Gallus gallus (chicken): 415656
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Entry
415656 CDS
T01006
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X2
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
gga
Gallus gallus (chicken)
Pathway
gga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
415656 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gga03019
]
415656 (EDC4)
Messenger RNA biogenesis [BR:
gga03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
415656 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
415656 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
WD40_CDC20-Fz
Beta-prop_HPS5
WD40_Prp19
Beta-prop_TEP1_2nd
WDR55
INTS5_N
Uteroglobin
Motif
Other DBs
NCBI-GeneID:
415656
NCBI-ProteinID:
XP_004944119
CGNC:
1139
Ensembl:
ENSGALG00000040875
UniProt:
A0A1D5PW21
LinkDB
All DBs
Position
11:913151..944428
Genome browser
AA seq
1352 aa
AA seq
DB search
MASSNSIDIEDATQHLRDILKLDRPGGSVNENQRPSSSYNGDLNGLLVPDPLVAGDGPAL
AKPVHRSISLGAVQEKQVICLSGDDSSTCIVISAKDVEIVASSDSSITSKARGSNKVKIQ
PVARYDWEQKYYYGNLIAVSNSYLAYAIRAASNGSAMVRVLSVSTAERTLLKGFTGGVAD
LAFAHLNSNQLACLDEAGNLFVWRLAMEEDKIQEEILVNIKRPDGTPLNTSRRIIWCPFI
PDDNEENSEEGSQTLALLHEDRAEVWDLDIIRSNNRSWPVEVPNIKEGFIVVKGHSTYLS
EGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQD
PEVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSMSILPSLKVCLDLSAEYL
ILSDVQRKVLYVMELMQNQEKGKAYFSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAE
EENDNLSIEGAQGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDMGASVPSHGSH
EEFAFPDHIADLGAEGLGSEKGSVHGSQPDLRRIADLPVPADFLSLSNDAKPKLMTPDAF
MTPSTSLQQITVSPGSSVSSLTAVTAMSSTSVTDASMSRPSEDLTVSPKMQLDTSLTLSS
SSSSLQTSPRSHSVLIPGLPDKLTPKAPVPVTPGGNSSLALELQEVEPLVVPQASPTRER
SPDVISSASTAMSQDIPEIASETLQRSFAAAPPALSAEVLEPSHHADSMASAASALHLLS
PRNRHNSEHSHHSLDMPPVEVDRLNAPSLLETALTQENASLDSVVSQPWPAAPDITRETR
NSMADSPRDEVEEKHKSSSYHRHSYHLLQHDSQDASAEQRDVNQSPRSSNNQVTPEFQEE
LMCVLRSQQRELSELRQNQMELLQRLTDHLDAVQSSLMGHMERVIDSQQEQEQRRLDRAL
TEGQQRNGQLQEHLSQQLSQTLSSAVCNRLERTVREEMKKTVPQCISKSVDPVAGQLSST
IATKLTAVEGTLKENITKLVKSKNLTDSVVRATADTLQGPIQSAYREAFQSVVLPAFEKS
CQSMFQQINDTFKQGTQEYIQQLETHMKNKKAREQEARDPLLNQLRQLISTFQSSTEQLA
STIAANIHAEVQHQLHIIVGNLQESILTQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSA
AGTPIPSTHLDFQSQQTHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDTQQVFGQQ
PCPLSQPVLLSLIQQLSSDLGTRTELKLNYLEEAVMHLDHSDPITRDHMGSVMSQVRQKL
FQFLQVEPHNTLSKPARRLMIMLQGLVTPGMT
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctccaacagcatcgacatcgaggacgccacgcagcacctgcgggacatcctc
aagctggaccggccgggaggttcggtgaatgagaaccagagaccatcaagttcctataac
ggagacctgaatgggctgctggtgcctgatcccctcgtggctggagatggacctgcgctg
gcaaagccggtgcaccgcagcatttctctgggagctgtgcaggagaagcaagtcatctgc
ctttctggtgatgacagctccacttgcatagttatatcagcaaaggatgtggaaatagtg
gccagcagtgattccagcatcaccagtaaggccagagggagtaacaaggtgaaaatacag
cctgttgctagatatgactgggagcagaagtactattatggcaatctgatagctgtttca
aactcttacctggcttatgccattagagctgccagcaatggctctgctatggtgcgagtg
ttgagcgtcagcactgcggagcggaccttgctgaaggggttcacaggtggtgtggcagac
ctggcttttgctcatctcaactccaaccagctggcgtgcctggatgaggctggcaacctc
ttcgtctggcgcctggccatggaggaggacaaaatccaagaggagatcttggtgaacatc
aaacgacccgacggcacccctctgaacacctctcgaagaatcatctggtgtcctttcatc
ccagatgataatgaagagaacagtgaagagggaagtcaaacgttggcattgctgcacgag
gacagggcagaggtatgggatttggacattatccgctcaaacaacagatcctggccagtg
gaagtgcctaacatcaaagaaggcttcattgtagtgaaaggccacagcacgtacctgagc
gagggagcactttctccggatggaactgtgttggccacagcaagtcatgatggttttgtc
aaattctggcagatctatattgaggggcaagacgagccaagatgtcttcatgagtggaaa
ccacatgatgggaggcctctttcctgcctgctcttctgtgacaaccacaaaaagcaagac
ccagaggttcccttctggaggtttctcatcacgggagcagatcagaacagagagctgaag
atgtggtgcactgtgtcttggacctgcctgcagaccgtccgattctctcctgacatcttc
agctccatgagtattcttcccagcctgaaagtctgcctggacctctctgctgaatatcta
atactgagcgatgtgcagagaaaagtcttgtatgtgatggagctgatgcagaaccaagag
aagggcaaagcttatttcagttccatctcagagtttctcctaacccatccagtcctcagc
ttcggcatccaggcagtgagccgctgccggttaaggcacactgaggtgcttccagcagaa
gaggaaaatgacaacttgagtatagaaggtgctcagggagcaggggctgttgagtcagca
gctggcgtgctgataaaactcttctgtgtgcacaccaaagctctacaagatgtgcagatc
agattccagcctctccatagtcctgacatgggtgcatctgtgccttcccatggctctcat
gaagaatttgcctttccagatcacatagcagatctaggcgcagaagggctgggatcagaa
aaaggatctgtgcatggctctcaaccagacttgcgacgtatcgctgatctgcctgtacca
gcagacttcctttcgctctcaaatgatgccaagcctaagctgatgactccagatgcattc
atgacaccgagcacatctctccaacagatcactgtatctccgggcagcagtgttagttcc
ctgactgcagtcacagccatgagcagcacttctgtcacagatgcttctatgtccaggccg
tcagaagacttgactgtgagccccaagatgcagctggacaccagcctcacgctgagtagc
agtagcagcagcctccaaactagtcctaggagccattctgttcttatcccaggccttcct
gacaagctgacaccaaaggcacctgttccggtcacacctgggggaaactcctctctagct
ctggagctgcaggaagtagagcccttggtggtacctcaggcttctcccacccgtgagcgc
tcgccggacgtcatttcctctgcttccacagccatgtcccaggatatccctgagattgct
tccgagaccttgcagcgtagctttgcagcagctccacctgcgctctctgcagaggtgctg
gagcccagtcatcacgcagacagcatggcatctgcagcctcagccttgcatttgctgtct
ccgaggaaccggcacaattcagagcacagccaccactctttggacatgcctccagtggag
gtggacagactgaatgctccgtcgttactggagactgctttaactcaggaaaatgcgtct
ttggacagtgttgtgagtcagccgtggccagcagctcctgacataaccagagaaaccagg
aacagcatggcagacagcccaagggatgaggttgaagaaaagcacaagagctcttcctat
catcgacacagctaccaccttctgcagcacgacagccaggatgctagtgcagaacaaagg
gatgtgaaccagtcaccaaggtcatctaacaaccaggtgacaccggagttccaggaagag
ctgatgtgtgtgctgaggagccaacagcgtgagctgtctgagctgcgtcagaaccagatg
gagctgctgcagaggctcacagatcaccttgatgccgttcagagctcactgatgggccac
atggagagggtgatcgactcccagcaggagcaggagcagaggagactggaccgagcactg
acagaaggacagcagcgcaacgggcagctccaggagcatctctctcagcagctctctcag
accctttccagtgctgtgtgcaaccgtctggagaggactgttcgtgaggagatgaagaag
acagtgccccagtgcatttccaagagcgtggacccagttgctggccagctaagtagtact
attgctaccaagctcactgctgttgaggggacgctgaaagagaacatcaccaagctagtg
aaatcaaagaaccttacagatagcgttgtgagggcaacggccgataccctgcagggccca
atccagtcagcctacagggaagccttccagagcgtcgtgttgccagcctttgagaagagc
tgccagtccatgttccagcagatcaatgacaccttcaagcagggcacgcaggaatacatt
cagcagctcgagactcacatgaagaacaagaaggcacgagaacaggaggcccgggaccca
ctgctgaatcagcttcgacagctcatcagcacctttcagagcagcaccgagcagctggct
tccaccatcgcagccaatatccatgctgaggtgcagcaccagctgcacattattgtgggc
aaccttcaggagtctattttgactcaggtgcagagagtcattaaaggagaagtgagcctg
gccatgaaggagcagcaagcagctgtcacctcgagcattgtccaggcaatgcgttcggct
gcagggactcccatcccctccactcacctggacttccagtctcagcaaactcacatcctt
cagctgctccagcagggccacctcaaccaagctttccagcaggctctaacagcagctgat
ctcaacctggtcctgtatgtctgtgagacagtggacacgcagcaagtgtttggccagcag
ccgtgcccgctgtcccagcccgtgctgctctcactcattcagcagctctcctcggatttg
ggtacccgtacggaactgaagctgaattacctggaggaggccgtgatgcacctggaccac
agtgaccccatcacccgggaccacatgggctcggtcatgagccaggtgcggcagaagctc
ttccagttcctccaggtggaaccccacaacacgctgagcaagcctgcacgccgcctgatg
atcatgctgcagggcctggtcactcctggcatgacctaa
DBGET
integrated database retrieval system
