Gallus gallus (chicken): 396105
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Entry
396105 CDS
T01006
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gga03000
]
396105 (SOX2)
Transcription factors [BR:
gga03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
396105 (SOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
396105
NCBI-ProteinID:
NP_990519
CGNC:
49650
Ensembl:
ENSGALG00000043460
UniProt:
P48430
LinkDB
All DBs
Position
9:complement(17025524..17026706)
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AA seq
312 aa
AA seq
DB search
MMETELKPPAPQQTSGGGTGNSNSAANNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPK
MHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDKY
TLPGGLLAPGTNTMTTGVGVGATLGAGVNQRMDSYAHMNGWTNGGYGMMQEQLGYPQHPG
LNAHNAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMALGSMGSVVK
TESSSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHYQSAPVPG
TAINGTLPLSHM
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaccgagctgaaacctcccgccccccagcaaacttcggggggaggcacaggc
aactccaactcggccgcgaacaaccagaagaacagcccggaccgggtcaagcgccccatg
aacgccttcatggtgtggtcccgcgggcagcggcggaaaatggcccaggagaacccgaag
atgcacaactcggagatcagcaaacggctcggggccgagtggaaacttttatccgaggcg
gagaagagacccttcattgacgaagccaaacggctccgagctctgcacatgaaggagcac
ccggattataaataccgaccccggaggaaaaccaagaccctgatgaagaaggataagtac
acgttgccagggggcttactggcgccgggcaccaataccatgacgaccggggtaggggtt
ggggccaccttgggagctggggtgaaccagaggatggacagttacgcgcacatgaacggc
tggaccaacggaggctatgggatgatgcaagagcagctcggctacccgcagcacccgggc
ttgaacgcgcacaacgcggcgcagatgcagcccatgcaccgctacgacgtgagcgccctg
cagtacaactccatgaccagctcgcagacgtacatgaacggatcgcctacctacagcatg
tcgtactcccagcaagggaccccgggcatggccctgggctccatgggctcggtggtcaag
acggaatccagctccagtccccccgtagtcacctcctcgtctcattcgagggctccttgc
caagccggggaccttcgggacatgatcagcatgtatctaccaggtgctgaagtaccagaa
ccagctgccccaagcagacttcatatgtcccaacactaccagagtgcacctgttcctggc
acagccattaatggcacactccctctatcacatatgtaa
DBGET
integrated database retrieval system
