KEGG   Gallus gallus (chicken): 415889
Entry
415889            CDS       T01006                                 
Symbol
POC1A
Name
(RefSeq) POC1 centriolar protein homolog A isoform X2
  KO
K16482  centriolar protein POC1
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gga03036]
    415889 (POC1A)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:gga03037]
    415889 (POC1A)
Chromosome and associated proteins [BR:gga03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    415889 (POC1A)
Cilium and associated proteins [BR:gga03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   415889 (POC1A)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_EML ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_SCAP WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_Vps41 eIF2A Beta-prop_HPS5 Ge1_WD40 Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_DCAF4 Beta-prop_IP5PC_F Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C Beta-prop_WDR75_2nd Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 PROPPIN Nucleoporin_N PAN2_N
Other DBs
NCBI-GeneID: 415889
NCBI-ProteinID: XP_015148224
CGNC: 997
Ensembl: ENSGALG00000034572
LinkDB
Position
12:518129..592262
AA seq 406 aa
MAAGGAEDPSLERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGH
KDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVT
ASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECI
HSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPS
GNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVWKT
NFSAADYDGVLKTHKSGATVDGTHHRLPSEMDCGVHLKKTKSQDTGRNHERQEEDVHLAD
TLEHIIGQLDVLTQTVSILEQRLTLTENKLKEFLENQQKIIQNKEN
NT seq 1221 nt   +upstreamnt  +downstreamnt
atggctgctggcggcgcggaagatccgtccctagagaggcatttcagaggccacagagat
gccatcactagtgtggacttcagtctcaataagaaacaattggcaagtggttcaatggat
tcatgtctgaagatctggagtatgaaacctcagatgagagcctattgccttgtgggccac
aaagatgcagtgatgtgtgttcagttttccccttctggccaccttgtagcttcaggctcc
agagacaaaacagtctgcttatgggttccaagtgtcaaaggagaatctactgtgttcaag
gctcacacagcaactgtgagaagcgttcatttctccagcgatggccagtccttggttaca
gcttccgatgacaaaacaatcaaagtgtggacagttcacaggcagaagtttttgttctca
ctcagtcaacacataaattgggttcgttgtgccagattctctcctgatggacgattaata
gcatcagccagtgatgataaaactgtcaaactgtgggataaaactagcagagaatgtata
cattccttctgcgagcatggggggtttgcaaatcacgtggagtttcatcccagtggtacg
tgcattgctgcagctggtacagataagactgtgaaggtgtgggatgttaggatgaacaga
cttctccaacattatcaagtgcacaccgctgcagtaaacagtctttcctttcacccctct
ggaaattacctgattactgcttccaatgattcaactctcaaaattctggacttgctcgaa
ggaagacttctgtatactcttcatggtcaccagggtccagccacctgtgtagcattctcc
agaacaggagacttctttgcctctggaggatctgatgagcaggtgatggtatggaagact
aatttcagtgcagcagattacgatggagttctgaaaacacacaagtctggtgctactgtg
gatggaacccatcaccgtctgccatcagaaatggattgtggtgttcatcttaagaaaaca
aaatctcaggatactggtaggaaccatgaacggcaagaggaggatgtccatcttgcagat
accttggaacatattataggacaactggatgttctgactcagacagtttccatcctggag
cagaggctgacgctcacagagaacaagctgaaggagtttctggagaaccagcagaaaatc
attcagaacaaagagaactga

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