Gallus gallus (chicken): 416517
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Entry
416517 CDS
T01006
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha isoform 1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
gga
Gallus gallus (chicken)
Pathway
gga03440
Homologous recombination
gga03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
416517 (TOP3A)
03460 Fanconi anemia pathway
416517 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gga03032
]
416517 (TOP3A)
03400 DNA repair and recombination proteins [BR:
gga03400
]
416517 (TOP3A)
Enzymes [BR:
gga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
416517 (TOP3A)
DNA replication proteins [BR:
gga03032
]
Eukaryotic type
DNA Topoisomerases
416517 (TOP3A)
DNA repair and recombination proteins [BR:
gga03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
416517 (TOP3A)
FA (Fanconi anemia) pathway
416517 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
416517
NCBI-ProteinID:
NP_001025807
CGNC:
3738
Ensembl:
ENSGALG00000005028
UniProt:
Q4W5X0
LinkDB
All DBs
Position
14:complement(5481750..5493655)
Genome browser
AA seq
1020 aa
AA seq
DB search
MNFQARLLASCGVRMLPQPWRGFSRAAEGPAVQRIRKVLCVAEKNDAARGIADLLSNSRM
RRREGFSKFNKIYEYDYQMFGQNVTMVMTSVSGHLLAHDFKLPFRKWHSCNPLALFDAEI
EKYCPENYVDIKRTLEREVQQCQALVIWTDCDREGENIGFEIIHVCKAVKPNLQVFRARF
SEITLHAVRRACENLTQPDQKTSDAVEVRQELDLRIGAAFTRFQTLRLQKIFPDILADQL
ISYGSCQFPTLGFVVERFKAIQAFVPEAFYKIKVTHDHEDGNVVFNWKRNRLFNHTACLV
LYHMCMEDPIATVVEVGSKPKSKWRPLPLDTVELEKLASRKLKINAKETMRIAEKLYTQG
FISYPRTETNIFPKELNLSALVQHQTQDPNWGAFAQRILDQGGPTPRNGTKSDQAHPPIH
PTKYTANLQGNEQRLYEFIVRHFLACCSQDAKGQETTVEIDIANERFVAQGLMILARNYL
EVYPYEKWSDKVIPLYQKGSRFQPTTVEMVDGETSPPLLLTEADLIALMEKHGIGTDATH
AEHIETIKTRMYVGLTADQRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEG
KKDKSIVLHQQVQKYKQVFIEAVARANKLDQALAQYFGEATEIVEQEEVYPAMPVSIRKC
PQCNNDMVLKTKKNGGFYLSCTGYPACKTAVWFPDFVLDVAKDESICAVCKPHPVHRLKF
KFKRGSVPPTMPLDFVGCIGGCDQMLKELLDLRYSHRSSQSGQSASQQANQLQVNNSFNR
ANSENRRVGGTTNMATGHLLYLSSTRAPRPAPSAAPDDGNNAVVCNCGNEAMLLTVRKEG
PNQGRQFYKCSANTCNFFLWSDQQSEDRSNAAPRGSAPPRAFGARGPANSQRPGGKRGPE
HFGSSNNSSSGDSTVCRCDQPAVTRTVQKDGPNKGRQFHTCSKPREQQCGFFQWADENVA
PGASGDFSFNHFGSSEYSRELGSKAKRPSNLSHGATAKKPRTCSICHQPGHTKKTCPLDH
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgaactttcaagccaggcttcttgctagctgtggggtcaggatgctgcctcagccctgg
cgcggcttctcacgggctgcagagggtccagcagtgcagagaatccggaaggtcctgtgt
gtggctgagaagaatgatgctgcccgaggaattgcagatctgctgtccaacagcagaatg
cggcggagagaagggttttccaagttcaacaagatctacgaatatgactaccagatgttt
ggccagaacgttactatggtgatgacatccgtgtcaggacacttgttggctcatgatttc
aagctgccatttcgcaaatggcatagctgtaaccctctagctctctttgatgctgaaatc
gagaaatattgtccagagaattatgtggatattaagagaaccctcgaacgagaagtccag
caatgccaagctctggtcatctggactgactgtgatcgggaaggagagaacatcggtttt
gagatcattcatgtttgcaaagctgtaaagccaaacctccaggtattccgagcacgtttt
tcagagattacacttcatgctgtcagaagggcctgtgagaatctcacccaaccagatcaa
aaaactagtgatgctgttgaagtcaggcaggagctggacctcaggataggtgctgctttc
accagattccagaccctgaggctccagaagatcttccctgatattttagcagatcagctg
atcagctacggcagttgccagttcccaactctggggtttgtagttgagcgctttaaagcc
atccaagcctttgtccctgaagccttctataaaatcaaagtgacacatgatcatgaagat
ggcaatgtggtcttcaactggaagaggaatcggctctttaatcacacagcatgcctggtc
ctttaccacatgtgtatggaggatcctattgccactgttgttgaggttggaagcaagcca
aagagcaaatggaggcccctgcccctggacactgtggaacttgagaagttggcttctcgc
aaactgaaaataaacgcaaaggaaaccatgagaatagcagaaaaactctatactcaaggg
tttattagctatccccgaacagagaccaatattttccccaaggagctgaacctctctgcc
ttagtacagcatcaaacacaggaccccaactggggagcatttgcacagaggatcttggat
cagggtgggccaacccctcggaatggaaccaaatcagatcaggctcaccctcccattcac
cccacaaaatacactgctaacctgcagggcaatgaacagagactatatgaattcattgtg
cgccatttcttggcttgctgctctcaagatgccaagggacaggaaacaactgtggagatt
gacattgctaacgagcgattcgttgctcaaggacttatgatcctggcccgaaattatctg
gaagtttatccgtatgagaagtggagtgacaaggttatcccactgtatcagaaagggtct
cgctttcagcccactacagtggagatggtggatggggaaaccagccctccattgctcctc
acagaagcggatctcattgcactcatggagaaacatggcattgggactgatgccactcac
gctgagcacattgagacaattaagacacggatgtacgtggggcttacagcagatcagagg
ttcctcccaggccacctgggaatggggctggttgaaggctatgattctatgggctacgag
atgtccaagcctgaccttcgagctgagctggaggctgatctgaagctgatctgtgagggg
aagaaagacaaatctatagtgttgcaccagcaagtccaaaagtataaacaagtcttcatt
gaggctgtggccagagccaacaagctggaccaggccctggctcagtattttggagaagcc
acagaaattgtagagcaagaggaagtctacccagcaatgcctgtttccattcggaagtgt
ccccagtgcaacaatgacatggtcctgaagaccaagaagaacggcgggttctatctcagc
tgcacgggatatccagcttgtaaaactgcggtctggtttcctgattttgtgctggatgtg
gccaaggacgagagcatctgtgctgtgtgtaaaccacatccagttcacagactgaagttt
aaatttaagagaggcagtgttccacccacaatgcccctggattttgttggctgcattgga
ggatgcgatcagatgctgaaagagctcttggacctgaggtactcacacagatcatcccaa
tccggacagtcagccagccagcaggccaaccagttgcaggtgaacaactcctttaacaga
gcaaacagtgaaaacaggcgtgtgggaggtaccacaaacatggcaacaggacatctgctt
tacttgagttcaacaagagcacccaggcctgctccttcagctgctccagatgatgggaat
aatgcagtggtgtgcaactgtgggaacgaagccatgctgttaactgtgcgcaaagaaggg
cccaatcaaggcagacagttttacaaatgcagtgccaatacctgcaactttttcctctgg
tctgatcaacagtcagaggacagaagcaatgcagctccgcggggctctgcaccaccccgg
gcctttggggcaaggggccctgcaaattctcagagaccaggaggaaagagaggcccagaa
cactttggaagcagcaacaactccagttcaggagacagcacagtctgcaggtgtgaccag
ccagctgtcacacgcacggtccaaaaagatggccctaacaaagggcggcagttccacacg
tgctcaaaacccagagagcagcagtgcggcttcttccagtgggctgatgaaaacgtggct
ccaggagcttctggagatttctcttttaaccactttgggagcagtgaatactcaagggag
ttgggaagtaaagctaagagaccaagcaatctctcccacggagcaactgccaagaaacca
cggacctgtagcatttgccaccagcctggccacactaagaaaacttgtcctctagatcac
tga
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