctggacttccagga
ccacaaggactaccgggtccagcaggttttccgggacagtcaggtttcaagggtgacaga
ggcttacctggacttgatggccttccaggcgtacccgggcccccaggcgctccaggactc
attggcctccctggggcaaaaggagaaccaggagactttacttatgattccatcctgaaa
ggtgagaagggagatcctggtttcccaggacaaccaggtattcctggaagagaaggaaca
ccaggaaaagacggattgccaggtcctcaaggtccaaaaggagcatcgggtacagctggc
ttgaaaggagaacgtggtccccctggacaacctggattccctggagtacgtggtgaaaga
ggtttacctggctctcctggggtaggcactgcagggttacctggtgacaaaggagagaga
ggttttgctggaactccaggtttaccaggtcttccaggaacaaaaggtgaagcaggacga
actgtaccactccctggacctcctggggcagatggccttcctggaccacctggtttccct
ggaccccaaggtgacaaagggaatcctgggcttccggggagacctggcctgccaggagaa
aaaggtgctgttgggcagccaggtatagggtttcctggacctccaggacccaaaggtttc
ccaggtcagcctggctcacctggtcctccgggtactcctggaacccctggcctggatggt
tttccaggcacaccaggtttacaaggtcaaaaaggtgaacctggagtgggtctccctggt
cctaaagggttaccaggcatcccaggtccagctggcatccctggagaaaaaggaaatcca
gggctgcctggcttacgaggtgaacaaggattcccaggtgtacctggacaacaaggattt
agaggagatccaggcctccctggactacagggcttgccaggcccccagggctcaccagga
gtgggcccaccgggattgccagggcccgctgggcagccaggacctgaggggccaccagga
tttcctggaataaaaggagaaaggggcttccctggtatcccaggtctagatatgccaggg
ccaaaaggagataaaggtagccagggccagcctggagtaccagggtctgtggggctacct
ggcctgccaggtccacaaggatctgttggactgaaaggatcagcaggagccaaaggagaa
atgggagttatgggaactccagggttgccagggactcctggaccagttggagatcgaggg
ttgcctggtgaaaaaggtagccaaggtttgaaaggtgtggttggaccacagggtgaacca
ggtgtcaaaggggataaaggtgaagctggtcttccgggaatacctggaagcatggacacc
atggacatggttagtctcaaaggccaaaagggagatcctggagaaaaaggggaccttggt
ccaacaggagaaaaagggttacgtggggagtatggagaaccaggaattccaggaagggat
ggtgaacctggtactccgggacaaccaggaccaaaaggagatcaaggccccccagggtac
ccaggagatccaggaattccagggcagaaaggatcagttggtgaaatgggtttgccagga
acacctggagaaaagggtctgcctggaataccaggttcaccaggcacaccagggttccct
gggcaaaaaggtgaaaaaggagacaaaggagcagcaggttttcctggaattggctttcca
ggatctcctggtgagaagggagaaccaggaagaacaggcagtccgggtttgtctggagac
aaaggtgaaaagggtaatgcaggaattccaggaatgccgggtgctccaggtcccaaagga
tcccctggcattgcaggatttccaggcaacccaggcctccatggagcaaagggtgaaaaa
ggacttcctggcttaagtggcatcccaggcttaaaaggagaaccaggtgaacctggtgtt
cctggtcctgctggttccattggtcagaagggtgaaccaggctatgatgggattccaggc
acagctggtgcaaagggtgaacaaggtgtaccaggtagaggagttccaggatatccaggt
gcaaagggagataaaggtgcaaagggtgaagtgggtttcccaggatccccaggaattcca
gggattccaggcttaaaaggagaacaagggtatgctggcccacccggccctaaaggcaac
caaggtcttcctggactaccaggaagtgcaattgagggccctaaaggagacagaggacca
caaggccaacccggccttccaggtttaccaggtccaacggggccaccaggacctccaggt
ctgaagggagctaaaggagagcagggaagcgatggctggcctggaactcctggaggtcca
ggagataaaggcgatccaggtttccagggactgccaggtagtcctggtttgccaggaggt
gctggtgaaaagggtgatctagggcctccaggtgttccaggtgttccaggtccaaaagga
tctgcaggcttcccaggcctcaagggtgagcgaggtgaccaaggtcttcctggatctaaa
ggtttacaaggcccgccgggccccccaggtgcttttcagcttatcaaaggagatcctggc
ttacctggcccggtaggaccagttggtctcaaaggattcccaggacatccaggtcccaaa
ggacagcaaggagtaacagggccttcaggtgtacctggaccacctggtagtccagggttt
gatggcagaccagggcaaaaaggagaagttggtccttatggtcctccagggcccagagga
atccctggtccgcctggccctgaaggtttgcctggggctatgggtccaccaggtgcagca
tctgttgctcatggcttccttgtcaccagacacagtcaaaccactgaagaaccacaatgt
ccatttggaacaaggctgatttaccatggctactcccttctttatgtacaaggaaatgaa
agagcacacggtcaagatctgggcactgcagggagctgtcttcgtaaatttagtactatg
cctttcttattttgcaatatcaacaatgtatgtaactttgcatcaaggaatgactattcc
tactggctgtccactcctgaacccatgccaatgagtatggcacctatcactggtgaaagt
atcagaccattcatcagcagatgctctgtgtgtgaagctcctgctatggtaatcgccgtt
cacagtcaaacaatccagataccaccatgtcctgaaggctggagttccctttggattggt
tactcctttgtcatgcacaccagtgctggtgctgagggctctggccaggccctggcgtct
cctggttcctgcctggaggagttccgcagcgctcccttcattgaatgccatggccggggc
acctgcaattattatgcaaatgcttacagcttctggcttgccactatagagaggaatgag
atgttcaagaaaccgactccgtcaactttgaaagcaggggatctgcgctccaacgttagc
cgttgtcaagtctgtatgagaaatacataa
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integrated database retrieval system
