Gallus gallus (chicken): 416520
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Entry
416520 CDS
T01006
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
gga
Gallus gallus (chicken)
Pathway
gga00260
Glycine, serine and threonine metabolism
gga00630
Glyoxylate and dicarboxylate metabolism
gga00670
One carbon pool by folate
gga01100
Metabolic pathways
gga01200
Carbon metabolism
gga01230
Biosynthesis of amino acids
gga01240
Biosynthesis of cofactors
gga04981
Folate transport and metabolism
Module
gga_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
416520 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
416520 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
416520 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
416520 (SHMT1)
Enzymes [BR:
gga01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
416520 (SHMT1)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
416520
NCBI-ProteinID:
XP_414824
CGNC:
3751
Ensembl:
ENSGALG00000005046
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Position
14:complement(5503191..5508827)
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AA seq
580 aa
AA seq
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MGAGPGAAPRLGQGQPACRQRRRPRPSAGHCEEGRRRSAPRIGRRVVADFVVRALIGREL
EGWDPAAYARSAGCRGTAERAGIGIRIGGIRGSGQMANVAQGAGSLPSAELWASHSKMLL
EPLDSNDPEVYNIIKKEKQRQRLGLELIASENFASCAVLEALGSCLNNKYSEGYPGQRYY
GGTEFVDELERLCQKRALQAFRLDPQKWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDL
PDGGHLTHGFMTDKKKISATSVFFESMPYKVNPKTGYIDYDKLEENARLFHPKLIIAGVS
CYSRNLDYARMRQIANANSAYLMADMAHISGLVAAGVVPSPFEHCDVVSTTTHKTLRGCR
AGMIFYRKGTRSTDPKTGKETLYNLESLINQAVFPGLQGGPHNHAIAGIAVALQQAMTPE
FKAYQQQVVANCKTLAAALMEMGYDIVTGGSDNHLILLDLRNRGTDGGRAERVLELCSIA
CNKNTCPGDVSALRPSGLRFGTPALTSRGFRQDDFRTVARYIHKGIELTLRVQKDMNPKA
TLKEFKEKLEEEKYQGELKALKEEVEAFAATFPLPGLPVL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcagggcccggcgcagccccccggctcggccaaggtcaacccgcgtgccggcag
cgccgccgaccccgcccgagcgcgggtcattgcgaagaggggaggaggcggagcgcaccg
cggattggacgaagagttgtcgcggatttcgtcgttcgggcgctgattggtcgagagctg
gaagggtgggacccggcagcctatgctaggagcgcgggctgccgcgggacggctgagcgg
gccgggatcgggatccgtatcggtggcatcagaggcagtggacagatggcaaatgtggca
cagggtgctgggagcctccccagcgcagagctctgggcctcccacagtaagatgctgctg
gagccactcgacagcaatgaccccgaggtgtacaacatcatcaagaaggagaagcagcgg
cagaggctggggctggagctgattgcatcagagaactttgcgagctgcgcagtcctggag
gcactgggatcctgcttgaacaataaatattctgaaggctaccctggacagaggtactat
ggtgggaccgagttcgtagatgagctggaaaggctgtgccagaagcgagccctgcaggca
ttccggctcgacccccaaaagtggggtgtcaacgtccagccctactcagggtcacccgct
aactttgcggtgtacacggccttggtggagccccatggcagaatcatggggctagacctg
cctgacgggggccatctcacccatgggttcatgacggacaagaagaagatctctgccacc
tctgtcttctttgagtccatgccctacaaggtgaatcccaagactggttacattgattac
gacaaacttgaggagaatgctcgcctgttccaccccaagctgattatagcaggtgtcagt
tgctactcacgcaacttggactatgcccgcatgcgacagattgccaacgccaacagcgcc
tacctgatggccgacatggcccatatcagcgggctggtggctgccggtgtcgtgccctca
ccatttgaacactgcgacgtcgtctccaccaccacccacaagactttgaggggctgcagg
gccggcatgatcttctatcgcaaaggcacccgcagcacggaccccaagacaggaaaggaa
acactctacaacctggagagcctcatcaaccaagcagtcttccctgggctgcagggaggg
ccacacaaccatgccatcgcagggatcgctgtggcactgcagcaggccatgactcctgag
ttcaaggcttaccagcagcaggtggtggccaactgcaagacactggcagcagcactgatg
gagatgggctatgacattgtcacagggggctctgacaaccacctcattctcctggacctg
cgcaacagaggcactgatggtggccgggccgagcgggtgctggaactctgctccatcgcc
tgcaacaagaacacgtgccctggtgatgtcagtgcccttcgtcccagcggtctgcgtttc
gggacaccagctctcacctcccgtggctttcggcaggatgatttccgcacggtggctcgg
tacatccacaaaggcattgagctgacgctgcgcgtgcagaaggacatgaaccccaaggcg
acgttgaaagaattcaaggagaaactggaggaggaaaaataccagggagagctaaaggca
ctgaaggaagaggtggaggcattcgcagcaaccttcccgctcccaggactgccagtcctg
taa
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