Gallus gallus (chicken): 416243
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Entry
416243 CDS
T01006
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gga03000
]
416243 (SOX30)
Transcription factors [BR:
gga03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
416243 (SOX30)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
416243
NCBI-ProteinID:
XP_414564
CGNC:
2722
Ensembl:
ENSGALG00000045860
UniProt:
A0A8V0YWL5
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Position
13:12015868..12023928
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AA seq
642 aa
AA seq
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MERGGGGSHGPDSDLDLCSQGPSGGEELQAPLQETRVKAKELQQQHGGFLACPEGNKEAG
GELRCSPAPWGGKEKALCAKEDQEKYGGEEQEDVMVVEVRGAVKEPCPGARTDGDEDCAA
GRASHGPTHISSDGGVAQPSEGLGVLPEDLKIPLVLRPLPPGARIQVQGPLLPKLIQVSK
GPVSQVPLKMQSLLEPSVKIETKNVPLTVLPSDSGMPDTPFSKDKTGHVKRPMNAFMVWA
RIHRPALAKANPNANNAEISVQLGLEWSKLTEEQKQPYYDEARKIKQRHREEFPGWVYQP
RPGKRKRYPLAVSAVFSSTTQNIITTNPVAVYPFPSPAFPAAMHSIQKNIGHPVCESPSA
TRLPASSIQRPGPINLFRPAIASTTPVAVPAPTLPLRPIIAPQHFAEPTQREARDVSPGS
YCFLKRSTPVVVDLSSRSSNSTTSTNDRFSAPNSEFPKEYPGISAYPRGVLLPQVTPLPH
SHLCESPPIGQAAGLYGVPPQFSFYHPYFVPGPHYFPSSTCPFSRPPFGCGNFSSSVPEC
LGFYGDGYQKQEMKFSPLDRDYSFRGHPGGGIREDSRVCAHLEEVTSHSSHSEEGYVSPI
SQLDTGALENDLPATPPSPSSIQLVNVTDSEDEEEKKVLQEL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggagcggggcgggggcggcagccacggcccggattctgacctcgatctctgctcccag
ggtccctcaggcggtgaggagctccaggcgcccctgcaggagacgcgcgttaaagccaag
gagctccagcagcagcatggaggcttcctcgcctgtcctgagggcaacaaggaagcagga
ggggagctcaggtgttccccagctccatgggggggaaaagagaaggctctctgtgcaaaa
gaggatcaagaaaagtacggcggagaagagcaggaagatgtgatggtggtggaggtcaga
ggtgctgtgaaggagccctgtccaggagcgaggacggatggggatgaggactgtgctgca
ggcagggcctcgcatgggcccacacatatcagcagtgatggtggcgtggcacagcccagt
gaggggctgggggtcctccctgaagacctgaagattcccctggtgcttcgccctttgcct
cctggtgcccgtatacaagtccaaggccctctgctgccaaagctgatccaggtgtctaag
gggcccgtgagccaagtgcctcttaaaatgcagtccctgctggagccttccgtaaaaatt
gaaactaaaaacgttcccctcacagtactgccctccgattcaggtatgccagatactcca
ttcagcaaggacaaaactggccacgtaaagcgtccaatgaatgcgtttatggtgtgggca
aggattcaccgacctgccctagctaaagccaaccccaatgccaataatgctgaaatcagc
gttcagctcgggttggagtggagcaaactgactgaagagcagaaacaaccctattacgac
gaagctcggaaaataaaacaaaggcacagagaggaatttcctggttgggtttatcaacca
cgaccaggcaagaggaagcgttatccactggctgtctctgctgtattttccagcactacc
cagaatatcatcactacaaacccggttgctgtttatccctttccatcgcctgcattcccc
gctgccatgcacagtattcagaaaaatattggacatccagtctgtgaatctccttctgcc
acccggctgccagcttcttctattcagcgtccaggtccaattaatctttttcgacctgct
attgcaagcaccactccagtggcagttccagctccaactctgcctctgcgccctataatt
gcaccacagcactttgctgagcctactcagagagaagctcgtgatgtatcacctggatcc
tattgctttctgaaaagatcaacaccagttgttgttgatctctccagtagaagttcaaat
agcacaacaagcactaatgacagattttctgcccctaatagtgagttcccaaaggagtac
ccagggatttctgcttatcctagaggtgtacttcttcctcaggttacccctcttcctcat
tcgcatctctgtgagagccctcctattgggcaggcagccggtctgtacggagtacctcct
cagttttcattttatcacccctactttgttcctggacctcactatttcccctcaagcacg
tgcccattcagccgtcccccttttggctgtgggaatttctccagctcagttcctgaatgc
cttggcttctatggagatggctaccaaaagcaggagatgaagttttcacctctggacaga
gattactctttcaggggacacccagggggaggcatacgtgaagactcacgtgtttgtgca
cacctcgaagaagtgacctctcacagcagccacagtgaggagggttatgtaagccccata
tcacagctagacactggagcacttgagaatgatttgccagcaaccccaccttctccttcc
agcattcagctagtcaatgtgactgatagtgaggacgaagaagaaaaaaaggtgttgcaa
gagctgtaa
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