Gallus gallus (chicken): 396548
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Entry
396548 CDS
T01006
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain precursor
KO
K06238
collagen type VI alpha
Organism
gga
Gallus gallus (chicken)
Pathway
gga04510
Focal adhesion
gga04512
ECM-receptor interaction
gga04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
396548 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
396548 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
396548 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gga04147
]
396548 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
gga00536
]
396548 (COL6A3)
Exosome [BR:
gga04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
396548 (COL6A3)
Glycosaminoglycan binding proteins [BR:
gga00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
396548 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
396548 (COL6A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
Kunitz_BPTI
fn3
Motif
Other DBs
NCBI-GeneID:
396548
NCBI-ProteinID:
NP_990865
CGNC:
2875
Ensembl:
ENSGALG00000003923
UniProt:
A0A8V0YMB7
LinkDB
All DBs
Position
7:4846470..4899768
Genome browser
AA seq
3137 aa
AA seq
DB search
MRKHRHLPLAAILGLLLSGFCSVGAQQQAAVRNVAVADIIFLVDSSWSIGKEHFQLVREF
LYDVVKALDVGGNDFRFALVQFSGNPHTEFQLNTYPSNQDVLSHIANMPYMGGGSKTGKG
LEYLIENHLTKAAGSRASEGVPQVIIVLTDGQSQDDVALPSSVLKSAHVNMIAVGVQDAV
EGELKEIASRPFDTHLFNLENFTALHGIVGDLVASVRTSMTPEQAGAKGLVKDITAQESA
DLIFLIDGSDNIGSVNFQAIRDFLVNLIESLRVGAQQIHIGVVQYSDQPRTEFALNSYST
KADVLDAVKALSFRGGKEANTGAALEYVVENLFTQAGGSRIEEAVPQILVLISGGESSDD
IREGLLAVKQASIFSFSIGVLNADSAELQQIATDGSFAFTALDIRNLAALRELLLPNIVG
VAQRLILLEAPTIVTEVIEVNKKDIVFLIDGSTALGTGPFNSIRDFVAKIVQRLEVGPDL
IQVAVAQYADTVRPEFYFNTHQNRKDVMANVKKMKLMGGTALNTGSALDFVRNNFFTSAA
GCRMEEGVLPMLVLITGGKSMDAVEQAAAEMKRNRIVILAVGSRNADVAELQEIAHERDF
VFQPNDFRLQFMQAILPEVLSPIRTLSGGMVIHETPSVQVTKRDIIFLLDGSLNVGNANF
PFVRDFVVTLVNYLDVGTDKIRVGLVQFSDTPKTEFSLYSYQTKSDIIQRLGQLRPKGGS
VLNTGSALNFVLSNHFTEAGGSRINEQVPQVLVLVTAGRSADPFLQVSNDLARAGVLTFA
VGVRNADKAELEQIAFNPKMVYFMDDFSDLTTLPQELKKPITTYVSGGVEEVPLAPTESK
KDILFLIDGSANLLGSFPAVRDFIHKVISDLNVGPDATRVAVAQFSDNIQIEFDFAELPS
KQDMLLKVKRMRLKTGKQLNIGVALDEVMRRLFVKEAGSRIEEGIPQFLVLLAAGRSTDE
VERPSGALKEAGVVTFAIKAKNADLSELERIAYAPQFILNVESLPRISELQANIVNLLKT
IQFQPTVVERGEKKDVVFLIDGSDGVRRGFPLLKTFVERVVESLDIGRDKVRVAIVQYSN
AIQPEFLLDAYEDKADLVSAIQALTIMGGSPLNTGAALDYLIKNVFTVSSGSRIAEGVPQ
FLILLTADRSQDDVRRPSVVLKTSGTVPFGIGIGNADLTELQTISFLPDFAISVPDFSQL
DSVQQAVSNRVIRLTKKEIESLAPDLVFTSPSPVGVKRDVVFLVDGSRYAAQEFYLIRDL
IERIVNNLDVGFDTTRISVVQFSEHPHVEFLLNAHSTKDEVQGAVRRLRPRGGQQVNVGE
ALEFVAKTIFTRPSGSRIEEGVPQFLVILSSRKSDDDLEFPSVQVKQVGVAPMVIAKNMD
PEEMVQISLSPDYVFQVSSFQELPSLEQKLLAPIETLTADQIRQLLGDVTTIPDVSGEEK
DVVFLIDSSDSVRSDGLAHIRDFISRIVQQLDVGPNKVRIGVVQFSNNVFPEFYLRTHKS
KNAVLQAIRRLRLRGGYPVNAGKALDYVVKNYFIKSAGSRIEDGVPQHLVVILGDQSQDD
VNRPANVISSTSIQPLGVGARNVDRNQLQVITNDPGRVLVVQDFTGLPTLERKVQNILEE
LTVPTTEGPVYPGPEGKKQADIVFLLDGSINLGRDNFQEVLQFVYSIVDAIYEDGDSIQV
GLAQYNSDVTDEFFLKDYSSKPEILDAINKVIYKGGRVANTGAAIKHLQAKHFVKEAGSR
IDQRVPQIAFIITGGKSSDDGQGASMEVAQKGVKVFAVGVRNIDLEEVSKLASESATSFR
VSTAQELSELNEQVLVTLAAAMKEKLCPGTTDVTRDCDLDVILGFDVSDVGAGQNIFNSQ
RGLESRVEAVLNRITQMQKISCTGSRAPSVRVAIMAQSRGGPVEGLDFSEYQPELFERFQ
GMRTRGPYFLTAETLKSYQNKFRSAPSGSTKVVIHFTDGTDDYLDQMKTASADLRRQGVH
ALLFVGLDRVKNFEEVMQLEFGRGFTYNRPLRVNLLDLDFELAEQLDNIAERTCCGVPCK
CSGQRGDRGLPGPIGPKGATGEIGYGGYPGDEGGPGERGPPGVNGTQGFQGCPGHRGTKG
SRGFPGEKGELGEMGLDGIDGEEGDKGLPGSSGEKGFSGRRGSKGAKGERGERGDRGLRG
DPGESGADNTQRGTRGQKGEIGQMGEPGPAGQRGQDGGVGRKGMAGRRGPIGVKGTKGAL
GQPGPAGEQGMRGPQGPPGQIGTPGIRGEQGIPGPRAGGGQPGAPGERGRIGPLGRKGEP
GNPGPRGPNGQQGPRGEMGDDGRDGIGGPGPKGRKGERGFVGYPGPKGGPGDRGGAGGPG
PKGNRGRRGNAGNPGTPGQKGEIGYPGPSGLKGDKGPSISQCALVQNIKDKCPCCYGPKE
CPVFPTELAFAIDTSSGVGRDVFNRMKQTVLRVVSNLTIAESNCPRGARVALVTYNNEVT
TEIRFADARKKSSLLQQIQNFQATLTTKPRSLETAMSFVARNTFKRARSGFLMRKVAVFF
SNGETRASPQLNDAVLKLYDAGVTPVFLTSRQDAVLERALEINNTAVGHAIILPTSGSQL
NDTIRRLLTCHVCLDVCEPDPICGYGSQRPVFRDRRAAPTDVDTDIAFIMDSSASTTPLQ
FNEMKKYISHLVSNMEISSEPKISQHHARVAVLQQAPYDHETNSSFPPVKTEFSLTDYGS
KEKIINYLHNQMTQLYGTMAMGSAVEHTVAHVFESAPNPRDLKVIVLMITGKMEKQELEY
LREAVIDAKCKGYLFVILGIGKNVDVKNIYSLASEPNDVFFKLVSKPGELHEEPLLRFGR
LLPSFIRSDFAFYLSPEIRKQCKWLQADQTPKSPGHTGQKAVYIAPNGTVTQTISTTTTL
STTFKPAASTSAHAKTTTASTTAQTRATERPTESTTVQVNATVQSQGSTAANTKATSRTT
TSTTAAAASGRRRQGAKMNDIQITDVTENSARLRWASPEPHNAYVFDLAITLAHDHSLVL
KQNVTGTERVIGGLRSGQKYLVFITGYLKSQPKVTYTGTFSTKTPAQPKVALANMMLNAE
PLEGPENVMDICLLQKEEGTCRDFVLKWHYDLKTKSCARFWYGGCGGNENRFNTQKECEK
ACSPGNISPGVVTTIGT
NT seq
9414 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagcatcggcatttgccccttgcggcaatacttggcctcctgctctcaggcttt
tgctcagtgggtgcccagcagcaagcagctgtcagaaacgttgccgtggctgatataata
tttctagtggattcctcttggagcattgggaaggagcacttccaactcgttcgagagttt
ctgtatgatgttgtaaaggctttagatgtgggaggaaatgatttccgttttgcactggtc
cagttcagcggaaacccacacacagagttccagttaaatacgtacccctctaaccaagat
gtgctctcccatatcgcgaatatgccttacatggggggaggcagcaagactggaaaagga
ttagagtacctaatcgagaaccatctcactaaagctgctggaagcagagcgagtgaaggc
gtcccccaggttattatagtgttaacggacggacaatcccaggatgatgtggctctgcca
tcatctgtccttaaatcggcccatgtaaacatgattgcggtcggcgtgcaggatgcggtg
gaaggggagttaaaggagatagcgagccgacccttcgatacccaccttttcaacctagag
aattttaccgctctccatggcatagttggagacttagtggcaagtgtccgtacctccatg
actccagaacaggctggagccaaaggactggttaaagacatcacagctcaagagtctgct
gaccttattttccttattgacggatcagacaacatcggaagtgtcaattttcaagccata
cgcgatttccttgtaaatttgattgaaagcctcagagttggagctcagcagatacacatt
ggggtggtgcagtatagtgatcaacccagaactgagttcgctttgaacagctactccaca
aaagcggatgttctggatgccgtgaaggcactcagtttccgcggtggcaaggaagctaac
actggtgcagcactggagtatgtggtggagaacctcttcacccaggcaggaggcagcagg
atagaggaagcggtgcctcagatcttagtgctgataagtggtggagagtctagcgatgat
atccgagagggcttgttagcggtgaagcaagctagtatattttcatttagcattggggtc
ctgaatgctgacagtgcagagctgcagcagattgctactgatggaagcttcgcatttact
gccctggatatccgtaaccttgctgctcttcgagaattattactgcccaacattgttgga
gtggcccaaagactcattttgttagaggccccaaccattgtgactgaagttattgaagtg
aacaagaaggatatagtcttcctgatagatggctcaacagctctggggactggccccttt
aactcaattcgtgatttcgttgccaaaatcgtccaaaggctggaggttggacctgacctg
atccaagttgcggtggctcagtatgcagacactgtgaggccagagttttattttaacacc
catcagaacagaaaggatgtgatggctaatgtgaagaaaatgaagctcatgggcggtacg
gccctcaacactggctcggcactggactttgtgaggaacaacttcttcaccagtgctgcc
gggtgtaggatggaggaaggggtgctccccatgctggtactcatcactggtggtaagtcc
atggatgccgttgagcaagctgcagcagagatgaaaaggaacaggatagtgatccttgct
gttgggtcgagaaatgctgacgtggcagaactccaagaaattgctcatgagagagatttt
gtgttccaaccaaatgatttccgccttcagttcatgcaagccattcttcctgaggtgctg
tcacccatccggacactctccggaggaatggtcatccacgaaacaccatcagttcaagta
accaaaagggatatcatctttcttttggatggatcactcaacgtcggaaatgccaacttc
ccctttgtgcgggactttgttgtgactttagttaactaccttgatgtcggaaccgacaaa
atccgagttggcttagtgcaatttagcgacactcctaaaaccgagttctccctatactca
taccaaaccaaatcagacataattcaacgtttggggcagctgaggcccaagggtgggtca
gtgctgaacaccggctctgcactgaactttgtgctttcgaatcacttcactgaagctggt
gggagcagaataaatgaacaagtgccgcaggtcctagtcctggtgacggcagggaggtcg
gccgatcccttcctgcaagtttccaatgacttagctcgggccggagtgctgacttttgct
gttggagttaggaatgcggataaggcagagcttgaacagattgcatttaatccaaaaatg
gtatattttatggatgatttcagtgatctgacaacattacctcaggagttaaaaaagcct
ataacaacatatgttagtggaggtgtggaggaggttccactcgccccaacagaaagcaag
aaagacattttattcctgattgatggttcagccaacctcttgggtagctttcctgctgtc
cgggactttatacacaaagtcatttctgacctgaacgtgggtcccgacgccacgcgagta
gctgtggctcagttcagtgacaacatccaaattgaatttgactttgctgaactcccatct
aagcaagacatgcttctgaaagtgaaaaggatgaggttaaaaactgggaagcagctgaat
atcggagttgcgctcgatgaagtcatgaggaggctgttcgtgaaggaagctggaagcagg
attgaagaaggcattcctcagttcttggtcctcctggctgctgggaggtcaaccgatgag
gtggagcgaccatcgggagctctgaaggaagctggagttgtgacctttgctatcaaagcc
aaaaatgctgatttatcagagctggaaaggatagcttacgccccacagttcattctgaat
gtcgaatcccttcctcggatttcggagctccaggcaaacatagtgaacctactgaaaact
atccagtttcagccaacagtagttgagagaggtgagaagaaggatgtggtgtttctaatc
gatggctcggatggtgtcagaagaggtttccctctcctgaaaacctttgtggaaagagtt
gttgaaagccttgatattggccgtgacaaggtccgtgttgccattgtgcagtacagcaac
gccatacaacctgagttcttgctggatgcctacgaagacaaagccgatttagtcagtgcc
atccaggcgctgacaattatgggaggatctcctctgaacaccggagcagccctcgactat
ctcatcaagaacgtgttcaccgtgtcgagtggcagcaggatagctgagggcgtcccgcag
ttcctgatcctgctcactgccgaccgatcccaggatgatgtgaggaggccctcagtggtc
ctcaagacgagtggcacagtgcccttcggcatcgggattggaaatgccgacctcacagag
cttcagacgatctccttcctcccggattttgctatctctgtacccgacttcagccagctg
gattcagtgcaacaggccgtgtccaacagagtcatccggctgaccaagaaagaaatagag
tctcttgcccctgatctggtttttacatcacccagcccagtgggtgtgaagagggatgtt
gtgttcctggtcgatggctcccgctacgccgcccaggaattctacctcatccgtgatctc
attgagaggatagtgaacaacctggatgtgggctttgacaccactcggatttcggtggtc
cagttcagcgagcatccccatgtagagtttcttctcaatgcccactccaccaaggatgag
gtgcaaggtgcagtgaggcggctgcggccacggggtggccagcaggtgaacgtgggggaa
gcccttgaatttgtggcaaaaaccatctttacccgtccgtctgggagccgcatagaagag
ggcgtccctcagtttttggttatcctctcctcccgcaagtccgacgatgacttagaattc
ccatcggtacaagtcaaacaagtaggagtggcacctatggtcatagcaaagaacatggat
cctgaggagatggtgcagatttcccttagccctgactatgtgttccaagtctccagcttc
caggaactgcccagccttgaacagaagctgctggctcctattgaaaccctgactgcagac
caaatcagacaactcctgggagatgtgacaacaattccagatgtttctggtgaggaaaag
gacgtagtcttccttattgatagctccgacagcgttaggtctgatgggcttgctcacatt
cgggatttcatcagcagaattgtccagcagcttgatgttgggccaaacaaagtgcggatt
ggagtggtgcaattcagcaataatgtcttccctgagttctacttgagaacccacaagtct
aagaatgccgtactgcaagccatccgccgcttacggcttagaggagggtaccccgtgaac
gctggcaaagccctggactacgtggtgaagaactacttcatcaagtctgcagggagcagg
atagaagatggagtgccccagcatctagttgtcatccttggagatcagtcccaggatgat
gtcaacaggcctgctaatgtgatctcttcaacgagtattcaacctctgggtgtaggagcc
aggaatgtagacaggaaccagctgcaggtcatcaccaatgatcctggccgcgtgcttgta
gtgcaggacttcacaggactgcccactttagaaagaaaggtgcagaacattcttgaagag
cttacagtacctacaacagaaggccctgtatatccaggaccagaaggcaagaagcaggct
gacattgtgtttttgctggatggctccatcaacctgggaagagataacttccaagaggtt
ctccagttcgtgtattctatagtggatgccatctatgaggatggtgactccatccaggta
ggactggcacagtacaactctgatgtcactgatgagtttttcctcaaggattactccagc
aaacctgagattttagacgccatcaacaaggtgatctacaaaggtggccgagtggcaaac
actggtgcagccatcaagcaccttcaggcaaaacactttgtgaaggaggctggcagccga
attgaccagagggtgcctcagatcgccttcatcatcacaggggggaaatcttccgatgat
gggcaaggtgcctccatggaagttgcacagaagggtgtcaaggtgtttgcagttggtgta
aggaacatcgacctggaggaggtcagcaagttggccagcgagagtgccacgagtttcaga
gtgtcgacggctcaggagttgtctgaactgaatgagcaggtcttggttacattggcagct
gctatgaaggagaaactgtgcccaggaacgacagatgtgacaagggactgcgacttagac
gtgatacttggcttcgatgtgtcagatgtcggagccggccaaaacatcttcaattcccag
agagggctggagtccagggtcgaggctgtgctgaacaggataacacagatgcagaagatc
agctgtaccggcagccgggcgcccagtgtcagagtggccatcatggcccagtcccggggg
ggacccgtggagggattggacttttctgagtaccagcctgagctctttgagaggttccaa
ggcatgcgcacccgtgggccctatttcctcacagccgagacactgaaatcctaccagaac
aagttcagatcagcaccctctggcagcacgaaggtggtaatccattttacagatggtaca
gatgactacttggatcagatgaagactgcctcggctgatttgcgtagacaaggtgtccat
gctctcctcttcgttggcttggatcgagtgaaaaactttgaggaagtgatgcagctggag
ttcgggaggggtttcacctacaacaggccgctgagagttaatctcctggacttggatttc
gagttggcagagcagctcgataacatcgcagaaaggacgtgctgtggggtcccttgcaag
tgctcagggcagagaggggacagaggtcttcccggccccataggaccaaagggtgctaca
ggtgagattggctacggaggctatcctggcgatgaaggaggaccgggtgagcgtggacct
ccaggagtgaatgggacgcagggcttccagggatgccctgggcacagaggaaccaagggt
tctcggggattcccaggagagaagggcgaactgggagaaatgggtctggatggcattgat
ggagaagagggagacaaaggcttgcctggttcctccggagagaaggggttctctggcagg
aggggtagtaaaggagccaaaggtgaacgaggagagcgaggtgaccgtgggctccgtgga
gaccccggagagtcgggagcagataatactcagcggggaaccagaggccaaaagggtgaa
atcggacaaatgggagagcctggacctgcggggcagagaggccaagatggaggagttggg
aggaagggcatggcgggacgcagggggccaataggagtcaagggtaccaagggcgcgctt
ggccagccagggccagctggagaacaaggcatgagaggaccacagggcccacctggccag
attggcactccaggcatcaggggagagcaaggcatccctgggcccagggctggtggtggg
caaccaggagcacctggagaaaggggcaggattggcccactgggacgaaagggtgagcct
ggaaatcctggacccaggggaccgaatggacagcaaggcccacgaggagagatgggtgat
gatggacgagatggaattggtggcccaggtcctaaaggcagaaagggagaacgtggcttt
gttggctacccaggacccaagggtggacctggtgaccgtggtggtgctggaggccccgga
cctaaaggaaacagaggccgtagaggaaacgctggaaatcctggcacacctggtcagaaa
ggagagattggataccccggaccatctggacttaaaggtgataaaggaccatccatcagt
caatgtgctctcgtgcagaacatcaaagataaatgcccttgctgctatggtcccaaggag
tgccctgtcttcccaaccgagctggccttcgctattgacacctcctcaggtgtcgggagg
gatgtcttcaacaggatgaaacaaaccgtgctcagggtggtcagcaacttaaccattgct
gagagcaactgccctcgtggtgcccgcgtggccctggtcacctacaacaatgaggtcacc
acagagatccgctttgctgatgccaggaagaaatcaagcctcctccagcagatccaaaac
ttccaggcaaccctgaccacaaagccacgcagcctggagactgccatgtcctttgtggcc
aggaacaccttcaagcgtgcccgaagtgggttcctcatgaggaaggtggctgtctttttc
agcaacggggagacgagagcctccccgcagctcaacgatgccgtgctgaagctctatgac
gctggggtcactcctgtgttcctcaccagcaggcaggatgcagttctcgaaagagctctg
gagatcaacaacacagcagttggacatgcaatcattcttccaaccagcggcagccagctg
aatgacactatccggaggctcttgacttgtcatgtttgtctggatgtgtgtgaacctgat
cccatctgcggttacggcagtcaaagacctgtattcagagacagaagggcagccccgaca
gatgtggacactgacatagccttcatcatggatagctcggcctccaccacacctctgcag
ttcaacgagatgaagaagtacatttcccacctcgtaagcaacatggaaatcagctctgag
ccaaaaatatctcagcaccacgcgagagtggcagtcctccagcaagctccttatgatcat
gaaaccaactcaagcttcccaccagtgaaaacagagttttcattaaccgattacggatcc
aaagagaagatcatcaattacttgcacaaccaaatgacgcagctctatggcacaatggcc
atgggaagcgcagttgaacacacagtggctcatgtttttgaaagtgcaccaaaccctcgg
gatctcaaagtcatcgttctcatgataactgggaaaatggagaaacaagagctggagtac
ttgcgggaggctgtaattgatgcaaaatgcaaaggatacttgttcgttatcttgggcatt
ggcaagaacgtggatgtcaagaatatctacagcctagctagtgagccaaatgacgtgttc
ttcaaattggtctctaagcctggagagcttcatgaagaacccctgctacgctttgggaga
ctgctgccatcttttatcagaagtgactttgctttctacctatctccagaaataaggaaa
cagtgcaagtggctccaggctgatcaaacacccaagagccctgggcacactggacaaaaa
gcagtatatatagcccccaatggaaccgtaacccaaaccataagcaccaccaccacacta
agcaccaccttcaagcctgctgcaagcaccagtgcccatgccaagaccaccactgccagc
accacggcccaaaccagagccacggagaggcccacagagagcactactgtccaggtgaat
gctactgtacagagccaaggaagcactgctgccaacaccaaagccaccagccgcaccaca
acgagcaccacagctgcagcagcaagcggcaggagaagacaaggtgcaaagatgaatgac
atccagatcacagatgtcaccgagaacagcgccaggctgcgctgggccagccctgagcca
cacaacgcctacgtgtttgatcttgccatcaccttagcacacgaccactctcttgtgctg
aagcaaaacgtaaccggcaccgaacgtgtcattgggggcctcagaagtggacagaaatac
ctcgtcttcattaccggctacctgaaatcccagcccaaagtgacctacacggggacattc
agcacaaagaccccagcgcagcccaaagtggctctggccaacatgatgctgaacgctgag
ccactggaagggcctgaaaatgtcatggacatctgcctgctgcagaaggaggaggggacc
tgcagggactttgtgctcaagtggcactacgacctgaagaccaagagctgtgccaggttc
tggtacggcggctgcggaggcaacgagaacagattcaacacgcagaaagaatgcgaaaaa
gcctgcagccctggtaacatcagccctggcgtggtgacgacgataggaacatag
DBGET
integrated database retrieval system
