Gallus gallus (chicken): 396381
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Entry
396381 CDS
T01006
Symbol
LHX1, LIM-1
Name
(RefSeq) LIM/homeobox protein Lhx1
KO
K09372
LIM homeobox protein 1
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gga03000
]
396381 (LHX1)
Transcription factors [BR:
gga03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
396381 (LHX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
SpoIIIAH
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
396381
NCBI-ProteinID:
NP_001384288
CGNC:
4028
Ensembl:
ENSGALG00000005409
UniProt:
F1NX79
LinkDB
All DBs
Position
19:8872998..8878023
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AA seq
406 aa
AA seq
DB search
MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG
TKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLN
NSNTAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKETGSNENDDQNLGAKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLVDRLEPGELLPNGPFSFYGDYQSEYYGPGGNYEFFPQGP
PSSQAQTPVELPFGAAGGPPGTPLGALEHPLPGHHPPGEAQRFPDMLAHPAGDSPSPEPT
LPGSLHSMSAEVFGPSPPFSSISVNGGANYGNHLSHPPEMNEAAVW
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggttcactgtgcgggctgcaaaaggccaatcttggaccggttcttgttgaatgtactg
gacagggcttggcatgtgaagtgtgttcagtgctgtgaatgtaaatgcaatttgacagag
aaatgcttttcgcgagaaggcaagctttactgcaaaaacgacttctttcggtgtttcggg
accaagtgtgcgggctgtgcccagggcatctcccccagcgacctggtccgcagggcgcgg
agcaaagtgttccacttgaactgttttacgtgtatgatgtgcaacaagcagctctccacc
ggcgaggagctctatatcatagacgaaaacaagttcgtctgcaaagaagattacctaaat
aacagcaatactgccaaagaaaacagcctgcattcagctaccaccggcagtgaccccagc
ctgtcccccgactcccaagacccctcccaggacgacgccaaggactcggaaagcgccaac
gtgtccgacaaggagacgggcagcaacgagaacgacgaccagaacctgggggccaagcgg
cgggggccccgcaccaccatcaaagccaaacagctagagactctgaaggccgccttcgcg
gccacccccaaacccacgcggcacatcagggagcagctggcgcaggagaccggcctcaac
atgcgcgtcatccaggtgtggttccagaaccgccgctccaaggagcgccgcatgaagcag
ctgagcgcgctgggcgcccgccggcacgccttcttccgcagcccgcgcaggatgcggccg
ctggtggaccgcctggagcccggcgagctgctccccaacgggcccttctccttctacgga
gattaccagagcgagtactacggccccgggggcaactacgagttcttcccgcaaggcccg
ccctcctcgcaggcgcagacgccggtggagctgccgttcggggcggcgggcggaccgccg
ggcacgccgctgggcgcgttggagcacccgctgcccgggcaccacccgcccggagaggcg
cagcgcttccccgacatgctggcgcaccccgccggggactcgcccagccccgagcccacc
ctgcccggctccctgcactccatgtccgcggaagtgttcggccccagtcctccgttctcc
tcgatatccgtcaacggcggtgctaactacggcaatcacttgtcacacccaccagaaatg
aacgaagcggctgtgtggtag
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