KEGG   Gallus gallus (chicken): 415697
Entry
415697            CDS       T01006                                 
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
  KO
K10636  E3 ubiquitin-protein ligase AMFR [EC:2.3.2.36]
Organism
gga  Gallus gallus (chicken)
Pathway
gga04137  Mitophagy - animal
gga04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:gga00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    415697 (AMFR)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    415697 (AMFR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gga04121]
    415697 (AMFR)
Enzymes [BR:gga01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.36  RING-type E3 ubiquitin transferase (cysteine targeting)
     415697 (AMFR)
Ubiquitin system [BR:gga04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    415697 (AMFR)
  Multi subunit type E3
   ERAD complex
    415697 (AMFR)
   LMBR1L-GP78-UBAC2 complex
    415697 (AMFR)
SSDB
Motif
Pfam: G2BR zf-RING_2 CUE zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_11 zf-rbx1 zf-RING_UBOX zf-ANAPC11 zf-RING_16 zf-RING_5 Prok-RING_4 zf-C3HC4_4 zf_RING_Vps8
Other DBs
NCBI-GeneID: 415697
NCBI-ProteinID: XP_414064
CGNC: 2249
Ensembl: ENSGALG00000003107
UniProt: F1NBB7
LinkDB
Position
11:2163177..2183840
AA seq 622 aa
MPLLFLERFPWPSLRTYAALSGLALLAAALSAQRALSAAGEQRAGGPRALDVAYYLLSDS
LCVWVLVNTACCVLMLVAKLIQRVVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQT
VEEVVMWCLWFSGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHIRVLTLLVAMLLSCCGLA
VVCGVIGYTHGMHTLAFMAAESLLVTVRTAHVILRYVIHLWDLNHEGTWEGKGTYVYYTD
FVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGN
MEARFAVATPEELAVNNDDCAICWDSMQSARKLPCGHLFHNSCLRSWLEQDTSCPTCRMS
LNITDSHHVREDHQRENLDENLVPVAVAEGRPRLNQHNHFFHFDGSRIASWLPSFSVEVM
HTTNILGITQASNSQLNAMAHQIQEMFPQVPYHVVLQDLQLTRSVEITTDNILEGRIQVP
FPTQRAEAVRPASNSSVERHSADQEDTGTVTQTKRVPLELNSRLEEMGELSEVEAEPSEA
EDFEARGSRFSKSADERQRMLVQRKEDLLQQARKRYLNKTSDEELSTEKPSVPEGASADP
VTLRRRTLAAAAERRLQMQQNS
NT seq 1869 nt   +upstreamnt  +downstreamnt
atgccgttgctgttcctggagcgcttcccctggcccagcctgcgcacgtacgcggcgctc
agcggcctggccctgctggccgccgccctcagcgcccagcgcgccctcagcgcggccggc
gagcagcgggcgggcgggccgcgggccctggacgtcgcgtactacctgctgtccgacagc
ctctgcgtctgggtgctcgtgaacacggcgtgctgcgtgctgatgctggtcgctaagctg
atccagcgtgtggtgttcggcccgctgcgcgtcagcgagaggcagcatcttaaggataag
ttctggaatttcatcttttacaagttcatcttcatttttggtgtgctgaatgttcagaca
gtggaagaagtggtcatgtggtgcctctggttctctgggcttgtgtttcttcatctcatg
gtccagctctgcaaggatcgctttgaatatctgtccttctctccgacaacacccatgagc
agccacatcagagtactgaccctgcttgtcgccatgctgctgtcctgctgcgggctggca
gttgtctgtggtgttattggctacacccatgggatgcacaccttggctttcatggcagca
gagtctctgctggtgacagtcagaactgctcatgtgattttgcgatatgtaattcatctc
tgggatctcaaccatgaaggaacgtgggaaggtaaaggcacatatgtgtactacacggat
tttgtcatggagctgaccttgctttcgctggacttgatgcatcatatccatatgctgctg
tttggcaatatctggctgtcgatggcaagcctggtgatcttcatgcagctgcgctacctg
ttccatgaggtccagcgaaggattcggcggcacaagaactacctgcgtgtggttggaaac
atggaggcccggtttgcagttgcaacacctgaggagctagcagtcaataatgacgactgt
gccatctgctgggactccatgcagtctgcacggaagctcccctgtggccatctcttccac
aactcttgcctgcggtcctggctcgaacaagacacatcttgcccaacctgcagaatgtct
cttaatatcactgacagccatcatgtgagggaggatcaccagagggagaatctggatgag
aacctggtccccgtggcagtagcagaaggcagaccacgcttgaaccagcacaatcacttc
ttccacttcgatggctctcgaattgccagctggctgcccagtttttcagtagaagtgatg
catactaccaacatccttggtatcacacaagccagcaactcccagctcaacgctatggcc
caccagattcaggagatgttccctcaggttccttatcatgtagttctgcaggatctgcag
ctgacccgttctgtagagataaccactgacaacatcttggaagggcgcatccaagtgcct
ttccctacacagcgtgcagaggctgttagacctgcttcaaacagttctgtggaacggcac
agcgctgaccaggaggatactgggacagtcacccagaccaaaagagtgccacttgaactc
aactcaagactggaagaaatgggagaactgagcgaagtggaggcagaacccagtgaagca
gaagattttgaagccaggggaagtcgcttttcaaagtcagctgatgagaggcagcgcatg
ttggttcagcgaaaggaggacttgttgcagcaagctcgaaagcgttacttgaacaaaacc
tcagatgaagagctgagcacggagaagccctcagtgcccgagggagcctctgctgacccg
gtgacactgcgccgcaggacgctggcagccgctgccgagcggagactgcagatgcagcag
aactcatag

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