Gallus gallus (chicken): 416039
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Entry
416039 CDS
T01006
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X2
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
gga
Gallus gallus (chicken)
Pathway
gga03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
416039 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gga03400
]
416039 (XPC)
DNA repair and recombination proteins [BR:
gga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
416039 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
416039
NCBI-ProteinID:
XP_015148841
CGNC:
4785
Ensembl:
ENSGALG00000006357
LinkDB
All DBs
Position
12:complement(11187792..11198174)
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AA seq
801 aa
AA seq
DB search
MARKRKASVPRAPAGKRRPGGAGVRREREEEREEGDFVEEKRSVKKSRAGVAAWKEDDGG
AGAAKSANTPSKQKGVKRQAKENEISPENKGTHHKEQTCSDSRKAPRKEIKLKRESPIKK
EMDEDNTDDDDDDESEDEWEDVEELQEPATDKLEQGAVLPAVVLPSNPVEIEIETPEQLK
KRERREKRKAEFETYVRRMIKRFTKEVREDTHKVHLLCLLANGFYRNRICSQPDLHAIGL
SIIPIHFTKVPAGQVDLLYISNLVKWFVGTFTVNDELSTEKGEPLQSTLERRFAIYAARD
DEELVHIFLIILRALQLLCRLVLSLQPIPLKETKAKEKSTSKKQSLSSTSEGQESSGTTP
KAVAKKCPCKKAKRDEKSSGSEEDNEESKKTKSAQTERTHKSKLTAGNREQKETRNVDSG
LREKDVPVRPKNSRWRRVASKVCYKEESGSDEGSVSDFEISGEESDISDEDFETVSKKRR
SSQGAQKSKFQVKLQDQPLPTAIGEYKNHPLYALKRHLLKYQAIYPESAAILGYCRGEAV
YSRDCVHTLHSKDTWLKQARVVRIGEVPYKMVKGYSNQARKARLAEPANRDKADLALFGR
WQTEEYQPPIAVDGKVPRNEYGNVYLFLPSMLPIGCVQLRLPNLNRLARKLDIDCAQAVT
GFDFHGGYSHAVTDGYVVCEEYKEVLIAAWENEQAEIEKKEKEKREKRALGNWKLLTKGL
LIRERLKQRYSIKVEPSAPETEKGGGFSSDEEGPSSGTAGGGMEIFWPRNRQAEKQKEKA
TRKSKQEKKEEAAQLFPFEKL
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggaagcgcaaagcgtctgtcccgcgggcgcctgccggcaaaaggcggcccggg
ggggcgggagtgcggcgggaacgtgaggaggaacgtgaggagggtgattttgtagaggaa
aaacgcagcgtaaagaagagcagagccggagttgcagcttggaaggaggatgatggtggt
gccggagctgccaagtcagcaaataccccttcaaaacaaaaaggggtaaaacggcaagca
aaagaaaatgagataagccctgaaaataaagggactcatcacaaagagcaaacgtgcagt
gactcacggaaggcccctcggaaggagataaaattgaagagagaatctcctattaaaaaa
gagatggatgaagacaatactgatgatgatgacgatgatgaaagtgaagatgaatgggag
gacgtggaggaactccaagagcctgccacagataagttagaacaaggtgctgttcttcca
gcggtggtgctgccaagcaatcctgttgagatagagattgaaaccccagaacaacttaag
aaaagagagagaagagagaaaaggaaagctgagtttgagacttatgttcggagaatgatt
aaacgtttcactaaggaagttcgtgaggacacacataaggttcatctcttgtgtttatta
gcaaatggtttctataggaacaggatctgcagccagccagatcttcatgccattggtcta
tccatcatccctatacacttcacaaaagttcctgcaggccaagtggaccttctctacatt
tccaacttggtgaaatggtttgttggaaccttcacagtcaatgatgagctttccactgaa
aaaggagagccccttcagtcgaccttggagaggcgctttgccatctatgctgcacgagat
gatgaagagttggttcatatatttttaattattctcagagcgttgcagctgctgtgtcgc
ctcgtgctgtccttacagcccattcctctcaaggagacgaaggcaaaggaaaaaagcaca
tccaagaagcagtcgctcagcagtacctctgaggggcaggagagctcaggcacaacacca
aaagctgtggcaaaaaagtgcccctgcaaaaaagccaaacgggatgagaaatcatcgggg
agtgaagaagacaatgaggagtcaaagaaaacaaaaagtgctcagaccgaaaggacacac
aagtcaaaactgacagcaggcaacagggaacagaaagaaactaggaatgtggacagtggt
ttaagggaaaaagatgtgccggtcaggcctaagaacagtcgctggagacgagtggcctcc
aaagtgtgttacaaagaagagagtggaagtgatgagggcagtgtttctgactttgagatt
tcaggagaggaaagtgatatctctgatgaggactttgaaactgtctctaaaaagcggaga
agctcacaaggtgcccagaaatcaaagtttcaggttaagcttcaggatcagcctctacca
acagcaattggagagtacaaaaaccaccctctgtatgcactgaagaggcatctattgaaa
tatcaggccatctatcctgagtcagctgctatcctagggtactgcaggggagaggctgtt
tactcgagggactgtgtacacacactccactccaaggacacttggcttaagcaggctcga
gtggtgaggattggagaagtgccttacaaaatggtgaagggctattccaaccaggcaagg
aaggcacgccttgcagagcctgcaaaccgggacaaagcggacctggcgctgtttggtcgc
tggcagacagaggagtatcaaccgcccatagcagtggatggaaaggttcctcggaatgaa
tatggaaacgtctatctcttcctgccctctatgttacccattggttgtgtgcagcttaga
ctccccaacctgaacagattggcacggaagctggacattgactgtgctcaggctgtcact
ggatttgactttcatggtggctactcacacgcagttactgatggctatgttgtctgtgaa
gaatataaagaggtgctcattgctgcctgggagaatgaacaagcagaaatagaaaagaag
gagaaggagaagcgtgagaagagagctctggggaactggaagttgctgacaaaaggactt
ctcattagagagagactgaagcaacgctactccatcaaggttgagccatcagcacctgag
acagagaaaggaggaggattctcctctgatgaagaaggcccgagttcagggactgcagga
ggaggcatggaaattttttggccccgaaatcgccaggcagagaagcagaaagagaaggca
actagaaaaagcaagcaagaaaagaaggaagaagcagcacagttgtttccttttgaaaaa
ctgtga
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