Gallus gallus (chicken): 416431
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Entry
416431 CDS
T01006
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gga01002
]
416431 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gga04121
]
416431 (USP42)
Enzymes [BR:
gga01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
416431 (USP42)
Peptidases and inhibitors [BR:
gga01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
416431 (USP42)
Ubiquitin system [BR:
gga04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
416431 (USP42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
416431
NCBI-ProteinID:
XP_015149747
CGNC:
2460
Ensembl:
ENSGALG00000003378
UniProt:
A0A8V0ZM62
LinkDB
All DBs
Position
14:complement(951594..970918)
Genome browser
AA seq
1323 aa
AA seq
DB search
MTIVKPKSSKSKKSSSRRSGKSKKPSAKNMKSRTANWGRIPPAKDPNQVSVNQGRGGAIY
CRSSEKSKPFALRDLVINDGIAPPQRILFPPEKICMDWQQTQNVGVGLFNLGNTCFINSA
LQCLTYTPPLANYMLSLEHTQSCNYQGFCMMCTMETHINRVLCCAHDAIKPAFVVHELKR
IGKHFRFGAQEDAHEFLRFTVDAMQQACLHGCTILDRSSQATTIIHQIFGGFLRSRVKCL
NCKAVSDTYEAFLDIPLDIKTVSSVTKALEQFVKPEQLDGENCYKCSKCKKMVPASKRFT
IHRSSNVLTISLKRFANFTGGKINKEVKYPEYLDLRAYMSQSIGEPLIYALYAVLVHSGV
NSHAGHYFCFIKAADGLWYQMNDASVVQSNIKTVLGQQAYLLFYIRRYDLTLGERAFYLP
APSYPRSFLGQRGTNSKQAGFMGPRLPPHMIKNSSRLNGNGSLKEDPNTVGVTLKRPSSA
PPTACVQNWAITRPSITDPSKKQKITISIHNKLPARQTVSQPDCLRALEEEEELNKSVPS
FTVTNSSAAESTSNASTMLFATNISEVPDEIFVEPVVNGNPKLSSDNMVSYGTESSGKPE
DESSKGLFTRNCNIISSNGILIGKVCTLQNSYSSCQNAEEERSKHELPKNDSLNGANSLD
NEPKENGLKLDDSSCQVPPVKPSEMLFPKTNGVLETMPIALSPDPQEIILDSFTYGQLNS
LSEEISVPGPQKSSENDSLMETVVMEALLVYEESRKLPCDLSCEAGNLFIQSDSETISTK
EVVAESIMTKADNAQLNINGQHKVRKRSLDTEDEFLENFESEDSDDKDKPRRSKEPDLIS
KENPLYIKGSPETEEELGQASSIKSDVECSSKKPACLDTADKCQDTKDISNNYVEVPPVN
DSSITKLDKVLESQFSRENEGPTNRNCEENKHRKKDKHIYESKKTDKEHYRRKREHSDTE
EREKQNSKPDGHSHKRRCSRSVETNKQNRRKQDYCNGNKYRSSYTERSSPDVSRNSGKYS
HYRSRSRGREQGRNRYYHSKGERTWSRERYYQDEPWRWQKCRHYNDYYYSHAKGDSRERK
FSHYNKDFDRSSQAYSRSHKDYHYKSRRPHHSLSREEDVRHFSSHRADSRHCSVPQQQSE
KYSYERHILPPVLTHLRFEDSSPKNEKQSYRKRKYADSSESETERKSRKIEKEVLDDEKM
KKYKKVKKKKKSKDKHREKDYKLYDSDFSVLHFDNDNRRRKKKKKKKKHIRKLKGFLEYL
DPRFLKKTWEKEGSCSPADCLREQYRNEGSKQPDKEGKPSSCASEIENYISTASKEYIKD
ADY
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttaagccaaaatcttctaagtctaaaaaatcctcatcgaggcgatctggt
aaatccaagaagcccagtgctaaaaatatgaagtcacgcactgcaaattggggccggata
ccacctgcaaaagatccgaaccaggtctctgtgaaccaaggacgtggaggtgctatttat
tgtaggtcatccgaaaaatctaaaccttttgcccttagagatttagtcattaatgatgga
attgctccaccacaaaggattctttttccacctgagaagatttgtatggattggcagcaa
acacaaaatgttggagttggactcttcaatcttggcaatacgtgctttattaattctgct
ctacagtgtttgacctacacacccccgttagccaactacatgctctcccttgagcacacc
cagtcgtgcaattatcaaggcttttgcatgatgtgcactatggaaactcacattaaccga
gtcctgtgttgtgctcacgatgccatcaagcctgcatttgttgtccatgaacttaaacga
attggaaaacatttccgttttggcgctcaggaagacgcgcacgagttcttacgcttcact
gttgatgctatgcagcaagcctgtttgcatggatgtaccatattagacagatcttctcaa
gcaaccaccatcattcatcaaatatttggaggatttctaagatccagagtaaagtgcttg
aactgcaaagcagtttcggatacatacgaggcattccttgatatacctctggatataaag
acagtttcatctgttaccaaagctctagaacaatttgtgaaacccgaacagctggacggt
gaaaattgctataaatgtagcaaatgcaagaagatggtgccagcatcaaagagatttaca
atacatcgctcttccaatgttctcacgatatcactgaaaagatttgcaaatttcacgggt
ggaaaaatcaacaaggaagtaaaataccctgagtatttggatcttcgagcttatatgtct
caatcaattggagaaccactcatttatgccttatatgccgttttagtacatagtggtgtc
aattctcatgccggacactatttctgcttcataaaggctgctgatggactttggtatcag
atgaatgatgcttcagtagtgcaaagtaacatcaaaacagttcttggtcagcaagcttat
ttactgttttatatcaggcgctacgatttgacacttggagaacgtgctttttacttacca
gcaccgtcttatccccgttcattccttggccagagggggactaatagtaagcaggctggc
tttatgggaccacgacttcctcctcatatgattaagaattcaagtcgtttaaatggaaat
ggatctttaaaagaggatcccaatacagttggtgtcaccttaaaaaggccatcttcagct
ccacccacagcttgtgttcaaaactgggccattaccaggccttccattactgacccatca
aaaaaacagaagatcactatcagtattcataacaaattgcctgcacgtcagaccgtgtca
cagcctgactgtctccgtgctctggaggaggaggaggagctaaacaagtctgttccttcg
ttcacagttacaaattcttctgcagcagagtctacctcaaatgcatctacaatgttattt
gctactaatatttcagaagttccggatgaaatttttgttgagccagtggtgaatggaaat
cctaaactcagctctgataacatggtctcttatggtacagaatcttcaggaaaacctgag
gacgagtcttcaaagggcttatttacaaggaattgcaacattatatcttctaatggaatt
ttgattggaaaggtctgtacactgcagaactcctattcttcgtgtcagaatgctgaagag
gaaagatccaaacatgagctgccaaaaaatgattcactaaatggtgctaatagtttagat
aatgaacctaaagaaaatggactgaaacttgatgattccagttgccaagtcccacctgtt
aaaccttccgaaatgttatttcctaaaaccaatggagtgcttgaaacaatgcctatagct
ttgtctccagaccctcaagagataatcttagattcctttacatacggccagttgaacagc
ttgtcagaggaaataagtgtccctggacctcagaaatcttctgagaacgattctcttatg
gaaacagtagtgatggaagcgctgttggtctatgaagaatccaggaaacttccctgtgac
ttgagctgtgaggctgggaatctttttattcaatcagattctgaaaccatttctaccaaa
gaagttgttgctgaaagtattatgacaaaagctgataatgcacaactcaatatcaatggt
cagcacaaggttaggaaaagatccttggacactgaagatgaattccttgaaaattttgag
tctgaagacagtgatgacaaagacaaacctagaagatcaaaagaacctgatctcatttca
aaagaaaatcctttgtatatcaaagggtctcctgagactgaagaggaattaggacaggct
tcctctataaagtctgatgttgaatgtagttctaaaaaacctgcatgtctggatactgca
gataaatgccaagatacaaaggacatatctaataactatgtagaagtaccacctgttaat
gactcttctattacaaagctggataaagttttggagagtcaattttctagagaaaatgag
ggaccaactaataggaattgtgaagaaaataagcataggaaaaaagataaacatatatat
gagtctaaaaaaactgacaaagagcactaccgaagaaaaagagaacactctgatacagag
gagagagagaagcaaaacagcaaaccagatggtcattcccacaagaggaggtgctctcgt
agtgtggaaacaaataagcaaaatcgtcgtaagcaggattattgcaatggaaacaaatac
agatcttcctataccgaaagaagcagccctgatgtcagcagaaactcagggaaatattct
cattacagatctcgaagcagaggacgagaacaaggtaggaatagatactaccattccaaa
ggagagagaacttggagcagagaaaggtactatcaagatgaaccctggagatggcaaaaa
tgcagacactacaatgattactattattctcatgcaaaaggagatagtcgagaaagaaag
ttctcccattacaataaagattttgacagatcaagtcaagcttacagcaggtcacataag
gattatcattacaaaagcagacggcctcaccactcactctctagagaggaggatgtacgt
cactttagcagccacagagcggactcccggcactgttcagtacctcagcagcaatctgag
aagtattcttatgaaagacatatacttccacctgtgttaactcatttacgttttgaggac
tcttccccaaaaaatgaaaaacaaagctacagaaaaaggaaatatgcagacagcagtgaa
agtgaaacagaaaggaaaagcagaaagatagaaaaagaggttttggatgatgaaaagatg
aaaaaatacaagaaagtcaagaagaaaaagaagtccaaagataaacatcgagagaaggat
tacaaactttatgattcggatttctctgtgctccactttgacaatgacaatcgcagacgt
aagaaaaaaaagaaaaagaagaaacacatcaggaaattgaaaggcttcttggaatattta
gatcctcgtttcctgaagaaaacatgggagaaggaaggatcttgctctcctgctgactgt
ttacgtgagcaatacagaaatgagggcagtaaacaacccgacaaggaagggaagccttct
tcctgtgccagtgaaatcgagaactacatctccactgcatccaaagagtatattaaagat
gcggattactga
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integrated database retrieval system
