Gallus gallus (chicken): 396503 Help Entry 396503            CDS       T01006                                  Symbol COL17A1 Name (RefSeq) collagen alpha-1(XVII) chain   KO K07603   collagen type XVII alpha Organism gga  Gallus gallus (chicken) Pathway gga04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:gga00001]  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     396503 (COL17A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen DUF2868 Motif Other DBs NCBI-GeneID:  396503 NCBI-ProteinID:  NP_001292131 CGNC:  6309 Ensembl:  ENSGALG00000029617 UniProt:  Q90584 A0A8V0ZPX4 LinkDB All DBs Position 6:complement(25087345..25127305) Genome browser AA seq 1510 aa AA seqDB search MDSVTKKTRQDGSEVTERLITETVTTRLTSLPPKGGSSSGLKTSSHTGGSGVEKRSYTHS SGYVTSSGSGRLNSSSSGYRQTQSPSSTLTKSPGSTFERKTYVNRHATYEGSSSANSSPE FPRKEFASASTRGRSQSRESEIRVRLQSASPSGRWTELDDVKRLLKGSRSASCSPTRSSS STLPIPKKAVVETKMVTESSQSVSGTYDTTILNTTLPPYTWSSTLPAGSSLGGYHNSMGQ SSSLINAMSHSTGSVFGVPNNLAPSSHALNTGLSTSSTVFGVQNNLSPSSSALNASAASA AYGMKNTSQTNTMNSTGVSASAGGTILSSQGDDFLHKDCKFLLLEKENAPAKKEMELLVM TKDSGKVFSASSTGLNGGSFAEDTLKKEKQGLSSYAADTGLKSDANGGLKSAPTRDKATY AEIQNGGAGGAIGSAPSWCPCGSCCSWWKWLLGLLLAWLLLLGLLFGLIALAEEVRKLKS RVDNLEKINHSFLTVNQGNPYLEKDVSKVDFLHGVAPSSTFPFENEESVWLMVKSRLNKE IERGYFRGERGEPGMKGDMGLQGPKGDRGLPGVPGIPGPVGHQGPEGPKGQKGSMGDPGM EGPMGQRGREGLPGPRGEPGPPGFGEKGDRGPAGPPGPPGPPGSAGLKGPMGSPGPQGPP GPPGLQGFRGEAGLPGAKGEKGATGPPGPKGDQGEKGAHGMTGEQGSRGIPGPPGEPGAK GPAGQAGRDGQPGERGEPGLMGIPGARGPPGPSGDTGEPGLTGPQGPPGLPGNPGRPGAK GEPGAPGKVISAEGSSTIALPGPPGPPGPIGPTGPPGVPGPVGPAGLPGQQGPRGEKGSA VEVVIETIKTEVSSLASQMLSDLQGRAGPPGPPGPPGESVQGLPGPRGPPGLPGPSGPPG RPGSSVSTSETFVSGPPGPPGPPGPKGDQGEPGPRGFTGEPGEPGLPGFSSHGGTVTMQG PPGPPGPPGPKGDAGVPGAPGIPGTSRGGSRQIQGPPGPPGPPGPPGPGGSSSQEIQQYV ADYLKSDNVRHYLTGVQGPPGPPGPPGILTTADGKNFDFAELATRVMSYVTSSSDHYQSF ASSVSTTSVLYQELLNMLQREEIRQYLVGPRGPPGPPGPGVDGMSLSLDYDELTRRFISY LTSSGMSIGLPGPPGPPGTPGISYSELTAYLRNSEFSGLVGPPGPAGPPGPPGIPGSSGT SLEDISAYLQSVGYSSISGIQGPPGPPGPPGPPGFSGTGLLSYADITHSDEFRSELIQYL KSDEVRSYISGPPGSPGPPGPPGPKGDSGLVAGSMSSLYHDSLASERLHGGSIGAEGSHG GSLGATSSYGSSMSSSMSSYSASMGSDGSYGASVGSDGSFDGLLTAEESHRRSAGPGRSY SSSFTGSLDYNELARHVSENLQSRGILQDLMSYTGQGPPGPPGPPGPPGISRVFAAYGNV TEDLMDFFRTHGTVRGPPGEKGERGYPGPKGDPGPMGPPGRHGQRGPKGEKGEKGEQMYS GRRRRRSVGV NT seq 4533 nt NT seq  +upstreamnt  +downstreamnt atggattctgtaacaaagaaaacgaggcaagatggatcagaagttacagagaggcttatt acagagacagtaacaacaagactgacatctttaccacccaaaggagggagcagtagtgga ctcaagacatcgtcccacactggaggaagtggagttgaaaagaggtcttacacccatagc agtggctatgtgacttcaagtggaagtggtagattgaattcatcatcgtctggctacaga caaacacagtctcctagctcaactctcaccaaatcacctggctcaacatttgaaagaaaa acctatgtcaaccgccatgcgacatatgaagggagctccagtgctaactcttctccagag ttccccaggaaagagtttgcatctgcctccacacgagggcgaagccaaagtcgagagagt gaaatacgagtccggctgcagagcgcatctccctccggcaggtggacggagttggatgat gtaaagcgcttactgaaagggagtcgatcagccagctgcagtcctactcgatcatcatcc agtacactcccaataccgaaaaaagctgtggtggagacaaaaatggttactgagagctct cagtcagtgtcagggacatatgatacaactatactaaataccaccctccctccatacacg tggtcctcaactctgcctgctggatcttcccttggagggtaccataacagcatgggccag agctcttccttgatcaatgctatgtctcattctacaggatcagtttttggtgttccaaat aacctggctcctagcagtcatgctctgaacacaggcctgagcacttcctcaacagtgttt ggagttcaaaacaatctgtcaccaagttcttcagccctgaatgccagtgcagcctctgca gcatatgggatgaagaacacttctcagacaaacaccatgaatagtactggtgtgtctgcc tcggcaggtggaaccattttgagctcgcagggagatgactttctgcacaaagactgcaag ttcctgctgctagagaaagaaaatgccccagcaaagaaggagatggagctcctagtcatg acaaaggatagtggcaaagtctttagtgcctcttccactggacttaatggaggatccttt gcagaagacaccttgaagaaagaaaagcaggggctttcctcttacgcggcagatactggc ctgaaatcagatgcaaatggagggttgaaatcagcgccaacaagggacaaagcaacatat gcagaaatacaaaatggtggtgcagggggtgcaattggatcagcaccatcctggtgtccc tgtggctcctgctgtagctggtggaaatggctcctgggtttgcttctggcgtggttgctt ctccttggattactctttggactcattgctctggcggaagaagtgagaaagctgaaatct cgtgtggacaacctggaaaaaataaatcacagcttcctgacagttaaccaagggaatcca tatttagaaaaagacgtttctaaagtggacttccttcatggtgtggcaccatcttcgacc ttcccttttgaaaatgaagaatcagtttggttgatggtgaagagcagactgaacaaggaa atcgaacgaggctacttccgaggagagagaggagaacctggtatgaaaggtgacatgggg ttgcaaggtcccaaaggggatcgaggacttcccggtgtcccaggcattcctggtccagtg gggcaccaaggaccagaaggaccgaaagggcagaagggcagcatgggtgatcctggcatg gaaggtcctatgggacaaagaggtcgagaagggctaccagggcctcgaggagagcctgga ccacctggatttggagaaaaaggagacagaggtcctgcaggtcctccagggccacctggt cccccaggttctgctggccttaaaggtccaatgggttctccaggcccccagggtcctcca ggtcctcctggccttcaaggatttagaggagaagcaggtctcccaggtgctaaaggtgag aagggcgctactggacccccaggacccaaaggtgatcagggtgagaaaggagctcatgga atgacaggtgaacaaggctcgagaggcatacctggtcctccaggagagccaggggctaaa ggacctgcaggacaagctggccgtgatggacagccaggtgaaagaggtgaaccaggtctc atgggaatcccaggagcccgaggccctccaggtccttctggagatacaggagagccaggt ctcacaggaccccaaggaccaccaggacttccaggcaacccaggcagaccaggggctaaa ggagaacctggagctccaggcaaagtcataagtgctgagggttcatcaactattgctctg ccaggcccaccaggtcctccaggaccaattggccccactggaccccctggagttccaggt cctgttgggccagctggtctccctggacaacaaggtccacggggtgagaagggatccgca gttgaagttgtgatagaaactatcaagacagaagtctcatcactggcatctcagatgctg tcagatctacaagggcgagcaggaccaccaggtccccctggaccaccaggtgaatctgtg cagggactccctgggcctcgtggtcccccaggattgccaggaccttcaggcccaccaggg agaccaggatcttcagtatccacctcagaaacatttgtctccggtccaccgggtccacca ggtccaccaggaccgaagggagaccaaggcgaaccaggtccacgaggattcacaggtgaa ccaggtgaacctggccttccaggattctcttcccatggtggtacagtcaccatgcaagga cctccaggcccaccaggcccaccaggacctaaaggtgatgcaggtgtcccaggtgctcct ggcatcccaggaacatctcgaggtggatccagacaaattcagggacccccgggtcctcct gggccgcctggtcctcctggcccaggtggaagttcctctcaagagattcagcagtatgtc gctgattacctgaaaagtgataacgtaaggcattatttgactggtgtccaaggtcctcca ggccctccaggcccacctggaatcctcaccactgcagatgggaagaactttgattttgca gagctggctacccgtgttatgagctatgtgacaagctcttcagatcattatcagtcattt gccagttcagtatcaactacatctgttttgtaccaagagcttttgaacatgctgcagaga gaagaaattcgtcaatatctagttggacctcggggcccaccaggacctcctggaccagga gtagatggaatgtctctgtcactggattatgatgagttgaccagacggtttattagctac ttgacaagttctggtatgagcattgggctccctggaccgcctgggcctccgggaacacca ggcatatcttacagtgaactgacagcatacctgagaaactctgaattcagtggtcttgtt ggaccccctggtcctgcagggcccccaggacctccagggatccctggatcatctggcacc tctctggaggacatctctgcttacctacaaagtgttggatactcttctatctctggcatc cagggcccacctggccctcctggccctcctggaccaccaggcttctcaggaaccggcctc ttgtcctatgctgacatcacccacagtgatgagttcaggagtgagctgatccagtacctg aagagtgatgaggttcgaagctacatctcagggccacctgggtcccctggaccaccggga ccaccaggacccaaaggagatagtggtttggtggctgggtctatgtcttcattataccat gattcactggcttctgagcggttgcatggaggatccattggtgctgagggatcccatggg ggatcacttggcgcaacgagctcttacggcagttctatgagcagcagcatgtcatcatac agtgcttccatgggcagcgatggctcttacggtgcctccgtgggcagtgatgggtcgttt gatgggctgctgacagctgaggagtcacacaggagatcagcaggtccaggcagatcttat agcagctcctttactggatccctggattacaatgagctggctcgacacgtgtcagagaac ctacaaagccgaggtatcctccaggacttgatgtcttacactggacagggccctccagga cctcctggacctcctggacctcctggaataagcagagtctttgcagcctatggtaacgtc actgaggacctcatggacttcttcagaacacacggtactgtccggggaccacctggtgag aaaggagagcggggttatcccggccccaaaggtgaccctgggccaatgggcccaccagga cgccatgggcagaggggaccaaaaggagagaaaggcgagaaaggtgaacaaatgtatagt ggcagaaggagaagaagaagcgttggggtttaa

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