Gallus gallus (chicken): 396040
Help
Entry
396040 CDS
T01006
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
gga
Gallus gallus (chicken)
Pathway
gga03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
396040 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gga03021
]
396040 (SMARCA2)
03036 Chromosome and associated proteins [BR:
gga03036
]
396040 (SMARCA2)
Transcription machinery [BR:
gga03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
396040 (SMARCA2)
Chromosome and associated proteins [BR:
gga03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
396040 (SMARCA2)
Chromatin remodeling factors
BAF complex
396040 (SMARCA2)
PBAF complex
396040 (SMARCA2)
GBAF(ncBAF) complex
396040 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
396040
NCBI-ProteinID:
NP_990470
CGNC:
7728
Ensembl:
ENSGALG00000010164
UniProt:
Q90755
LinkDB
All DBs
Position
Z:26326600..26448676
Genome browser
AA seq
1568 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHQMPAM
GATDYPQEGMHQMHKSIDGLHEKGMVEDVHCGSMKTMRPPHPGMGPPQSPMDQHSQGYMS
PHPSPLGAPEHVSSPMSGGGPTPPQMTPSQPGPIIPGDPQVMNQPNRGPSPFSPVQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQEPPSAFNRQSGIGMHPMSGAATGP
GPAAGIPGHTAAITSKTWNEGQTPDMSVSSAPQKLPAPSPSGRPSPAPTAAQPAAAMPGP
SVPQPPPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDDEEESSRLEADEKILLDP
NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTL
KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMED
YFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRRED
ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQ
WLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKLT
KQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYR
SLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDEDE
DDEEESESESKSVKVKIKLNKKDEKSREKGKGKKRQSRAKAKPVVSDDDSDEDQDENDQS
EASGSDDE
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcccacagaccctggcgccatgcctcatcctggtccttcccccggaccagga
ccttcacctggaccgattctaggacctagtccaggaccagggccatctcctggctcagtt
cacagcatgatggggccaagtcctggtccacccagtgtccctcatcagatgccagcaatg
ggggctactgattatccacaggaaggcatgcaccaaatgcataagtccattgatggcttg
catgagaaaggaatggttgaagacgttcattgtggctccatgaagactatgcgacctcct
caccctgggatgggcccacctcagagtccaatggaccagcacagccaaggttatatgtct
ccacacccgtctccactaggagcaccagagcatgtgtccagtccaatgtctggaggaggt
ccaactccaccccagatgactcccagccaaccgggacctattatacctggggacccacaa
gttatgaatcaacccaacagaggtccttcccctttcagccctgtacagctgcaccaactt
cgggctcagattctagcatacaaaatgttagctagaggtcagcctttgccagaaaatctc
cagcttgctgttcaggggaaacggacccttcctggtattcaacagcaggagcctcccagt
gccttcaacagacagtctggtattgggatgcatccaatgagtggtgctgcaactggacca
gggcctgctgcaggaatacctggacatacagctgccattacctctaaaacttggaatgaa
ggccaaaccccagatatgagtgtctccagtgcaccgcaaaaacttcctgcaccatctcca
agtgggaggccttctcctgcccctacagctgcccagcctgctgctgctatgcctgggcct
tctgtaccacagccaccacctggacagccttcccccattgttcagctgcagcaaaagcag
aatcgcatcagccctattcaaaagccacaaggattagaccccgttgaaattcttcaagaa
cgtgaatataggcttcaagcacgaattgctcacagaatccaggaactggagaacttgcca
ggttctctgccccctgatctgcgaaccaaagcgacggtggagttgaaggcacttaggtta
ctgaatttccagcgccagttgagacaagaggtagtagcctgtatgcgtcgtgatacaacc
ctggagacggcactgaactccaaggcctataaacgaagcaagcgccagactttgagggag
gcacgtatgactgaaaagcttgagaaacagcagaagatagaacaggagaggaagcgtaga
cagaagcatcaggagtacctgaatagcatattgcagcatgctaaagacttcaaggagtac
catcggtcagtggctggcaagattcagaaactttccaaagctgtggcaacttggcatgcc
aacactgaacgtgagcagaagaaagaaactgagagaattgagaaagaaagaatgaggaga
ctaatggctgaagatgaagaaggctaccgtaagctgattgaccaaaagaaagatagacgc
ctggcctatctgttgcagcagacagacgagtacgttgctaacttgactaatctggtatgg
gaacataaacaggcacaagcagccaaagaaaagaagaagaggaggagaagaaagaagaag
gctgaagagaatgcagaaggcatggcatctggtcttggtcctgatggagagcccatagat
gagagcagccagatgagtgaccttcctgtcaaagtgactcacactgaaacaggcaaagtt
cttcttggtccagaggcaccaaaagcaagtcagctagatgcttggctggaaatgaaccct
ggctatgaagttgctcccaggtcagacagtgaagatgaaagtggttctgaatatgaggag
gaggatgatgaagaagaatcaagcagattagaagcagatgagaagatactcctggatcct
aacagtgaagaagtttctgagaaagatgctaagcaaataattgagacagccaaacaagat
gtggatgatgaatacagtatgcaatatagtgctagagggtctcagtcctactacacagtt
gcacatgcaatcacagaaagggtggaaaagcagtcttctcttctaattaatggcacacta
aaacattatcagcttcagggactggaatggatggtttcactctataataacaatctgaat
gggattttagctgatgaaatgggtctgggaaagacaattcagactatcgcacttatcact
tacttgatggagcacaaaaggctcaatggcccctatctcatcattgttcccctttcgaca
ttatccaactggacatacgaatttgacaaatgggctccttctgtggtgaagatatcttac
aagggtacacctgcaatgcgccgctcacttgttcctcagcttcgaagtggaaaatttaat
gttcttttgactacttatgagtacataataaaggacaaacatatccttgctaagattcga
tggaaatacatgatagtagatgaaggtcatcgaatgaagaatcatcactgcaaactgact
caggtcttgaacactcactatgtggcccctaggcgaattctactgactgggacaccattg
cagaataaattgcctgaactgtgggctcttctcaatttccttctcccaaccatcttcaag
agctgtagcacctttgaacagtggttcaatgctccatttgccatgacaggagaaagggtg
gacttaaatgaagaagaaactattctgatcatccgtcgtctccataaagtactccgaccc
ttcttgctgagaagactgaagaaggaagtagagtctcaactgccagaaaaggtagaatat
gtgatcaaatgtgatatgtctgctctccagaagatcctataccgacacatgcaagccaag
ggaatccttcttacagatggttctgagaaagacaagaagggaaaaggtggcgcaaagact
cttatgaacaccatcatgcaactgagaaagatttgcaatcatccatatatgtttcagcac
attgaggaatcctttgctgaacatttaggctactcaaatggtgtcatcaatggagctgaa
ctttatcgggcctccggaaagtttgagctacttgatcgtattctaccaaagttacgagct
acaaaccatcgtgtgcttcttttctgtcaaatgacatcactcatgaccattatggaagac
tactttgcctttcgaaatttcctgtacttgcgtcttgatggcacaacaaaatcagaagac
agagctgctctcttgaagaagttcaacgagcctgggtcacaatactttatctttttgctg
agtacaagggctggagggctaggcttaaatctccaggctgctgatactgttataatcttt
gatagtgactggaatcctcaccaggacttgcaggcacaagatagagctcaccgaattggc
cagcagaatgaagttcgagttttgcgactgtgcaccgtgaacagcgtggaagagaagatt
cttgctgctgcaaagtataagttgaatgtagatcaaaaagttattcaggctggaatgttt
gatcaaaagtcttcaagtcatgaaaggagggcttttctacaggctatactggagcatgag
gaagaaaatgaggaagaagatgaagttcctgatgatgagactctgaatcagatgattgct
cgacgtgaagaggaatttgatctctttatgcgtatggacatggaccgtcgtagagaagat
gccagaaaccccaagcgcaagccccgcttgatggaggaggatgagttgccatcgtggatt
attaaggatgatgctgaagttgaaaggctcacgtgtgaagaagaggaagaaaagatattt
ggaagaggatcccgtcaacgtagggatgtggactacagtgatgctctcacagagaaacag
tggctgcgggcaatcgaagacggcaatttggaagaaatggaagaggaagtccggcttaaa
aagcggaagagacgaagaaatgtggataaggattctgggaaggaggatggagagaaagca
aagaaaagaagaggcagacctcctgcagagaaattatcacctaacccacccaaactgacg
aaacaaatgaatgccatcattgatacagtgataaactacaaagacagttctgggcggcag
ctaagtgaagtcttcattcagctcccatcgaggaaagaactaccagagtattatgaattg
attaggaaaccagtggacttcaaaaaaattaaggaaagaattcgcaaccataaatatcgg
agtcttggggatctggagaaggatgtcatgttgctgtgtcataatgctcagacattcaat
ctggagggatcacagatctatgaggattctattgttcttcagtctgtgttcaaaagtgca
cgacagaagattgccaaagaagaagaaagtgaggacgaaagcaatgatgatgaagatgag
gatgatgaagaggagtcagagtcagaatcaaaatctgtgaaagtcaaaatcaagctgaat
aagaaggatgaaaaaagtcgggagaaaggaaaaggcaagaagaggcaaagccgagcaaaa
gccaaacctgttgtgagtgatgatgatagtgatgaggatcaagatgaaaatgaccagtcg
gaagcaagcggaagtgatgatgagtga
DBGET
integrated database retrieval system
