Gallus gallus (chicken): 416329
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Entry
416329 CDS
T01006
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
gga
Gallus gallus (chicken)
Pathway
gga03440
Homologous recombination
gga03450
Non-homologous end-joining
gga04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
416329 (RAD50)
03450 Non-homologous end-joining
416329 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
416329 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gga03032
]
416329 (RAD50)
03400 DNA repair and recombination proteins [BR:
gga03400
]
416329 (RAD50)
DNA replication proteins [BR:
gga03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
416329 (RAD50)
DNA repair and recombination proteins [BR:
gga03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
416329 (RAD50)
BRCA1-C complex
416329 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
416329 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SMC_N
AAA_15
SbcC_Walker_B
DUF2703
ABC_tran
AAA_29
TolA_bind_tri
AAA_13
Motif
Other DBs
NCBI-GeneID:
416329
NCBI-ProteinID:
XP_004945072
CGNC:
5128
Ensembl:
ENSGALG00000006794
UniProt:
A0A8V0YV55
LinkDB
All DBs
Position
13:17625282..17643429
Genome browser
AA seq
1313 aa
AA seq
DB search
MAKIEKMSILGVRSFGVEDKDKQIITFFNPLTILVGPNGAGKTTIIECLKYISTGDFPPG
TKGNSFVHDPKVANETDVRAQIRLQFRDVSGELIAVQRSMVCTQKSKKTEFKTLEGVITR
TNRHGEKVSLSSKCAEIDREMISALGVSKSVLNNVIFCHQEESNWPLSEGKALKQKFDEI
FSATRYIKALETLRQVRLKQGTKVKECQTELKYLKQNKEKAQEIQDNLANREAQLSASKE
NIKSIESQLDPLKSSLAAVEKNLMEVMSLDNNVKALESRRIQMEKDNQDLQRKMEKVFQG
TDEQLKDRYHNHQRTVKEKEKRLSDCKRELDRASKECQRFNSEKSELLIERGRLQLQADR
HQEHIKVRDSLIQALSAQLELDGFEQAPFNDRQIAVFHELLKERQKSDTEAANQLMREFT
QKEAMKQEQIDKIRDRKTGLERSIDLKSDIQNKRLAELKNVKYELCQLEGSSDRIAELDR
EIVKMEHELEKAERNSNVETLEQEVQTLQNEKINLDKVLRRLDQEMEQLNLHTTTITQME
MLKKDKADKEEQIRKVKLRHSEELTLLLGYFPNKKQLEDWLHGKSTEINETRSRHALLNK
QLASAEQQKNYISAELRKKEEQLSNYEAKLFDVCGSQDFDSNLNKLQDEIEKSSKQRAVL
AGATAVYSQFITQLTEENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESEL
KKREKKRDEMIGLKPIRQTVVELQERDIPDLRNRLQTVNRDFARLKGEIEEQETLLQTVL
SEKEGANACLQDITLMERYQTDIRDVERKIAQQEAKLLGVDLNRTVLQVSQEKQAKKHLW
DTVTSKIELNQKMKQDQQNQIQELKSTVNELRAEKLQISSSVQRRQQLEEQTVELTTEVQ
SLSREIKEEKEQVFPLDATLEKLQQDKEDLINKRTASNKEIQEKMNAIKEKVKDINKYTK
EIENYIQQGKEEYKKQKECELDEVNSQLVACEKQKEKISKEMEIIRQDIDTQKIQERWLE
DNLTLRERNKELKGVEDNIKELVKKMGEMKVPQLKNEQKHLEEKIEALKRNHHVALGRQR
GFEEEIVRFKKELRESQFKDAEEKHREMMIVMRTTELVNKDLDIYYKALDKAIMTFHSMK
MQEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRG
RCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQ
RNFQLLVITHDEDFVELLGRSEYVETFYRIRKNIDQCSEIMKCSVSSLGSYVH
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atggccaagattgagaaaatgagcatcctgggagtgaggagtttcggtgtggaggacaaa
gacaaacagattatcaccttctttaatcccctgaccattctggtgggacccaacggcgca
gggaaaacgaccatcattgagtgccttaaatacatctccactggagatttccctcctggc
accaaaggaaactcgtttgttcatgacccaaaggttgctaatgaaacagatgtgagagct
cagattcgattacagtttcgagatgttagtggagagctcatagctgtgcaacgatccatg
gtttgtacccagaaaagcaagaaaacagaatttaaaacgcttgaaggggtcattaccaga
acaaacaggcatggtgagaaggtcagtctcagttccaagtgtgcagaaattgatcgagag
atgatcagtgcccttggtgtttccaagtcagtgcttaacaatgtcattttctgccatcaa
gaggaatccaactggccgttaagcgaagggaaggccctgaaacaaaaatttgatgagatc
ttctcagcaacaaggtatattaaagcactggaaactctccgtcaagtacggctgaaacaa
ggcacgaaagtgaaagagtgtcagacagaactgaaatacctgaaacagaataaagaaaaa
gcccaggaaatccaggacaatcttgccaacagagaagctcaactgtctgcttctaaggag
aatataaaatctatcgagagtcagctcgaccccttaaagagttctctggcagcagttgag
aagaatctcatggaagttatgtcgctggacaataacgtgaaagccctggagagcaggagg
atacagatggagaaggataatcaagatctgcaacggaaaatggaaaaggtttttcaagga
acagatgagcagctcaaggatagataccacaaccaccagagaacagtgaaggaaaaggag
aagaggttgtcagactgtaagcgggaattagatagagcctctaaagaatgccagaggttt
aacagtgagaagtcagaactacttattgaacgaggtcgtctacagctgcaagcagatcgt
caccaagagcacatcaaagtgagggattccttaatccaggctttgtcagcacagctggaa
ttggatggctttgagcaagcaccttttaatgacagacagattgctgtttttcacgagtta
ttgaaagagaggcagaagagtgacacagaagctgcaaatcagttaatgagagagttcacg
cagaaagaagcaatgaagcaagaacagatcgataaaataagagataggaaaactggatta
gagagaagcattgacctgaaatcagacattcaaaataagaggctggctgaactgaagaac
gtgaaatatgaactgtgtcagttggagggctcttcagacagaatagcagagttggatcgg
gagatcgtaaagatggagcatgaactggagaaagctgagagaaacagcaacgtggaaact
ctggaacaggaagtgcaaacgctgcagaacgagaagatcaacctggacaaagttcttcgg
aggttggatcaggagatggagcagctgaatctacataccacaactattacccagatggag
atgctgaagaaagacaaagcagacaaagaggagcagattagaaaagtaaaattgagacat
tctgaagagctgacactactgctgggatattttcctaacaaaaaacaacttgaagactgg
cttcatggcaaaagcactgagattaacgagacaaggagtagacatgccctgctaaacaaa
cagctggcatcagcagaacaacagaaaaattatatcagtgctgaactaagaaaaaaagaa
gaacagttgtccaactatgaagcaaagctttttgatgtttgtggaagccaagattttgac
agtaacctgaacaaactgcaagatgagattgaaaagagttcaaagcagcgagctgtgctt
gctggagccactgcagtttattcacagttcattacacagctgacagaggagaaccagtca
tgttgtccagtttgccaaagagtttttcaaacagaggctgaactgcaagatgtgatcagt
gatctgcagtcaaagctgcgtctcgccccagacaaactgaagtcaacagagtctgaactt
aaaaaaagagagaaaaaacgtgatgagatgataggtcttaaaccaattaggcaaactgta
gtggagctccaagaaagggacataccggacttgaggaacaggctgcagactgtgaacagg
gattttgcacgcctgaagggtgagatagaagaacaggaaacacttttgcaaacagttcta
tctgaaaaggaaggtgctaatgcatgtttacaggacataactctcatggaaaggtaccag
actgatattagggatgttgaaagaaaaattgctcagcaggaggctaagttgctaggggtc
gatttaaatagaactgttctacaagtaagccaagagaaacaagcgaaaaaacatctgtgg
gataccgttactagtaaaattgagctaaatcagaaaatgaagcaagaccagcaaaatcaa
attcaggagctgaagagtacagtgaatgaactcagagcagagaaacttcagatttccagc
agcgtgcagcgtcgtcagcaactggaggaacaaacagtggaattaaccactgaggttcag
tccttgtccagggagatcaaggaagaaaaagaacaggtatttcctctggatgcaacttta
gaaaaactgcagcaagacaaggaggatctaattaataaaaggactgcaagtaataaagaa
atacaagagaagatgaatgccataaaagagaaagttaaagatataaataagtacacgaaa
gaaattgaaaactatattcaacaaggaaaggaagaatataagaagcaaaaggagtgtgaa
cttgatgaagtaaattcccagttagttgcctgcgagaaacagaaggaaaagatcagtaaa
gagatggaaattattcgacaggatattgacactcaaaaaatccaggagagatggctggag
gataatcttactttgagggagcggaataaagagctaaaaggagtcgaagacaatataaaa
gaacttgtaaagaagatgggagaaatgaaagtcccacagctgaaaaatgaacaaaaacat
ttagaggagaaaatagaagctctgaaaagaaaccatcacgttgcactgggccgacagcgt
ggatttgaggaagagatagttcggtttaaaaaggagcttcgagagtcacagttcaaggat
gcagaggaaaagcacagggagatgatgattgtcatgagaacaacagagctggtgaacaaa
gatttggacatttattacaaggccctggataaagcaataatgacatttcatagcatgaag
atgcaagaaattaacaaaataatccgcgacctttggcgaagtacctacagaggacaagat
attgaatatatagaaattcgttctgatgcagacgaaaacgtttcagcatctgataaaaga
agaagttacaattacagagtagtgatgataaagggagatacggcgctggatatgcgagga
agatgcagtgctgggcaaaaggtacttgcttctcttatcatccgtctcgctctggcagaa
acattctgcctcaattgtggcatattggcactggatgagcctaccaccaatcttgatcga
gaaaatatagagtctcttgcacatgcccttgtggagataataaagagccgctcacgacag
cgaaactttcagctcctggtgataactcatgatgaagactttgtggaactccttggtcgt
tctgagtacgtggaaaccttctacaggatcaggaagaacattgatcagtgctccgagatc
atgaagtgcagcgtcagctcccttggctcatacgttcattaa
DBGET
integrated database retrieval system
