Gallus gallus (chicken): 395985
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Entry
395985 CDS
T01006
Symbol
CATSPER2
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1S isoform 1
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
gga
Gallus gallus (chicken)
Pathway
gga04010
MAPK signaling pathway
gga04020
Calcium signaling pathway
gga04260
Cardiac muscle contraction
gga04261
Adrenergic signaling in cardiomyocytes
gga04270
Vascular smooth muscle contraction
gga04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
395985 (CATSPER2)
04020 Calcium signaling pathway
395985 (CATSPER2)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
395985 (CATSPER2)
09153 Circulatory system
04260 Cardiac muscle contraction
395985 (CATSPER2)
04261 Adrenergic signaling in cardiomyocytes
395985 (CATSPER2)
04270 Vascular smooth muscle contraction
395985 (CATSPER2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gga04040
]
395985 (CATSPER2)
Ion channels [BR:
gga04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
395985 (CATSPER2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
395985
NCBI-ProteinID:
NP_001292076
CGNC:
49591
Ensembl:
ENSGALG00000037744
LinkDB
All DBs
Position
26:259084..288754
Genome browser
AA seq
1836 aa
AA seq
DB search
MEPASHQDDVKKRQQKEKSKKPVPPVAPRPPRALFCLTLQNPLRKACISIVEWKPFEIII
LLTIFANCVALAIYQPMPEDDTNVANSSLEKLEYVFLIFFAIEAMLKIIAYGFLFHTDAY
LRNGWNVLDFSIVSLGLVTMTLEQINAKEGGSLGGKGGFDVKALRAFRVLRPLRLVSGVP
SLQVVLNSIIKAMVPLLHIALLVLFMIIIYAIVGQELFKGKMHKTCYYLGTDVIATVGSE
KPAPCTTSGHGRHCSINGTECRGGWPGPNNGITHFDNFGFAMLTVYQCITMEGWTEVLYW
VNDAIGNEWPWIYFVSLILLGSFFVLNLVLGVLSGEFTKEREKAKSRGTFQKLREKQQLE
EDMKGYMDWITHAEVMDSDRARGEGMMPLDEGGSETESLYEIEGMNKWILYFRQWRRWNR
MFRRKCRDVVKSKFFYWLVILLVALNTLSIASEHHFQPEWLTIVQDNANRVLLALFVAEM
LLKMYALGLRQYFMSLFNRFDCFVVCAGVLEIILVELSTLSPLGISVLRCIRLLRIFKIT
RYWTSLSNLVASLLNSVRSIASLLLLLFLFIIVFALLGMQLFGGMYDFEDMEVRRSTFDN
FPQALISVFQILTGEDWNSIMYNGIMAYGGPSFPGMLVCIYFIILFVCGNYILLNVFLAI
AVDNLAEAESLTSAQKAKAEERKRRKMSRGYPEKSEDEKQMLAKKLEQKAKGEGIPTTAK
LKVDEFESNVNEIKDPYPSADFPGDDEEDEPEIPLSPRPRPLAELQLKEKAVPMPEASSF
FIFSPTNKFRMLCHRIVNATWFTNFILLFILLSSISLAAEDPIRAESFRNQILGYFDIGF
TSVFTVEIVLKMTAYGAFLHKGSFCRNSFNILDLLVVAVSLISMGFESSTISVVKILRVL
RVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVVVTTLLQFMFACIGVQLFKGKFYSCTD
PSKLTEKECRGHFINYVDGDPTQIELKERVWFHNAFHFNNVLSAMMSLFTVSTFEGWPEL
LYRAIDTNDENKGPIYNYRVEIAMFFIIYIILIAFFMMNIFVGFVIVTFQEQGESEYKNC
ELDKNQRQCVQYALKARPLRRYIPKNPYQYQIWYVVTSSYFEYLMFFLIMLNTICLGMQH
YNQSAEMNHVSDILNVAFTVLFTLEMILKLMAFKAKGYFGDPWNVFDFLIVIGSIIDVIL
SEIDTVLASSGGLYCLGGGCDSIDPDDNSRVSITFFRLFRVMRLVKLLSRGEGVRTLLWT
FIKSFQALPYVALLIVMLFFIYAVIGMQMFGKIAMVDGTQINRNNNFQTFPQAVLLLFRC
ATGEAWQEILLDCSYGKRCDPESDYAEGEEYTCGTGFAYFYFISFYMLCAFLIINLFVAV
IMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKFC
PHRVACKRLVCMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEQANEELRTIIKKIWK
RTSMKLLDQVIPPIGDDEVTVGKFYATFLIQEHFRKFMKRQEEYYGYRPKKNPVEIQAGL
RSIEEEAAPEIHRAISGDLTAEEELERAMVEAAMEEGIYRRTGGLFGQVDSFLEPSSPLQ
PHVASQRPLQFTEVGSEDLDSPVFLDDFPQEGNTNVNNANWQQGLEYEDEVLRRAVPRPP
VREPDLPIPLERLRRRRGAASEHHPASGPSLHPQQGSTVTAAASSSEHRWHESIDTNTSS
TPAITFLIQEALISGGLAALARDPSFVAVTRDEMAASSQMEMDEVEKAAVELLQGREALQ
DTEISSAPRDTLAASAVSTPGLSVAASHQTSSAARL
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgcgtcccaccaggatgatgtgaagaagaggcaacagaaggagaaatccaag
aagccggtgccaccagtagcccctcggccacccagggctctgttctgcttaaccctacag
aacccactgcggaaggcatgcatcagcatcgtggagtggaaacctttcgagatcatcatc
cttctgaccatctttgccaactgtgttgccctggccatctaccagcccatgccggaggat
gacaccaacgtggccaactccagcctggagaagttggaatatgtcttcctgatcttcttt
gccatcgaggccatgctcaagataatagcttacgggtttctgttccatacggacgcctat
ctccgaaacggctggaacgtcctcgacttctccatcgtttccctggggcttgtcaccatg
accctggagcagatcaatgcaaaggagggagggtctttgggagggaaaggtggctttgat
gtgaaggccctgcgagcgtttcgtgtgctgagacctctgcgcctggtgtccggagtgcca
agtcttcaggttgtcctgaactccattatcaaagccatggtgcctctgctccacattgca
ctgctcgtcctcttcatgatcatcatctatgccatcgtggggcaagagctcttcaagggc
aagatgcacaagacctgctactaccttgggacagatgtgatcgccacggtggggtcagag
aagccagccccctgcacaacctctggccatgggcgtcactgctccatcaatggcactgag
tgccgtggtggctggccgggacccaacaatggcatcactcacttcgataactttggcttt
gccatgctgactgtctaccagtgcatcaccatggagggctggaccgaagtgctctactgg
gttaacgatgccattggaaatgaatggccatggatctactttgtcagccttattttgctt
ggttccttctttgttctcaacctggtgctgggggtgctcagtggggagttcaccaaagag
cgtgagaaggccaagtcacgaggcacgtttcagaagctgcgggagaagcagcagctggag
gaggatatgaagggctacatggactggatcacccatgctgaggtgatggacagtgaccgg
gccagaggagaaggtatgatgccgttggatgaaggagggtcagagacagagagcttgtat
gaaattgagggcatgaacaaatggattctctacttccggcagtggaggcgttggaaccga
atgtttcgtaggaagtgcagggatgtggtgaaatccaagttcttctactggctggtcatc
ctgctggtggcactgaataccctctccatcgcctctgagcaccatttccagcccgaatgg
ctgacgattgtacaagataatgccaaccgggtgctgcttgctctctttgtggccgaaatg
ctgctgaagatgtatgcactgggcctgcgccagtacttcatgtccctcttcaaccgcttc
gactgctttgttgtgtgtgcgggggtcctggagatcatcctggtggagctcagcacgttg
tcacccctgggcatctctgtgctgcgctgcatccggctgctccgcatcttcaagatcacc
aggtattggacatcactgagtaacctggtggcctctctgctcaactcggtgcgctccatt
gcctctctgctccttctcctcttcctcttcatcattgtttttgccctactgggcatgcag
ctctttgggggcatgtatgacttcgaggacatggaggtgcgacgcagcacattcgacaac
ttcccccaggccctcatcagtgtcttccagatcctgactggagaggactggaattcaata
atgtacaatgggataatggcttatgggggcccatccttccctggcatgctggtctgcatc
tacttcatcatcctctttgtctgtgggaactatatcctcctcaacgtcttcctggccatt
gcagttgataatctggctgaggctgagagcctgacctcagctcagaaggccaaagctgag
gaacgcaagcggcggaagatgtccagaggttacccagagaagtctgaagatgaaaagcag
atgttggcaaagaagcttgagcagaaagcgaagggagaaggaattcccacaacagccaag
ttaaaagtggatgaatttgaatccaatgtcaatgagatcaaagatccctacccatccgca
gacttcccaggtgatgatgaggaggatgagcctgaaatccccctgagtcctcggccacgt
cctctggcagagctgcagctgaaagagaaggctgtgcctatgcctgaagccagctccttc
ttcatcttcagcccaacgaataagtttcggatgctgtgccacagaatcgtcaacgccact
tggttcaccaacttcatcctgctcttcatcttgctcagcagcatttccctggcagctgag
gatcccatccgagccgagtcattccgcaaccagattcttggatactttgacatcggtttc
acttctgtcttcactgttgaaatcgtcttgaagatgacagcatatggtgctttcctgcac
aaaggctccttctgcaggaactcgttcaacatcctcgacttgctggtggttgctgtgtct
ctcatctccatgggatttgagtccagcacaatctcagtggtgaagatcctccgggtgctg
agggtgctgaggcctctgcgagccattaacagggcaaaggggctgaagcacgtggttcag
tgtgtgttcgtggccatcaagaccattggtaacattgtggtcgttacgacgttgctgcag
ttcatgtttgcctgcattggggtgcagctcttcaagggcaagttttacagctgcacagat
ccctccaagctaacagagaaggagtgtagggggcatttcatcaactacgtggatggggac
ccaacgcagatcgagctgaaggagcgggtctggttccacaacgcctttcacttcaacaat
gtcctctcagccatgatgtcgcttttcactgtttccaccttcgagggctggccagagctg
ctgtacagggccattgacactaacgatgagaataaaggccctatctacaactaccgggtg
gagatcgcgatgttcttcatcatctacatcatcctcattgccttcttcatgatgaacatc
tttgtgggctttgtcattgtcaccttccaggagcagggggagagcgagtacaagaactgt
gagctggacaagaaccagcgccagtgtgtgcagtacgcactgaaggctcgcccgctgcgg
cggtacatccccaagaacccctaccaataccagatctggtacgtggtcacctcctcctac
ttcgagtacctcatgttcttcctgatcatgctgaacaccatctgcctgggcatgcagcat
tacaaccagtctgcggaaatgaaccacgtctcagacatcctcaatgtggccttcaccgtc
ctcttcaccctggagatgatcctcaagctcatggcctttaaagccaagggctactttggg
gacccctggaatgtcttcgacttcctcatagtgattggcagcatcattgatgtcattctc
agcgagattgatactgttcttgcatccagtggtggattgtactgcctcggcggaggttgt
gatagcattgacccggatgacaactcccgtgtctccatcacgttcttccggctgttccga
gtgatgcggctggtgaagctgctgagccggggagaaggcgtcaggaccctcctgtggacc
ttcatcaaatccttccaggctctgccctatgttgccctgctgatcgtgatgctgttcttc
atctatgctgtgatcgggatgcagatgtttgggaagattgccatggtggacggaacccag
atcaaccgaaacaacaacttccaaaccttcccacaagctgtgctgctgctcttcaggtgt
gccacgggggaggcctggcaggagatcctgctggactgcagctatgggaagcggtgcgac
cctgagtctgactacgcggagggcgaggagtacacctgtggcacgggctttgcctacttc
tatttcatcagcttctacatgctctgtgcctttctgatcattaacctttttgtggctgtc
atcatggacaactttgactacctcacacgtgactggtccatcctggggccccaccacctg
gatgagttcaaacggatctgggctgagtacgaccctgaagccaagggcaggattaagcac
ttggatgtggtgaccctgctgagacgtatccaacctcccctgggctttgggaagttctgc
cctcaccgtgtagcttgtaagcgcctggtgtgcatgaacatgcccctgaacagcgatggc
actgtcaccttcaatgcaaccctctttgcgctggtgaggacagccctcaaaatcaagaca
gaaggtaactttgaacaggccaatgaggagctcagaaccattatcaaaaaaatctggaag
cgaaccagtatgaagcttttggaccaggtcatcccacctattggagatgatgaggtgaca
gtgggcaaattctatgctactttcctcatccaagagcatttccgaaagttcatgaagcgc
caggaggagtactatgggtaccgtcccaagaagaaccctgtagagatccaggctgggctg
agaagcattgaagaagaagctgctcctgaaattcatcgagccatctctggggacctgact
gctgaggaggagctggagagggcaatggtggaagctgccatggaggaggggatatacagg
aggacgggaggtttgtttggccaggtggacagcttcctggagccgagcagccccctgcag
ccccacgtggccagccagaggcccctgcagttcacagaggtgggcagcgaagacctcgat
tcccccgtcttcctcgacgacttcccccaggaaggcaacaccaatgtcaacaacgccaac
tggcagcaggggttggaatacgaggatgaggtgctgaggagagcagtgcccaggcctcca
gtgcgggagcctgacctccccatccctttggagaggctgcggcggaggcgaggagctgcc
tctgagcatcacccagcatcggggccatccctccatccccagcagggcagcacagtgaca
gcagcagcatccagctcagaacaccgctggcatgaaagcattgacacaaacacatcttct
acccccgccatcaccttcctcattcaagaggctctgatctccggaggcctcgctgctctg
gcccgcgacccatcctttgttgcagtgaccagggatgagatggcagccagcagccagatg
gagatggacgaagtggagaaagctgcagtggagctgctacagggaagagaagcactgcag
gacacagaaatcagctctgctccccgggacaccttggctgcatcagcagtcagcaccccg
gggctcagcgtggccgcatcccatcagaccagctctgctgctcgcctgtga
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integrated database retrieval system
