Gallus gallus (chicken): 396213 Help Entry 396213            CDS       T01006                                  Symbol TNR Name (RefSeq) tenascin-R precursor   KO K06252   tenascin Organism gga  Gallus gallus (chicken) Pathway gga04510   Focal adhesion gga04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:gga00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     396213 (TNR)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     396213 (TNR)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:gga00536]     396213 (TNR) Glycosaminoglycan binding proteins [BR:gga00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    396213 (TNR) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  fn3 Fibrinogen_C EGF_TEN Ig_DSCAM-DSCAML_C EGF_Tenascin EGF_Teneurin Pur_ac_phosph_N Fn3_Dep-1_2nd FN3_Tor_3rd EGF_2 DUF4998 Big_5 Lzipper-MIP1 Motif Other DBs NCBI-GeneID:  396213 NCBI-ProteinID:  NP_990607 CGNC:  3344 Ensembl:  ENSGALG00000004526 UniProt:  Q00546 LinkDB All DBs Position 8:7386926..7439538 Genome browser AA seq 1353 aa AA seqDB search MGTDSENPVLRNVLISFNLLLLGAVLKPFECRLEVTTEPAERPAVDEEGGLANCSPPVKE QPMVFHHIYNINVPVDSCCSSMLRSSAEEVSSEDDRLAEYTEQTSDSESQVTFTHRINLP KQACKCSTSLPSLQELLSRIEMLEREVSMLRDQCNSNCCQENAATGRLDYTLPCSGHGNF SLESCRCICSEGWAGSNCSEPRCPRGCSSRGVCLEGQCVCDNDYGGEDCSQLRCPAGCGS RGLCVDGECICEEGFGGEDCSQPRCPRDCSGRGHCDNGTCVCAEGYAGEDCGWLRCPNAC SGRGVCQDGLCICEDGYGGQDCSAVAPPENLRVTGISDGSIELAWDSPGAATEYVVSYQP AGPGGSQLQQRVPGDWSTITITELEPGVAYNVSIYAVISDVLSSPVTTKVTTNLATPQGL KFKTITETTVEVQWEPFSFPFDGWEISFIPKNNEGGVIAQLPSTVTTFNQTGLKPGEEYT VTVVALKDQARSPPASDSISTLIDGPTQILVRDVSDTVAFVEWTPPRARVDAILLKYGLA DGEGGRTTFRLQPPLSQYSLQALRPGARYHLAVSALRGANESQPALAQFTTEIDAPKNLR VGSRTPASLELTWDNSEAEAHSYRVVYSTLAGEHYHEVLVPRDTGPTTRATLADLVPGTE YGIGISAVMDSQQSVPATMNARTELDSPRDLLVTASTETSISLSWTKAMGPIDHYRVTFT PASGMASEVTVSRNESQLTLSELEPGTEYTISIIAERGRQQSLEATVDAFTGVRPITQLH FSQLTSSSVNITWSDPSPPADRLVLTYSPRDEEAAQQLALDGTRRHASLTGLRPSTEYLV SLVAVHGAVSSEPVTGSITTGMDAPKDLRVGNITQDSMVIYWSPPVAPFDHYRISYRAAE GRTDSTAIGNDATEYIMRLLQPATKYEIGVKSVRGREESEVASITTYTAMDAPLGVTATN ITPTEALLQWNPPLMDVESYVLVLTRHTGETILVDGINQEYQLTNLQPSTTYTVAMYATN GPLTSQTISTNFTTLLDPPTNLTASEVTRRSALLSWVPPVGDIENYILTYRSTDGSRKEL IVDAEDTWIRLEGLSETTQYTVRLQAAQNAMRSGFISTTFTTGGRVFANPQDCAQHLMNG DTLSGVYTISINGDLSQRVQVFCDMSTDGGGWIVFQRRQNGLTDFFRKWADYRVGFGNLE DEFWLGLDNIHKITSQGRYELRIDMRDGQEAAYAYYDKFSVGDSRSLYKLRIGDYNGTSG DSLTYHQGRPFSTKDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQGINWYH WKGHEFSIPFVEMKMRPYNHRNISGRKRRSLQL NT seq 4062 nt NT seq  +upstreamnt  +downstreamnt atggggactgacagtgaaaacccagtcctgagaaatgtgctcatcagcttcaacttgctg ctgctgggtgctgtcctgaagccgttcgagtgccggctggaggtgacaacagagccagcc gagaggccggcagtggatgaggaggggggcctggccaactgcagcccacccgtcaaagag cagcccatggtcttccaccacatctacaacatcaacgtccccgtggacagctgctgctcc tccatgctcaggtcttcggctgaggaggtgagttcagaagacgacaggctggcggagtac acggagcagacctctgacagcgagagccaggtcaccttcacccacaggataaacttgccc aagcaggcctgtaagtgctccacctccctcccgtccctgcaggagctgctgagcaggatt gagatgctggagagggaggtctccatgctccgggaccaatgcaactccaattgctgccaa gaaaatgcagccacaggacgcctggattacaccttaccatgcagcggccacgggaacttc agcctggagtcgtgccgttgcatctgcagtgagggctgggcgggcagcaactgctcagag ccgcgctgcccacggggctgctccagccgtggggtctgcctggagggtcagtgcgtctgc gacaatgactacggcggtgaggactgctcccagctccgctgccccgccggctgcggctcc cgcgggctctgcgtggatggagaatgcatctgcgaggagggctttggtggggaggactgc tctcagccccgctgcccccgtgattgctcgggaaggggacactgtgacaacggcacctgt gtgtgcgccgagggctatgctggggaggactgcgggtggctgcggtgtcccaacgcctgc agcggacgaggcgtctgccaggatggcctctgcatctgcgaggacggctacggagggcag gactgctcggcagtggctcctcctgaaaacctgcgtgtgacagggatcagcgatggctcc attgagctagcatgggacagcccaggagcagccactgagtacgtggtatcataccagcca gcggggccagggggatcccagctccagcagcgggtgcctggggactggagcaccatcacc atcacggagctggagccaggtgttgcctacaatgtcagcatctacgcagtcatcagcgat gtcttgagcagccctgtcaccaccaaggtgacaaccaacttggccacgccgcaggggctg aagttcaagaccatcacagagacgaccgtggaggtgcagtgggagcccttctccttccct tttgatggctgggagatcagcttcatccccaagaacaacgagggtggtgtgattgcccag ctccccagcaccgtcaccaccttcaaccagacggggctgaagccaggcgaggagtacact gtcaccgtggtggctctgaaggaccaagccaggagccccccagcctctgacagcatctcc accctcatcgacggtccaacgcagatcctggtgcgggatgtctccgacacggtggccttt gtggagtggacgccgccgcgcgcccgggtggacgccatcctgctgaagtacgggctggcg gacggggagggcgggaggaccaccttccgcctgcagccccccctcagccagtactccctg caggccctgcggcccggcgcccgctaccacctcgctgtcagcgccctccggggtgccaac gagagccagccggccctcgcccagttcaccacagagattgatgcccccaagaacctacgg gtgggctcacggacccctgccagccttgagctcacctgggacaacagcgaggcagaggca cacagctacagggtggtctacagcaccctggctggagagcactaccacgaggttctggtg ccacgggacactggccccaccacccgggccactcttgcagatctggtgccagggacagaa tatggcattgggatttcggctgtgatggacagccagcagagcgtgccagcaaccatgaat gccaggaccgagcttgatagcccccgggacctcctggtgacagcttccacagagacatcc atctcactgtcctggaccaaagccatgggtcccattgaccactaccgtgtcaccttcacc cctgcctcagggatggcctctgaggtgacagtgtcccgtaacgagtcgcagctcactctc tctgagctggagccagggacagagtataccatctccatcatcgctgagaggggacgtcag cagagcctggaagccaccgtggatgctttcacaggggtccggcccatcacgcagctgcac ttctcccagctgacgtcctcgagtgtgaacatcacatggagtgacccatccccacctgca gaccgcctggtcctcacctacagcccccgggatgaggaggctgcacagcagctggcactt gatggcacccgcaggcatgccagcctgacaggtctgcggccatccaccgagtacctggtg tccctggtggctgtccatggtgcagtcagctctgagcctgtcacgggctccatcacaaca gggatggatgcaccaaaggacctcagagtgggcaacatcacgcaggactccatggtcatc tactggagccctcctgttgctccctttgatcactacagaatatcctaccgtgctgctgaa gggaggacagacagcacggccattggcaatgatgccaccgagtacatcatgcgccttctg cagcctgccaccaagtatgagatcggagtgaagagcgtgcggggccgggaggagagtgag gtggcctccatcaccacatacacagccatggatgccccgctgggtgtcactgccaccaac atcacccccactgaggcactgctgcagtggaaccccccgctgatggatgtggagagctac gtcctcgtcctcacccgccacacaggagaaacaattctggtggatggaatcaaccaggag taccagctgaccaaccttcagcccagcaccacctacacggtcgccatgtatgccaccaac gggcccctcaccagccagactatcagcaccaacttcacaacccttttggatcctccaaca aacctgactgcgagtgaggtcacccgacggagtgcactgctctcctgggtgcctcccgtg ggagacatcgagaactacatcctgacctacagatcaactgatggaagtcgcaaggagctg atcgtggatgctgaggacacatggatccgcctggagggtctttctgagaccactcagtac accgtgcgcctgcaggctgcccaaaacgccatgcggagcggcttcatctccaccaccttc accacaggtggccgtgtctttgccaaccctcaggactgtgcccagcacttgatgaacgga gacacgctgagcggtgtctacaccatctccatcaacggggacctcagccagcgggtgcag gtgttctgtgacatgagcacagacggcggtggctggattgtcttccaaaggcggcagaat gggctgaccgacttcttccgaaaatgggcagattaccgggttggctttgggaacttggag gacgagttttggctgggcttggacaacatccacaagatcacatcgcagggacgctacgag ctgcgcatagacatgagggatggccaggaagcagcatatgcctactatgacaaattctct gttggcgactcccggagcctctacaagctccggataggagactacaatggcacttctggg gactccctcacctatcaccagggccgccccttttccaccaaggacagggacaacgacgtg gccgtgaccaactgcgccatgtcctacaagggggcctggtggtataagaactgccaccgg accaacctcaacggcaagtatggagagtcccggcacagtcagggaattaactggtaccat tggaaaggccatgagttctccatcccctttgtggaaatgaagatgcgaccttacaaccac cgtaacatctctgggaggaagcgacggtccctacagctctga

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