Gallus gallus (chicken): 415680
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Entry
415680 CDS
T01006
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
gga
Gallus gallus (chicken)
Pathway
gga03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
415680 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gga03021
]
415680 (SF3B3)
03041 Spliceosome [BR:
gga03041
]
415680 (SF3B3)
03036 Chromosome and associated proteins [BR:
gga03036
]
415680 (SF3B3)
Transcription machinery [BR:
gga03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
415680 (SF3B3)
Spliceosome [BR:
gga03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
415680 (SF3B3)
Complex B
415680 (SF3B3)
Complex C
U2 SnRNP specific factors
415680 (SF3B3)
Chromosome and associated proteins [BR:
gga03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
415680 (SF3B3)
TFTC complex
415680 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
415680
NCBI-ProteinID:
XP_001232348
CGNC:
1817
Ensembl:
ENSGALG00000002531
UniProt:
A0A1D6UPS9
LinkDB
All DBs
Position
11:complement(1722530..1751092)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISYAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
EEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNGGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtacaacctcacgttacagcgtgccacgggcatcagctatgccatccatggc
aacttctcaggaaccaaacaacaagaaattgttgtttcccggggcaagatcttggagctg
ctccgccccgaccccaacacagggaaggttcacaccttgctgacggtggaagtgtttggg
gtcatccgctccctcatggccttccggctgacaggagggaccaaagactacattgttgtg
ggcagcgactcagggcgcattgttatcctggagtaccagccctccaaaaacgtgtttgag
aagattcatcaggaaacctttggcaagagcgggtgtcgcaggattgttccaggccagtac
ttggccgtagacccgaagggccgtgctgtcatgatcagtgctattgaaaagcagaagctg
gtgtatatcttaaacagagatgctgcagctcggctcaccatttcctccccactggaagcc
cacaaggccaataccttggtctaccacgtggtgggagtcgatgtgggatttgaaaaccca
atgtttgcttgtctggaaatggattatgaggaagcggacaatgatccaacaggagaagca
gcagccaacacacaacagaccttgacgttttatgaactggacttgggtttgaaccacgtt
gttaggaaatacagtgagcctttggaagagcatggcaacttcctcataacagttcctggt
ggttctgatggacctagtggggtgctgatctgttcagaaaactatatcacttacaaaaac
tttggtgaccagccggatatcagatgcccaattcccaggagacggaatgacttggatgac
ccagagagaggtatgatttttgtctgctctgctacacacaagaccaagtctatgttcttc
ttcctggcccagacggagcagggagacatcttcaaaatcaccctggagactgacgaagac
atggtaactgagattcgactgaagtacttcgacaccgttcccgtagctgctgccatgtgt
gtgctgaagacgggatttctctttgtggcatctgaatttggaaaccattatctgtaccag
atcgcccacctgggtgatgatgatgaggagccagagttctcttctgccatgcctcttgag
gaaggagatacattcttttttcagccacgacctctcaaaaacctggtgctggtggatgaa
ttggacagtttgtctcctattctgtgctgtcagatagcagatctggcaaatgaggacacg
ccccagctgtatgtggcctgcggtcgggggccacggtcatctctgagggttctaagacat
ggacttgaggtatctgaaatggccgtctcagagctgcccggtaaccccaatgctgtatgg
actgtgaggagacacgttgaagatgagtttgatgcctatatcattgtgtccttcgtaaac
gccacgctggtgctgtctatcggagagactgtagaagaagtgactgactctggattcctg
ggtactacacccaccttgtcctgctctcttctgggggatgatgccttggtacaggtgtac
ccagatggcatccggcacatccgagcagataagagggtaaacgaatggaagacaccaggg
aagaaaaccattgtgaaatgtgctgtgaatcagagacaagtagtgatagcactgactgga
ggagagctggtttattttgagatggacccgtcaggacagttgaatgagtacactgaaaga
aaggagatgtcggctgatgtagtttgcatgagtttggccaatgttccacctggggagcag
cgctcccggttccttgctgtcgggctggtggacaacactgtcaggattatttccctcgac
ccttcggactgcttgcagccactgagtatgcaggctcttcctgcacagcctgagtcactg
tgtattgtggagatgggtggcaccgagaaacaggacgagctgggggagagaggctccatt
ggtttcctctacctgaacattggactgcagaatggtgtgctgctgcgaactgtcctggat
ccagttacgggtgatctttccgataccaggaccagatacctgggctcacggcctgtgaag
ctcttcagagtccgaatgcaaggccaagaagcggtgctggccatgtcaagccgttcctgg
ctcagttactcctatcagtcacgtttccacctgactcccctgtcttatgagactctggag
tttgcgtcgggttttgcatctgagcagtgcccagagggcattgttgccatctccacaaac
acactgaggattttggcactggagaagctgggggcagtcttcaaccaggttgccttccca
ttgcagtacacgcctcgaaaatttgttattcaccctgagagcaacaacttgattatcatt
gagacggaccacaatgcttacactgaggccaccaaggcacagaggaagcaacagatggct
gaggaaatggtggaggctgcaggtgaagatgagagggagctggctgcggagatggctgca
gcctttctgaacgagaatctccctgaatccatcttcggtgctccaaaggcagggaatggg
cagtgggcctctgttatcagggtgatgaaccccatccagggaaatacattagatctggtc
cagctagagcagaacgaagctgctttcagtgtggctgtgtgccgcttctccaacactggc
gaggagtggtatgtgctggttggagttgccaaagacttgattctgaacccacgctctgtt
gctgggggcttcgtctacacctacaagctggtgaatggtggtgagaagctggagtttctg
cacaagactcccgtggaggaggttcctgcagccatcgcccctttccaaggtagggtccta
attggagttggaaagctcctgcgtgtgtatgacctgggcaagaagaagctgcttcggaag
tgtgagaacaagcacattgccaactacatctgtgggattcaaaccattgggcacagagtg
attgtttcggatgttcaggagagtttcatctgggtgcgctacaaaaggaatgagaaccag
ctcatcatctttgctgatgacacttatccccgctgggtcaccacagcaactctcctggat
tatgacactgtggccggagcagacaagtttggcaacatctgtgtggtgaggttgcctccc
aacaccaacgacgaggtagatgaggatcccactggcaacaaagctctctgggacagaggg
cttcttaatggagcatcgcagaaggctgaagtgattatgaattaccacgtgggagaaaca
gtgctttcattacagaaaaccacactgatcccaggaggctctgaatctctcgtctatacc
accttatcagggggaataggaatcttagttccttttacttcccatgaggatcacgacttc
ttccagcatgtggaaatgcacctaaggtctgagcatcctcctctctgtgggcgagaccat
ctcagtttccgctcctactacttcccagtgaagaatgtgatcgatggggacctgtgtgag
cagttcaactccatggagccgaacaaacagaagaatgtggccgaagagctggaccggacc
ccacccgaggtgtccaagaagctggaagacatccgcacacgctatgctttctga
DBGET
integrated database retrieval system
