Gallus gallus (chicken): 396440
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Entry
396440 CDS
T01006
Symbol
TNC
Name
(RefSeq) tenascin precursor
KO
K06252
tenascin
Organism
gga
Gallus gallus (chicken)
Pathway
gga04510
Focal adhesion
gga04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
396440 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
396440 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gga00536
]
396440 (TNC)
Glycosaminoglycan binding proteins [BR:
gga00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
396440 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_2
EGF_Tenascin
Pur_ac_phosph_N
EGF
NDNF
hEGF
DUF4998
Tor_FN3_3nd
Filamin
Big_5
Motif
Other DBs
NCBI-GeneID:
396440
NCBI-ProteinID:
NP_990787
CGNC:
49806
Ensembl:
ENSGALG00000039990
LinkDB
All DBs
Position
17:complement(3013995..3080707)
Genome browser
AA seq
1808 aa
AA seq
DB search
MGLPSQVLACAILGLLYQHASGGLIKRIIRQKRETGLNVTLPEDNQPVVFNHVYNIKLPV
GSLCSVDLDTASGDADLKAEIEPVKNYEEHTVNEGNQIVFTHRINIPRRACGCAAAPDIK
DLLSRLEELEGLVSSLREQCASGAGCCPNSQTAEGRLDTAPYCSGHGNYSTEICGCVCEP
GWKGPNCSEPACPRNCLNRGLCVRGKCICEEGFTGEDCSQAACPSDCNDQGKCVDGVCVC
FEGYTGPDCGEELCPHGCGIHGRCVGGRCVCHEGFTGEDCNEPLCPNNCHNRGRCVDNEC
VCDEGYTGEDCGELICPNDCFDRGRCINGTCFCEEGYTGEDCGELTCPNNCNGNGRCENG
LCVCHEGFVGDDCSQKRCPKDCNNRGRCVDGRCVCHEGYLGEDCGELRCPNDCHNRGRCV
NGQCVCDEGFIGEDCGELRCPNDCHNRGRCVNGQCECHEGFIGEDCGELRCPNDCNSHGR
CVNGQCVCDEGYTGEDCGELRCPNDCHNRGRCVEGRCVCDNGFMGEDCGELSCPNDCHQH
GRCVDGRCVCHEDFTGEDCRERSCPNDCNNVGRCVEGRCVCEEGYMGIDCSDVSPPTELT
VTNVTDKTVNLEWKHENLVNEYLVTYVPTSSGGLDLQFTVPGNQTSATIHELEPGVEYFI
RVFAILKNKKSIPVSARVATYLPAPEGLKFKSVRETSVQVEWDPLSISFDGWELVFRNMQ
KKDDNGDITSSLKRPETSYMQPGLAPGQQYNVSLHIVKNNTRGPGLSRVITTKLDAPSQI
EAKDVTDTTALITWSKPLAEIEGIELTYGPKDVPGDRTTIDLSEDENQYSIGNLRPHTEY
EVILISRRGDMESDPAKEVFVTDLDAPRNLKRVSQTDNSITLEWKNSHANIDNYRIKFAP
ISGGDHTELTVPKGNQATTRATLTGLRPGTEYGIGVTAVRQDRESAPATINAGTDLDNPK
DLEVSDPTETTLSLRWRRPVAKFDRYRLTYVSPSGKKNEVEIPVDSTSFILRGLDAGTEY
TISLVAEKGRHKSKPTTIKGSTEEEPELGNLSVSETGWDGFQLTWTAADGAYENFVIQVQ
QSDNPEETWNITVPGVQHSVNVTGLKANTPYNVTLYGVIRGYRTKPLYVETTTGAHPEVG
ELTVSDITPESFNLSWTTTSGDFDAFTIEIIDSNRLLEPMEFNISGNSRTAHISGLSPST
DFIVYLYGISHGFRTQAISAAATTEAEPEVDNLLVSDATPDGFRLSWTADDGVFDSFVLK
IRDTKRKSDPLELIVPGHERTHDITGLKEGTEYEIELYGVSSGRRSQPINSVATTVVGSP
KGISFSDITENSATVSWTPPRSRVDSYRVSYVPITGGTPNVVTVDGSKTRTKLVKLVPGV
DYNVNIISVKGFEESEPISGILKTALDSPSGLVVMNITDSEALATWQPAIAAVDNYIVSY
SSEDEPEVTQMVSGNTVEYDLNGLRPATEYTLRVHAVKDAQKSETLSTQFTTGLDAPKDL
SATEVQSETAVITWRPPRAPVTDYLLTYESIDGRVKEVILDPETTSYTLTELSPSTQYTV
KLQALSRSMRSKMIQTVFTTTGLLYPYPKDCSQALLNGEVTSGLYTIYLNGDRTQPLQVF
CDMAEDGGGWIVFLRRQNGKEDFYRNWKNYVAGFGDPKDEFWIGLENLHKISSQGQYELR
VDLRDRGETAYAVYDKFSVGDAKTRYRLRVDGYSGTAGDSMTYHNGRSFSTFDKDNDSAI
TNCALSYKGAFWYKNCHRVNLMGRYGDNNHSQGVNWFHWKGHEYSIQFAEMKLRPSSFRN
LEGRRKRA
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgggactcccttcccaggttttggcctgtgccatcttaggtttgctgtaccagcatgcc
agtggtgggctcatcaagcgaattatccggcagaagcgggagactgggctcaatgtgacc
ttaccagaggataatcagcctgtggttttcaatcatgtctacaacatcaagctgcctgtt
ggctccctttgctctgtggacctggacacagcaagtggggacgcagacctgaaggcagaa
attgagcctgtcaagaattacgaggagcatacggtgaatgaggggaaccagattgtcttc
acgcaccgcatcaacattccccgccgggcctgtggctgtgcggctgccccagacatcaag
gacctgctgagcagactggaggagctggaggggctggtatcctccctccgggagcagtgt
gccagcggggctggatgctgtcctaattcccagacagcagaaggtcgcctggacacggcc
ccctattgcagtgggcacggcaactacagcaccgagatctgtggctgcgtgtgcgagcca
ggctggaaaggccccaactgctccgaaccggcctgcccacgcaactgcctcaaccgcggc
ctctgcgtgcggggcaaatgcatctgcgaggagggctttaccggcgaggactgcagccag
gctgcctgcccgtctgactgcaacgaccaaggcaagtgtgtggatggggtgtgcgtctgc
ttcgagggctacacgggcccggactgcggcgaggagctctgcccccacgggtgtggcatt
cacgggcgctgtgtgggtggacgctgtgtgtgccacgagggcttcactggcgaggactgc
aatgagcctctgtgccccaacaactgtcacaaccgcgggcgctgtgtggacaacgagtgc
gtctgcgatgagggctacacgggagaggactgcggcgagctgatttgccccaatgactgc
tttgaccgcgggcgctgcatcaatgggacctgcttctgcgaggagggctacactggagag
gactgcggcgagctgacctgccccaacaactgcaacggcaacgggcgctgtgagaacggg
ctgtgtgtgtgccatgagggcttcgtgggggatgactgcagccagaagaggtgcccgaag
gactgcaataaccgcgggcgctgcgtggatgggcgctgtgtgtgccatgaggggtacctg
ggggaggactgtggggagctgcggtgccccaacgactgccacaaccgcgggcgctgcgtc
aacgggcagtgtgtgtgtgatgagggattcattggggaggactgtggagagctgcggtgc
cccaacgactgccacaaccgcgggcgctgcgtcaatgggcagtgcgagtgccacgaggga
ttcatcggggaggactgcggggagctgcggtgtcccaacgactgcaacagccatgggcgc
tgtgtcaatgggcagtgcgtgtgtgatgaggggtacacaggggaggactgcggggagttg
cggtgccccaacgactgccacaaccgcgggcgctgcgtggagggacgctgtgtgtgtgac
aacggcttcatgggggaggactgcggggagctgtcctgtcccaatgactgccaccagcac
gggcgctgcgtcgatgggcgctgcgtgtgccatgaggacttcactggggaagactgccgg
gaacggtcctgccccaatgactgcaacaacgtgggccgctgtgtcgagggacggtgtgtc
tgtgaggaaggttacatggggatcgactgttctgatgtgtctcctccaacagagctgact
gtaacgaatgtaacagataaaacggtaaatctggaatggaagcatgagaatctcgtcaat
gagtaccttgtcacctatgtccctaccagcagtggtggcttagatctacagttcaccgta
ccaggaaaccagacatctgccactattcatgagctggagcctggtgtggaatacttcatc
cgtgtctttgcaatccttaaaaacaagaaaagtattccagtcagtgccagagtagcgaca
tatttgcctgctccagaaggtctgaaattcaaatctgttagagaaacgtctgtccaggtg
gaatgggatcctctgagcatttcctttgatggctgggagctggtctttcgtaatatgcag
aaaaaggatgataatggagacataaccagcagcttgaaaaggccggagacatcatatatg
cagccaggattggcaccaggacaacagtataatgtatcccttcatatagtgaaaaacaat
accagaggaccagggctatcccgagtgataaccacaaaactcgatgcccctagccagatt
gaagcgaaagatgtcacagacaccacagctctgatcacatggtccaaacccttggctgaa
attgaaggcatagagctcacatatggccccaaggatgttccaggggacaggactaccatt
gacctctctgaggatgaaaaccaatattctattggaaacctgaggccacacacagaatat
gaagtgatactcatttctcggcgaggggacatggagagtgaccctgcaaaagaagtcttt
gtcacagacttggatgctccacgaaacctgaagcgagtgtcacagacagacaacagcatt
actttggagtggaagaacagccatgcaaatattgataattaccgaattaagtttgctccc
atttctggtggagaccacactgagctgacagtgccaaagggcaaccaagcaacaaccaga
gctacactcacaggtttgagacctggaactgaatatggcattggagtgacagcagtgaga
caggacagggaaagtgctcctgctaccattaatgctggcactgatcttgataaccccaag
gacttggaagtcagtgaccccactgaaaccaccctgtcccttcgctggagaagaccagtg
gccaaatttgatcgttaccgcctcacttacgttagcccctctggaaagaagaacgaagtg
gagatccctgtggacagtacctcttttatcctgagaggattagacgcagggacggagtac
accatcagtctagtggcagagaagggcagacacaaaagcaaacccacaaccatcaagggt
tcgactgaggaagaacctgagcttggaaacttatcagtgtcagagactggctgggatggt
ttccagctcacctggacagcagccgacggggcctatgagaactttgtcattcaggtgcag
cagtctgacaatccagaagaaacctggaacattacagtccccggcgtacagcactctgtg
aacgttacaggcctcaaggccaacacaccttataacgtcacactttatggtgtgattcga
ggctacagaaccaaacccctttatgttgaaaccacgacaggagcacaccctgaagttggt
gagctaaccgtttccgacattactcctgaaagcttcaacctttcttggacgaccaccagc
ggggactttgacgcctttactattgaaattattgattctaacaggttgctggagcccatg
gagttcaacatctcaggcaattcaagaacagctcatatctcagggctttcccccagcact
gattttattgtctacctctatgggatctctcatggtttccgcacacaggcaataagtgct
gcggctacaacagaggcagaacccgaggtggacaaccttctggtttcagatgctacccct
gacggcttccgtctgtcctggactgcagatgatggggttttcgacagttttgttctaaaa
atcagggataccaaaaggaaatctgatccactggaactcatagtaccaggccatgagcgc
acccatgatataacagggctgaaagagggcactgagtatgaaattgagctctatggagtt
agcagtggacggcgctcccaacccataaattcagtagcaaccacagttgtgggatctccc
aagggaatctctttctcggacatcacagaaaactctgctacagtcagctggacgcccccc
cgcagccgtgtggatagctacagggtctcctatgtccccatcacaggcggcactcccaat
gttgttacagttgatggaagcaagacaaggacaaagctggtgaagttagtcccaggtgta
gactacaacgttaatatcatctctgtgaaaggctttgaagaaagcgaacccatttctgga
attctgaaaacagctctggacagcccgtcaggactggtagtgatgaacattacagactcg
gaggctctggcaacctggcagcctgcaattgcagctgtggataattacattgtctcctac
tcttctgaggatgagccagaagttacacagatggtatcaggaaacacagtggagtacgac
ctgaatggccttcgacctgcgacagagtacaccctgagggtgcatgcagtgaaggatgcg
cagaagagcgagaccctctccacccagttcactacaggactcgatgctccaaaagattta
agtgctaccgaggttcagtcagaaacagctgtgataacgtggaggcctccacgtgctcct
gtcactgattacctcctgacctacgagtccattgatggcagagtcaaggaagtcatccta
gaccctgagacgacctcctacaccctgacagagctgagcccatccactcaatacacagtg
aaacttcaggcactgagcagatctatgaggagcaaaatgatccagactgttttcaccaca
actggtcttctttatccttatcctaaagactgctcccaagctctcctgaatggagaggtc
acctctgggctctacactatttatctgaatggagacaggacacagcctctgcaagtcttc
tgtgacatggctgaagatggaggtggatggattgtgttcctgaggcgtcaaaatggaaag
gaagatttctacaggaactggaagaattacgtggccggctttggagatcccaaggatgaa
ttctggataggtctggagaacctccacaaaatcagctctcaggggcagtacgagctgcgt
gtggatctgagagacagaggtgagacagcctatgctgtgtacgacaagttcagcgttgga
gatgccaagacccggtaccggctgagggtggatggctacagtggcacagcaggtgactcc
atgacctaccataatggaagatccttctccacttttgacaaggacaatgattctgctatc
accaactgtgctttgtcatacaagggtgctttctggtacaagaattgtcaccgagtcaat
ctgatgggcagatatggtgacaacaaccacagtcagggtgttaattggttccactggaag
ggccacgaatactccatccagtttgcagagatgaaactgagaccctccagctttcggaat
ctggaaggaagacgaaagcgagcataa
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integrated database retrieval system