Gallus gallus (chicken): 395803
Help
Entry
395803 CDS
T01006
Symbol
SFPQ
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X2
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gga01009
]
395803 (SFPQ)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gga03021
]
395803 (SFPQ)
03041 Spliceosome [BR:
gga03041
]
395803 (SFPQ)
Protein phosphatases and associated proteins [BR:
gga01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
395803 (SFPQ)
Transcription machinery [BR:
gga03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
395803 (SFPQ)
Spliceosome [BR:
gga03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
395803 (SFPQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
395803
NCBI-ProteinID:
XP_040507707
CGNC:
49487
Ensembl:
ENSGALG00000002514
LinkDB
All DBs
Position
23:4753837..4768451
Genome browser
AA seq
608 aa
AA seq
DB search
MSRDRFRSRGGGGGGFHRRGGGGGRGGPNHDFRSPPPGMGMGQNRGPMGGGPQGPGGPPG
GGPKSEPPKPPASTSAPPSSSSSSSATTAGPAGSQSGPGAPPPSALPAGQPPQQQAQGSA
PSSAPSGPGGQQQPQPKPSPSPTPAGGPKKGQGQSPGGGPKGPGGPQQGPGGPHKGGPGH
RGGPGGESRGRGQQHQGQQSLSSQQGPAGGDKLSDEGFKANLSLLRRPGEKTYTQRCRLF
VGNLPADITDEDFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRGR
QLRVRFATHAAALSVRNLSPYVSNELLEEAFSQFGPVERAVVIVDDRGRSTGKGIVEFAS
KPAARKAFERCTEGVFLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPRF
AQPGSFEFEYSQRWKSLDEMEKQQREQVAKNMKDAKDKLESEMEDAYHEHQANLLRQDLM
RRQEELRRMEELHNQEMQKRKEIQLRQEEERRRREEEMMIRQREMEEQMRRQREENYSRM
GYMDPRERDMRMGGATTMNMGDPYASAAQKFPPLGGGGGIGYEANPGVGQAAMSGSMMGS
DMVKMRAE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgggatcggttccgtagccgtggaggcggcggagggggcttccatcggcgcggc
ggcggcggtggccgcggcggccccaaccacgatttccgttctccgccgcccggcatgggc
atgggccagaaccgcgggcctatggggggcggcccgcagggccccggcggccctccagga
ggaggcccgaagtccgaaccgccgaagcctccagcgtcgacctccgctccgccgtcctcg
tcctcttcatcctccgccaccacagcaggccccgccggcagccagtccggccccggggcg
cctcctccgtccgccctgcccgcggggcagccgccgcagcagcaggcccagggctccgcg
ccctcctccgctccctccggccccggggggcagcagcagccgcagcccaagccgagcccc
agccccaccccggccggcggccctaagaaaggacaaggacagtctcccggcggcgggccc
aaggggccgggcgggccgcagcaggggccgggcgggcctcacaaaggcgggccgggccac
cgcggcgggccgggcggggagtcgcggggccgcgggcagcagcaccagggacagcagagc
ctctcttcgcagcagggcccggccggcggcgacaagctttcggacgagggctttaaggca
aacctctcactgttgaggaggcccggggagaagacttacactcagcggtgccgtttgttt
gttgggaatttgcctgccgatataacggatgaagactttaaaagattgtttgccaaatac
ggggagccgggagaggtttttatcaacaaaggaaaaggctttggattcattaagttggag
tccagagctctggcagaaatcgcaaaggcagaactggacgacacccccatgcggggccga
cagctccgtgttcggtttgccacgcacgctgccgcgctgtcagtgcgtaacctttcgcct
tacgtgtccaacgagttactggaggaggctttctcccagtttggtccggtggagagagct
gttgtgattgtagatgatcgaggtagatcaacaggaaaaggcattgttgaatttgcatca
aagccagctgccagaaaagcgtttgaacggtgtactgagggagtgttcttgttgacaacc
actcctaggccagttattgtggaacctttggagcaactggatgatgaagatggtcttcca
gaaaagcttgctcagaagaacccgatgtatcaaaaggaaagagaaactcctccccgtttt
gctcagcctggcagttttgagtttgagtattcccagagatggaaatctttagatgaaatg
gaaaaacaacagagagaacaagtggcaaaaaacatgaaagatgccaaggacaaacttgag
agtgagatggaagatgcttatcatgagcatcaggcaaaccttttgcgtcaagaccttatg
aggcgtcaggaggaactgagacgtatggaagaactccataatcaagaaatgcagaaacgc
aaggaaattcagctcaggcaggaggaggagcgtcgcagacgggaggaggaaatgatgatc
cgtcagcgagaaatggaagaacagatgagaaggcagagggaagagaattatagtagaatg
ggttatatggatcccagggagagagacatgagaatgggtggtgccaccacaatgaacatg
ggagatccttatgcttctgcagcccagaaatttccacctcttgggggtggaggcggcata
ggttatgaagctaatccaggagttggccaagcagccatgagtggttctatgatgggaagt
gacatggtgaagatgcgagctgagtga
DBGET
integrated database retrieval system
